Factsheet for PGSC0003DMT400057021

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
vacuole 1
mitochondrion 1
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400043552
PGSC0003DMT400070360

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47750.1	PGSC0003DMT400043552	AT5G04510.1	16973627
AT5G47750.1	PGSC0003DMT400070360	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g065710.2.1	Tomato	plastid	98.18	98.18
PGSC0003DMT400022397	Potato	plastid	84.6	83.36
GSMUA_Achr5P22450_001	Banana	cytosol	47.19	81.9
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	40.73	78.1
VIT_19s0015g00770.t01	Wine grape	extracellular	77.65	76.76
KRH36626	Soybean	cytosol	75.33	74.84
Bra024918.1-P	Field mustard	cytosol	67.88	74.01
CDY17708	Canola	cytosol	67.88	74.01
KRH11623	Soybean	cytosol	72.19	73.77
AT5G47750.1	Thale cress	cytosol, plastid	70.53	72.7
CDX77795	Canola	cytosol	68.71	72.68
PGSC0003DMT400050818	Potato	cytosol	73.01	72.65
Os09t0258500-01	Rice	cytosol, plasma membrane	66.06	70.37
Os08t0491200-01	Rice	cytosol	69.04	70.2
GSMUA_Achr4P06290_001	Banana	cytosol	53.64	69.83
GSMUA_Achr1P09470_001	Banana	cytosol	54.14	69.72
Os09t0478500-01	Rice	cytosol	66.72	69.13
HORVU5Hr1G052250.1	Barley	cytosol	65.4	68.82
TraesCS5D01G174500.1	Wheat	cytosol	65.23	68.76
TraesCS5A01G170100.1	Wheat	cytosol	65.23	68.76
TraesCS5B01G166900.1	Wheat	cytosol	65.07	68.59
HORVU5Hr1G071250.1	Barley	cytosol	65.4	68.46
TraesCS5A01G253500.1	Wheat	cytosol	65.23	68.28
TraesCS5D01G261300.1	Wheat	cytosol	65.07	68.11
KXG35854	Sorghum	cytosol	65.07	68.11
Zm00001d005135_P001	Maize	cytosol	64.4	68.01
TraesCS5B01G252500.1	Wheat	cytosol	64.9	67.94
GSMUA_AchrUn_...	Banana	cytosol	55.46	67.68
Zm00001d005976_P008	Maize	cytosol	64.57	67.59
Zm00001d020858_P001	Maize	cytosol	64.4	67.42
TraesCS7D01G218000.1	Wheat	cytosol, plastid	64.07	66.95
TraesCS7B01G123400.1	Wheat	cytosol	64.07	66.95
Os02t0725000-01	Rice	cytosol	65.07	66.84
EES15458	Sorghum	cytosol	66.72	66.83
TraesCS7A01G216200.1	Wheat	cytosol, plastid	63.91	66.78
Os06t0291600-01	Rice	nucleus	65.07	66.72
HORVU7Hr1G043790.1	Barley	plastid	63.58	66.21
GSMUA_Achr8P25360_001	Banana	cytosol	57.28	66.03
OQU85494	Sorghum	plastid	62.42	65.91
PGSC0003DMT400025008	Potato	cytosol	48.68	65.33
GSMUA_Achr7P20130_001	Banana	nucleus	56.46	65.2
GSMUA_Achr4P13100_001	Banana	cytosol	49.67	64.38
GSMUA_Achr5P04290_001	Banana	cytosol	51.99	63.05
KXG19822	Sorghum	cytosol, plastid	59.27	61.51
PGSC0003DMT400003557	Potato	cytosol, plastid	50.99	59.23
PGSC0003DMT400032816	Potato	cytosol	61.09	58.48
Zm00001d017889_P001	Maize	nucleus	35.93	55.22
PGSC0003DMT400017808	Potato	cytosol, plastid	60.1	54.5
PGSC0003DMT400053292	Potato	cytosol, plastid	38.74	50.43
PGSC0003DMT400067034	Potato	cytosol	58.11	50.14
PGSC0003DMT400068252	Potato	nucleus	38.08	48.63
PGSC0003DMT400050201	Potato	cytosol	36.59	47.94
PGSC0003DMT400068494	Potato	cytosol	52.48	45.09
PGSC0003DMT400079838	Potato	nucleus	32.95	41.37
PGSC0003DMT400068291	Potato	cytosol	50.5	36.4
PGSC0003DMT400018337	Potato	cytosol	49.5	35.05
PGSC0003DMT400006862	Potato	cytosol	48.51	28.73
PGSC0003DMT400072395	Potato	nucleus	47.68	28.66

