Factsheet for GSMUA_Achr4P13100_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
vacuole 1
mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr5P26030_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47750.1	GSMUA_Achr10P...	AT5G04510.1	16973627
AT5G47750.1	GSMUA_Achr5P26030_001	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P22450_001	Banana	cytosol	53.43	71.55
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	47.85	70.79
GSMUA_Achr4P06290_001	Banana	cytosol	69.31	69.61
GSMUA_Achr1P09470_001	Banana	cytosol	68.88	68.44
GSMUA_Achr5P00910_001	Banana	extracellular	39.48	65.02
GSMUA_Achr8P25360_001	Banana	cytosol	71.89	63.93
GSMUA_AchrUn_...	Banana	cytosol	67.17	63.23
GSMUA_Achr5P04290_001	Banana	cytosol	65.67	61.45
GSMUA_Achr3P16430_001	Banana	cytosol	42.27	56.77
GSMUA_Achr7P20130_001	Banana	nucleus	59.87	53.35
GSMUA_Achr6P17280_001	Banana	cytosol, plastid	33.26	52.72
Bra024918.1-P	Field mustard	cytosol	62.45	52.53
CDY17708	Canola	cytosol	62.45	52.53
CDX77795	Canola	cytosol	64.16	52.36
VIT_19s0015g00770.t01	Wine grape	extracellular	67.6	51.55
GSMUA_Achr10P...	Banana	cytosol, plastid	34.98	50.78
OQU85494	Sorghum	plastid	62.23	50.7
TraesCS7B01G123400.1	Wheat	cytosol	62.66	50.52
TraesCS7A01G216200.1	Wheat	cytosol, plastid	62.45	50.35
Os06t0291600-01	Rice	nucleus	63.52	50.25
TraesCS7D01G218000.1	Wheat	cytosol, plastid	62.23	50.17
Solyc07g065710.2.1	Tomato	plastid	64.59	49.83
AT5G47750.1	Thale cress	cytosol, plastid	62.66	49.83
HORVU7Hr1G043790.1	Barley	plastid	62.02	49.83
VIT_10s0116g00440.t01	Wine grape	plastid	66.09	49.68
PGSC0003DMT400057021	Potato	plastid	64.38	49.67
Os02t0725000-01	Rice	cytosol	62.45	49.49
Solyc10g005770.2.1	Tomato	plastid	64.81	49.27
PGSC0003DMT400022397	Potato	plastid	64.81	49.27
KRH36626	Soybean	cytosol	64.16	49.18
KXG19822	Sorghum	cytosol, plastid	59.87	47.94
GSMUA_Achr5P12590_001	Banana	cytosol	54.29	47.74
KRH11623	Soybean	cytosol	60.3	47.55
GSMUA_AchrUn_...	Banana	cytosol	53.22	47.42
GSMUA_Achr1P00540_001	Banana	cytosol	52.79	46.95
GSMUA_Achr7P06890_001	Banana	cytosol	54.08	46.67
GSMUA_Achr2P19230_001	Banana	cytosol	46.57	46.17
GSMUA_Achr10P...	Banana	nucleus	39.27	44.53
GSMUA_Achr7P09970_001	Banana	nucleus	40.34	44.44
GSMUA_Achr7P01120_001	Banana	nucleus	36.05	39.72
GSMUA_Achr5P02480_001	Banana	nucleus	35.19	35.19
GSMUA_Achr5P06950_001	Banana	cytosol, mitochondrion	48.71	33.24
GSMUA_Achr4P21830_001	Banana	cytosol	30.69	32.21
GSMUA_Achr4P18040_001	Banana	cytosol	31.12	32.15
GSMUA_Achr10P...	Banana	cytosol	46.57	31.36
GSMUA_Achr11P...	Banana	cytosol	45.71	29.71
GSMUA_Achr6P13320_001	Banana	cytosol	45.28	29.06
GSMUA_Achr8P16090_001	Banana	nucleus	45.28	27.95

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G13100_001
EnsemblPlants:GSMUA_Achr4P13100_001	EnsemblPlants:GSMUA_Achr4T13100_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0SNH5	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF112	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295450F	SEG:seg	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G13100_001]

Coordinates

chr4:-:9772753..9780088

Molecular Weight (calculated)

52272.3 Da

IEP (calculated)

7.729

GRAVY (calculated)

-0.445

Length

466 amino acids

Sequence
(BLAST)

001: MLCWSTTRHC PVSGLVTTST IPKPLFEEQH KMPGGQDVEP SSRQPSPLQM PKPSRPGPNT PSRLPKLVQE DTPMQRTTEV LECQKSDHVH KGPVNSQVES
101: GKNSTCRASA SSDVSDESSG SNISSTINKP HKANDSRWEA IQVIRARDGV LELAGTKCYF AMKVMDKISL ASRRKLLRAQ MEREILQCLD HPFLPTLYTH
201: FESEKFSCLV MEYCPGGDLH TLRQRQPGKY FSEQAVKFYI AEVLLALEYL HMLGIIYRDL KPENVLVRED GHIMLSDFDL SLRCTVSPTL IKSSNPDSDS
301: FRRNNPAYCP TDARSMSFVG THEYLAPEII KGEGHGSAVD WWTFGIFLYE LLFGKTPFKG SGNRATLFNV IGQPLRFPES PVQHPFFEGV NWALIRCASP
401: PEVPKHVSIE RFMGTVASTS QKSNATSGKG SDNYLEFDFF YFGSRKLLDE AMGGFYQAEQ IPGSRR

Best Arabidopsis Sequence Match ( AT5G55910.2 )
(BLAST)

001: MMASKTPEGS LTNSSQSMSI NTLADQVSSS LSFADPSSDG KTGNSKINEQ GESGKSSTCR PSTSSDISDE STCSSFSSSI NKPHKANDVR WEAIQAVRTK
101: HGGLGLNHFR LLKRLGCGDI GTVHLAELNG TRCYFAMKVM DKTALASRKK LLRAQTEREI LQCLDHPFLP TLYSHFETEK FSCLVMEFCP GGDLHTLRQR
201: QPGKRFTEQA AKFYVAEVLL AMEYLHMLGI IYRDLKPENV LVRDDGHVML SDFDLSLRCT VSLSIVRSAN VGSEGLSKNS VSCSQQPACI QQPSCISMAP
301: TSCFGPRFFS SKSKKDKKPK TENGNHQVTP LPELVAEPTG ARSMSFVGTH EYLAPEIIKG EGHGSAVDWW TFGIFLYELL FGKTPFKGSG NRATLFNVVG
401: QPLRFPESPV VSFAARDLIR SLLVKEPQHR LAYKRGATEI KQHPFFEGVN WALVRCASPP EIPKPVDLEA LNPTPTVPAA ASSSVRSDQS NYLEFDFF

Arabidopsis Description

D6PKSerine/threonine-protein kinase D6PK [Source:UniProtKB/Swiss-Prot;Acc:Q9FG74]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.