Factsheet for TraesCS4B01G221800.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G383400.1
TraesCS3B01G415800.1
TraesCS3D01G376500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G53700.1	TraesCS3A01G383400.1	AT5G04510.1	16973627
AT1G53700.1	TraesCS3B01G415800.1	AT5G04510.1	16973627
AT1G53700.1	TraesCS3D01G376500.1	AT5G04510.1	16973627
AT3G14370.1	TraesCS3A01G383400.1	AT5G04510.1	16973627
AT3G14370.1	TraesCS3B01G415800.1	AT5G04510.1	16973627
AT3G14370.1	TraesCS3D01G376500.1	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G222200.1	Wheat	nucleus	98.07	97.88
TraesCS4A01G082200.1	Wheat	nucleus	97.29	96.92
HORVU4Hr1G062610.1	Barley	nucleus, vacuole	94.58	93.14
Os03t0253200-01	Rice	nucleus	85.11	86.61
EER95166	Sorghum	nucleus	83.75	82.48
Zm00001d028447_P001	Maize	nucleus	82.79	80.91
GSMUA_Achr4P21830_001	Banana	cytosol	50.68	59.01
GSMUA_Achr4P18040_001	Banana	cytosol	51.06	58.54
KRH43840	Soybean	cytosol	41.59	46.54
VIT_19s0027g00020.t01	Wine grape	nucleus, plastid	41.2	44.94
KRH13630	Soybean	nucleus	40.62	43.93
AT1G53700.1	Thale cress	cytosol	39.85	43.28
PGSC0003DMT400079838	Potato	nucleus	40.23	43.24
Solyc07g056400.1.1	Tomato	nucleus	40.23	43.06
TraesCS5B01G377300.1	Wheat	plastid	35.59	42.89
CDY30659	Canola	nucleus	40.62	42.77
CDY67737	Canola	nucleus	40.43	42.48
Bra041025.1-P	Field mustard	nucleus	40.43	42.48
CDX98447	Canola	nucleus	38.68	42.19
AT3G14370.1	Thale cress	nucleus	39.07	42.08
CDX97569	Canola	nucleus	38.88	41.96
Bra027344.1-P	Field mustard	nucleus	38.88	41.96
TraesCS3B01G147300.1	Wheat	cytosol	36.94	39.38
TraesCS5B01G037900.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	35.98	38.91
TraesCS5B01G128400.1	Wheat	plastid	31.53	34.9
TraesCS6B01G281400.1	Wheat	cytosol	34.43	31.96
TraesCS5B01G459300.1	Wheat	cytosol	31.53	31.47
TraesCS1B01G152700.1	Wheat	cytosol	32.3	30.14
TraesCS5B01G252500.1	Wheat	cytosol	32.69	29.29
TraesCS5B01G166900.1	Wheat	cytosol	32.3	29.14
TraesCS1B01G232000.1	Wheat	plastid	35.78	28.77
TraesCS7B01G123400.1	Wheat	cytosol	31.53	28.2
TraesCS3B01G183500.2	Wheat	cytosol	31.91	27.41
TraesCS2B01G411000.1	Wheat	cytosol	34.04	25.43
TraesCS2B01G309900.1	Wheat	cytosol	33.85	22.38
TraesCS5B01G115200.1	Wheat	cytosol	33.46	22.04

Protein Annotations

MapMan:18.4.6.5	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF82	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS4B01G221800	EnsemblPlants:TraesCS4B01G221800.1	TIGR:cd05574	SEG:seg

Description

No Description!

Coordinates

chr4B:-:466058377..466059930

Molecular Weight (calculated)

56664.4 Da

IEP (calculated)

10.079

GRAVY (calculated)

-0.321

Length

517 amino acids

Sequence
(BLAST)

001: MEAPHPHPPM DVHEPAPPSP PFSDISPHFP LSIADAGAGA LDLSFTSTAS ASTSSFTTAT TFSARSSLSL PSFSSSTSLS PRPHSSSTSP HWTHLAAARA
101: ATPDGVLRLA HLHLVRELGH GHLARVFLCR LKSSPPASPL FALKVVDLRD DDPSRVCHVL AESRVLSSLD HPFVPTLYAR LDAGRYACFL MDYCSGGDLH
201: LVLRRRPGGR LPVAAARFYA AEVLLALEYL HVLGFVYRDL KPENVLLRGD GHVVLSDFDL AFPASVEPAV RRRQVRQQIR RRKRRLLPSC FSSNRGSDED
301: DVDAKERFEF VAEPTTANSK DCVGTHEYLA PELVSGNGHG NGVDWWAFGV FLYELVYGRT PFKGPAKDVT LKNILSKQVT YPKLDGEAEA AAQLKDLVGR
401: LLERDPRRRM GSARGAAEIK RHPFFAGVDW ALIRCVTPPV VPEADAAASP TSAARQAKLG SWNSLGGSSF KKSSSFKKSS SFGRRSSYEE RQGVFRKLMS
501: WSQEGRSKKT KTSRMKP

Best Arabidopsis Sequence Match ( AT1G53700.1 )
(BLAST)

001: MEDDGYYLDT DLDLSFTSTA TDRTFTSSSA RSSLARSSLT LSFNDRLSTA TTPSTTTSSA ATTLHHRRYD PHWTSIRAAT TLSSDGRLHL RHFKLVRHLG
101: TGNLGRVFLC HLRDCPNPTG FALKVIDRDV LTAKKISHVE TEAEILSLLD HPFLPTLYAR IDASHYTCLL IDYCPNGDLH SLLRKQPNNR LPISPVRFFA
201: AEVLVALEYL HALGIVYRDL KPENILIRED GHIMLSDFDL CFKADVVPTF RSRRFRRTSS SPRKTRRGGG CFSTEVEYER EEIVAEFAAE PVTAFSKSCV
301: GTHEYLAPEL VAGNGHGSGV DWWAFGIFLY EMLYGTTPFK GGTKEQTLRN IVSNDDVAFT LEEEGMVEAK DLIEKLLVKD PRKRLGCARG AQDIKRHEFF
401: EGIKWPLIRN YKPPEIRGLV KKTKAHAGHV TAAVTPRRNK WLWWALSHLL RSKSLSKSSS KIQSNNNYYH YVGKKL

Arabidopsis Description

WAG1Serine/threonine-protein kinase WAG1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8M5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.