Factsheet for TraesCS5B01G252500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G383400.1
TraesCS3B01G415800.1
TraesCS3D01G376500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47750.1	TraesCS3A01G383400.1	AT5G04510.1	16973627
AT5G47750.1	TraesCS3B01G415800.1	AT5G04510.1	16973627
AT5G47750.1	TraesCS3D01G376500.1	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G261300.1	Wheat	cytosol	99.48	99.48
TraesCS5A01G253500.1	Wheat	cytosol	98.96	98.96
HORVU5Hr1G071250.1	Barley	cytosol	97.92	97.92
Os09t0478500-01	Rice	cytosol	85.96	85.08
Zm00001d005976_P008	Maize	cytosol	83.02	83.02
KXG35854	Sorghum	cytosol	82.84	82.84
Zm00001d020858_P001	Maize	cytosol	82.67	82.67
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	41.77	76.51
Bra024918.1-P	Field mustard	cytosol	66.55	69.31
CDY17708	Canola	cytosol	66.55	69.31
CDX77795	Canola	cytosol	68.11	68.83
AT5G47750.1	Thale cress	cytosol, plastid	68.8	67.75
TraesCS5B01G166900.1	Wheat	cytosol	67.24	67.71
KRH36626	Soybean	cytosol	70.54	66.94
VIT_19s0015g00770.t01	Wine grape	extracellular	70.36	66.45
GSMUA_AchrUn_...	Banana	cytosol	55.98	65.25
VIT_10s0116g00440.t01	Wine grape	plastid	70.02	65.16
KRH11623	Soybean	cytosol	66.72	65.14
Solyc07g065710.2.1	Tomato	plastid	68.11	65.07
PGSC0003DMT400057021	Potato	plastid	67.94	64.9
PGSC0003DMT400022397	Potato	plastid	68.8	64.76
Solyc10g005770.2.1	Tomato	plastid	68.46	64.44
TraesCS7B01G123400.1	Wheat	cytosol	63.78	63.67
GSMUA_Achr5P04290_001	Banana	cytosol	53.38	61.85
TraesCS6B01G281400.1	Wheat	cytosol	52.34	54.22
TraesCS5B01G459300.1	Wheat	cytosol	46.62	51.93
TraesCS1B01G152700.1	Wheat	cytosol	47.83	49.82
TraesCS2B01G411000.1	Wheat	cytosol	57.37	47.83
TraesCS3B01G183500.2	Wheat	cytosol	49.05	47.01
TraesCS5B01G377300.1	Wheat	plastid	34.14	45.92
TraesCS5B01G128400.1	Wheat	plastid	36.92	45.61
TraesCS3B01G147300.1	Wheat	cytosol	38.13	45.36
TraesCS1B01G232000.1	Wheat	plastid	49.39	44.32
TraesCS5B01G037900.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	34.49	41.63
TraesCS2B01G309900.1	Wheat	cytosol	45.58	33.63
TraesCS5B01G115200.1	Wheat	cytosol	45.41	33.38
TraesCS4B01G221800.1	Wheat	nucleus	29.29	32.69

Protein Annotations

MapMan:18.4.6.5	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF174	InterPro:Prot_kinase_dom	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS5B01G252500	EnsemblPlants:TraesCS5B01G252500.1	TIGR:cd05574	SEG:seg

Description

No Description!

Coordinates

chr5B:+:435155269..435159005

Molecular Weight (calculated)

63350.0 Da

IEP (calculated)

7.127

GRAVY (calculated)

-0.517

Length

577 amino acids

Sequence
(BLAST)

001: MSSKPASQSM PEQAAKPKEM GEDDRQRSAA EEISGEPDQQ QESPAPVLDK DAPDLSPDSG VLDVPLAPEA ESDESKETKN SDSNENQEKK SSQKSSISDS
101: CISAKVSDGT NSLGKTSGSA KTSGRDFTES GKSSMCRVSA SSDLSDESSC SSMSSATTKP HKGNDLRWEA IQVVKSREGV LGLNQFRLLK KLGSGDIGSV
201: YLSELSGTKS HFAMKVMDKT SLASRKKLLR AQTEREILQS LDHPFLPTLY THFETDKFSC LVMEFCPGGD LHTLRQRQPG KHFSEQAAKF YVAEVLLALE
301: YLHMLGIIYR DLKPENVLVR EDGHIMLTDF DLSLRCSVSP TVIRGANPGL DALQRNNAAY CVQPACIQPS CVVPTTCFGP RFFSKSKSKS KSKKEKPKPD
401: IVNQVNLFPE MIAEPTDARS MSFVGTHEYL APEIVKGEGH GSAVDWWTFG IFLYELLFGK TPFKGSGNRA TLFNVVGQPL RFPESPLVSF SARDMIRGLL
501: VKDPQHRLGH KRGATEIKQH PFFEGVNWAL IRCASPPDIP KPVELDCRPK QAPAANGKVA PASNQKGSDN YLEFEFF

Best Arabidopsis Sequence Match ( AT2G44830.2 )
(BLAST)

001: MLEMERVAEL KRLPSKGPVS GHLSRRPYLD FETRDAPGMH LESLRERAAR YNTGRSVNPT TTLGRELSQV LNVHREDMMM TQFGGNMNDF QEFEPVVSSV
101: RTMKAKYPLL EIEEIGAADD DVTCKGSNDM SEEAGSSSFR GVSHPPEPDD MDLITTVYVP ISEKNKPDSV CLMKSMSTTK GPFIEDISLC VPPKKPSPRV
201: LSPAESIVEE PATSLSPFSV ARASQNTENS LLPPDSDKEC VWDASLPPST NVSPHSSSVE SMNLARAMSI ANSSSATSTT QRSDVVLSMD KNYFDRSISM
301: VLDSFESTKT SASRASDSSG LSEESSWSNF TGSLNKPHKG NDPWWNAILA IRTRDGILGM SHFKLLKRLG CGDIGSVYLA ELSGTRCHFA VKVMDKASLE
401: DRKKLNRAQT ERDILQLLDH PFLPTLYTHF ETDRFSCLVM EYCPGGDLHT LRQRQPGKHF SEYAARFYAA EVLLALEYLH MLGVVYRDLK PENVLVRDDG
501: HIMLSDFDLS LRCAVSPTLI KTFDSDPSRR GAFCVQPACM EPTSACIIQP SCFLPRSIFP NKNKKNKSRK TQADFFKSHS GSLPELVAEP NTRSMSFVGT
601: HEYLAPEIIK GEGHGSAVDW WTFGIFVHEL LYGKTPFKGS GNRATLFNVV GEQLKFPESP ATSYAGRDLI QALLVKDPKN RLGTKRGATE IKQHPFFEGV
701: NWALIRCSTP PEVPRQMETE PPPKYGPIDP VGFGSNSKRM MGPPAVSAAA ADTKSGGKFL DFEFF

Arabidopsis Description

Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IV25]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.