Factsheet for GSMUA_Achr4P18040_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr5P26030_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53700.1	GSMUA_Achr10P...	AT5G04510.1	16973627
AT1G53700.1	GSMUA_Achr5P26030_001	AT5G04510.1	16973627
AT3G14370.1	GSMUA_Achr10P...	AT5G04510.1	16973627
AT3G14370.1	GSMUA_Achr5P26030_001	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P21830_001	Banana	cytosol	77.83	79.05
Os03t0253200-01	Rice	nucleus	57.65	51.18
TraesCS4D01G222200.1	Wheat	nucleus	58.76	51.16
TraesCS4B01G221800.1	Wheat	nucleus	58.54	51.06
TraesCS4A01G082200.1	Wheat	nucleus	58.31	50.67
HORVU4Hr1G062610.1	Barley	nucleus, vacuole	57.65	49.52
EER95166	Sorghum	nucleus	56.98	48.95
Zm00001d028447_P001	Maize	nucleus	56.76	48.39
KRH43840	Soybean	cytosol	48.34	47.19
KRH13630	Soybean	nucleus	48.78	46.03
VIT_19s0027g00020.t01	Wine grape	nucleus, plastid	48.12	45.78
Solyc07g056400.1.1	Tomato	nucleus	47.67	44.51
PGSC0003DMT400079838	Potato	nucleus	47.23	44.28
AT1G53700.1	Thale cress	cytosol	46.56	44.12
CDX98447	Canola	nucleus	46.34	44.09
GSMUA_Achr5P00910_001	Banana	extracellular	27.49	43.82
GSMUA_Achr10P...	Banana	nucleus	39.69	43.55
CDX97569	Canola	nucleus	46.12	43.42
Bra027344.1-P	Field mustard	nucleus	46.12	43.42
AT3G14370.1	Thale cress	nucleus	46.12	43.33
Bra041025.1-P	Field mustard	nucleus	47.23	43.29
CDY67737	Canola	nucleus	47.23	43.29
GSMUA_Achr7P01120_001	Banana	nucleus	40.58	43.26
CDY30659	Canola	nucleus	46.78	42.97
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	29.71	42.54
GSMUA_Achr6P17280_001	Banana	cytosol, plastid	27.72	42.52
GSMUA_Achr10P...	Banana	cytosol, plastid	29.27	41.12
GSMUA_Achr7P09970_001	Banana	nucleus	38.14	40.66
GSMUA_Achr5P22450_001	Banana	cytosol	29.93	38.79
GSMUA_Achr3P16430_001	Banana	cytosol	29.49	38.33
GSMUA_Achr5P02480_001	Banana	nucleus	39.25	37.98
GSMUA_Achr1P00540_001	Banana	cytosol	37.69	32.44
GSMUA_Achr1P09470_001	Banana	cytosol	33.26	31.98
GSMUA_AchrUn_...	Banana	cytosol	36.81	31.74
GSMUA_Achr5P12590_001	Banana	cytosol	37.25	31.7
GSMUA_Achr7P06890_001	Banana	cytosol	37.92	31.67
GSMUA_Achr4P06290_001	Banana	cytosol	32.37	31.47
GSMUA_Achr4P13100_001	Banana	cytosol	32.15	31.12
GSMUA_Achr2P19230_001	Banana	cytosol	32.37	31.06
GSMUA_AchrUn_...	Banana	cytosol	33.04	30.1
GSMUA_Achr7P20130_001	Banana	nucleus	34.81	30.02
GSMUA_Achr5P04290_001	Banana	cytosol	32.59	29.52
GSMUA_Achr8P25360_001	Banana	cytosol	32.59	28.05
GSMUA_Achr10P...	Banana	cytosol	36.36	23.7
GSMUA_Achr5P06950_001	Banana	cytosol, mitochondrion	34.15	22.55
GSMUA_Achr11P...	Banana	cytosol	34.37	21.62
GSMUA_Achr6P13320_001	Banana	cytosol	34.59	21.49
GSMUA_Achr8P16090_001	Banana	nucleus	34.37	20.53

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr4G18040_001
EnsemblPlants:GSMUA_Achr4P18040_001	EnsemblPlants:GSMUA_Achr4T18040_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M0SPW7	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF82	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000295D425	SEG:seg	:	:

Description

CsPK3 [Source:GMGC_GENE;Acc:GSMUA_Achr4G18040_001]

Coordinates

chr4:+:18585676..18587297

Molecular Weight (calculated)

49442.5 Da

IEP (calculated)

9.000

GRAVY (calculated)

-0.327

Length

451 amino acids

Sequence
(BLAST)

001: MHQEEGFSFC PPDSYSDLDS SFTSSTTSAS TLSARSSLSL PSFSTSSSSS SSSFAIKPLP RNSSDPHWSA LRAVGNLSPD GLLHLHHFRL IRPLGSGHLA
101: RVFQCRLNGF DDDRSPVEFA LKDCGDEGGK TWHVSAEARA LAEMDHPFLP TLYARLDASH YACFLIDYCP GGDLQSLLSR RRGNRLPPAA ARFYAAEVLL
201: ALEYLHALGF VYRDLKPENI LLRADGHVML SDFDLSFRSH VSPALLRQGE ELEFVAEPSS AFSRACVGTH EYLAPEVVSG SGHGSAVDWW AFGVFLYELL
301: YGRTPFKGAT KEATLRNILT REVRFPETIN GGDEAEMAKA KDLITRLLVR DPAARMGSAA GATEIKRHPF FEGLWWPLIR CVRPPVVPGP AGGPRVQAAT
401: EGSGRWLSGW RKSSNNDKIS NRKKRGTKPG LGFGFRVRSQ KKGTKERSGG A

Best Arabidopsis Sequence Match ( AT1G53700.1 )
(BLAST)

001: MEDDGYYLDT DLDLSFTSTA TDRTFTSSSA RSSLARSSLT LSFNDRLSTA TTPSTTTSSA ATTLHHRRYD PHWTSIRAAT TLSSDGRLHL RHFKLVRHLG
101: TGNLGRVFLC HLRDCPNPTG FALKVIDRDV LTAKKISHVE TEAEILSLLD HPFLPTLYAR IDASHYTCLL IDYCPNGDLH SLLRKQPNNR LPISPVRFFA
201: AEVLVALEYL HALGIVYRDL KPENILIRED GHIMLSDFDL CFKADVVPTF RSRRFRRTSS SPRKTRRGGG CFSTEVEYER EEIVAEFAAE PVTAFSKSCV
301: GTHEYLAPEL VAGNGHGSGV DWWAFGIFLY EMLYGTTPFK GGTKEQTLRN IVSNDDVAFT LEEEGMVEAK DLIEKLLVKD PRKRLGCARG AQDIKRHEFF
401: EGIKWPLIRN YKPPEIRGLV KKTKAHAGHV TAAVTPRRNK WLWWALSHLL RSKSLSKSSS KIQSNNNYYH YVGKKL

Arabidopsis Description

WAG1Serine/threonine-protein kinase WAG1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8M5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.