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102578413	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M1C087	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400022165	PGSC:PGSC0003DMG400022165
EnsemblPlants:PGSC0003DMT400057021	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF112	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00029507B9	RefSeq:XP_006346118.1	RefSeq:XP_006346119.1
RefSeq:XP_006346120.1	RefSeq:XP_006346121.1	SEG:seg	:	:	:

Description

Serine/threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400022165]

Coordinates

chr7:-:55751138..55756434

Molecular Weight (calculated)

66280.6 Da

IEP (calculated)

9.146

GRAVY (calculated)

-0.452

Length

604 amino acids

Sequence
(BLAST)

001: MASTPSSKSL AEKLNKTTGN QTTERSSRRS TPSQVPKNNK LEIATSKERE VVSKQLVVES TVSQKSQSSQ PKGSSNSLAD KFDSNLYLGN SKYSASGVGS
101: MPTEAKGSQG TADQERKNSI KDSSASAKVS DGASSIAKTS GSAKISDRAD FLESGKSSIC RGSTGTDVSE ESTSSSLSSS VNKPHKANDS RWEAIQAIRT
201: KDGALDLRHF RLLKKLGSGD IGSVYLSELC GTKCYFAMKV MDKASLASRK KLLRAQTERE ILQSLDHPFL PTLYSHFETE KFSCLVMEFC PGGDLHTLRQ
301: RQPGKHFSEQ AVKFYVAEVL LSLEYLHMLG IVYRDLKPEN VLVREDGHIM LSDFDLSLRC AVSPTLVKST SLEGEPLRKN SAYCVQPACI EPSCIQPSCA
401: VPTTCFGPRL FSSKSKKEKK SKNEIGNQVS PLPELMAEPT GARSMSFVGT HEYLAPEIIK GEGHGSAVDW WTFGIFLYEL LFGKTPFKGS GNRQTLFNVV
501: GQPLRFPETP VVSFSARDLI RGLLVKEPQH RLAYKRGATE IKQHPFFEGV NWALIRCASP PEIPRPVEFE RISVPPAAST SEKGVAGTVP YQKNSDNYLE
601: FDFF

Best Arabidopsis Sequence Match ( AT2G44830.2 )
(BLAST)

001: MLEMERVAEL KRLPSKGPVS GHLSRRPYLD FETRDAPGMH LESLRERAAR YNTGRSVNPT TTLGRELSQV LNVHREDMMM TQFGGNMNDF QEFEPVVSSV
101: RTMKAKYPLL EIEEIGAADD DVTCKGSNDM SEEAGSSSFR GVSHPPEPDD MDLITTVYVP ISEKNKPDSV CLMKSMSTTK GPFIEDISLC VPPKKPSPRV
201: LSPAESIVEE PATSLSPFSV ARASQNTENS LLPPDSDKEC VWDASLPPST NVSPHSSSVE SMNLARAMSI ANSSSATSTT QRSDVVLSMD KNYFDRSISM
301: VLDSFESTKT SASRASDSSG LSEESSWSNF TGSLNKPHKG NDPWWNAILA IRTRDGILGM SHFKLLKRLG CGDIGSVYLA ELSGTRCHFA VKVMDKASLE
401: DRKKLNRAQT ERDILQLLDH PFLPTLYTHF ETDRFSCLVM EYCPGGDLHT LRQRQPGKHF SEYAARFYAA EVLLALEYLH MLGVVYRDLK PENVLVRDDG
501: HIMLSDFDLS LRCAVSPTLI KTFDSDPSRR GAFCVQPACM EPTSACIIQP SCFLPRSIFP NKNKKNKSRK TQADFFKSHS GSLPELVAEP NTRSMSFVGT
601: HEYLAPEIIK GEGHGSAVDW WTFGIFVHEL LYGKTPFKGS GNRATLFNVV GEQLKFPESP ATSYAGRDLI QALLVKDPKN RLGTKRGATE IKQHPFFEGV
701: NWALIRCSTP PEVPRQMETE PPPKYGPIDP VGFGSNSKRM MGPPAVSAAA ADTKSGGKFL DFEFF

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IV25]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.