Factsheet for TraesCS2B01G309900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G383400.1
TraesCS3B01G415800.1
TraesCS3D01G376500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G36350.1	TraesCS3A01G383400.1	AT5G04510.1	16973627
AT2G36350.1	TraesCS3B01G415800.1	AT5G04510.1	16973627
AT2G36350.1	TraesCS3D01G376500.1	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G291200.1	Wheat	cytosol	97.83	97.83
TraesCS2A01G292800.1	Wheat	cytosol	97.06	96.93
HORVU2Hr1G072580.1	Barley	cytosol	96.55	96.42
Os04t0410200-00	Rice	cytosol	52.17	81.11
OQU81510	Sorghum	cytosol	83.12	80.35
Zm00001d003812_P002	Maize	cytosol	81.97	80.23
Zm00001d025342_P003	Maize	cytosol	80.18	78.08
Bra005275.1-P	Field mustard	cytosol	13.81	66.67
GSMUA_Achr10P...	Banana	cytosol	53.96	60.98
GSMUA_Achr11P...	Banana	cytosol	52.69	57.46
GSMUA_Achr8P16090_001	Banana	nucleus	55.24	57.22
Bra039602.1-P	Field mustard	cytosol	5.37	56.0
GSMUA_Achr6P13320_001	Banana	cytosol	51.79	55.79
TraesCS5B01G115200.1	Wheat	cytosol	55.5	55.29
Bra040842.1-P	Field mustard	cytosol	5.24	54.67
CDY13336	Canola	cytosol, plastid	44.63	50.14
KRH62499	Soybean	cytosol	50.9	48.13
TraesCS5B01G166900.1	Wheat	cytosol	35.17	47.99
VIT_06s0061g01540.t01	Wine grape	cytosol	53.84	47.9
KRH56412	Soybean	cytosol	51.02	47.78
CDX75049	Canola	cytosol	44.12	47.72
TraesCS7B01G123400.1	Wheat	cytosol	34.91	47.23
CDX67542	Canola	cytosol	48.34	47.07
VIT_08s0007g03600.t01	Wine grape	cytosol	51.79	46.88
TraesCS6B01G281400.1	Wheat	cytosol	33.12	46.5
TraesCS5B01G459300.1	Wheat	cytosol	30.69	46.33
CDX84133	Canola	cytosol	45.01	45.77
TraesCS5B01G128400.1	Wheat	plastid	27.24	45.61
TraesCS5B01G252500.1	Wheat	cytosol	33.63	45.58
TraesCS5B01G377300.1	Wheat	plastid	24.94	45.45
TraesCS1B01G152700.1	Wheat	cytosol	31.84	44.95
Solyc11g067070.1.1	Tomato	cytosol	47.95	44.86
PGSC0003DMT400018337	Potato	cytosol	48.72	44.67
PGSC0003DMT400068291	Potato	cytosol	47.83	44.63
Solyc06g074480.2.1	Tomato	cytosol	48.59	44.44
KRH32674	Soybean	cytosol	48.72	44.15
TraesCS3B01G147300.1	Wheat	cytosol	27.37	44.12
KRH30833	Soybean	cytosol	48.59	43.88
KRH67882	Soybean	cytosol	48.72	43.74
KRG96169	Soybean	cytosol	48.08	43.32
Bra019641.1-P	Field mustard	cytosol	43.35	43.02
Bra028538.1-P	Field mustard	cytosol	48.98	42.79
TraesCS3B01G183500.2	Wheat	cytosol	32.86	42.69
Bra005280.1-P	Field mustard	cytosol	48.47	42.68
TraesCS5B01G037900.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	25.7	42.05
CDX76251	Canola	cytosol	44.12	41.92
KRH23770	Soybean	cytosol	43.48	41.82
AT3G52890.4	Thale cress	cytosol	49.62	41.54
TraesCS2B01G411000.1	Wheat	cytosol	36.19	40.9
AT2G36350.1	Thale cress	cytosol	48.34	39.83
TraesCS1B01G232000.1	Wheat	plastid	32.23	39.19
Solyc10g083500.1.1	Tomato	nucleus	49.74	38.71
PGSC0003DMT400072395	Potato	nucleus	49.74	38.71
CDX70297	Canola	cytosol	43.35	38.65
Bra009522.1-P	Field mustard	cytosol	44.12	38.5
CDY10368	Canola	cytosol	44.12	38.16
AT5G03640.1	Thale cress	nucleus	44.88	37.91
PGSC0003DMT400006862	Potato	cytosol	49.23	37.75
Solyc09g009380.2.1	Tomato	cytosol	49.1	37.65
CDX78131	Canola	cytosol	47.19	36.53
CDX73596	Canola	cytosol	46.8	36.42
Bra006955.1-P	Field mustard	cytosol	47.19	35.34
TraesCS4B01G221800.1	Wheat	nucleus	22.38	33.85

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF92
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS2B01G309900	EnsemblPlants:TraesCS2B01G309900.1
TIGR:cd05574	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:442795590..442798055

Molecular Weight (calculated)

85161.9 Da

IEP (calculated)

9.583

GRAVY (calculated)

-0.441

Length

782 amino acids

Sequence
(BLAST)

001: MGSSGCPEIV ELVDETKDAR PGGVTHLRVR VKPVGQEHGG RSCSVEDDLD RLLRSFNVRT SARASGQTST DKRLIALGKA PMSSSEIVES VSLKQALRKM
101: CISQASEMAA MKRTSKPAAV SNTPESGAIK KLYASVVVPT DEDQDGKSKV EKAVALPDKV VVSSPVKLVE ASKKVHSKGS ANKHVRSASP TKAKVQKTSI
201: QDVISNKSLE ASEDPSAGRA VAKQRKGKSP KASSPRAVPV GGSRLVFRSK SSTKKKVKPE PAAAVASQKH CEAKGSGSHS KKQQEALQDE PKTPAPNNKK
301: GADGSLGPEG VDFGKGCYVS GIPSSQPGEL SRSKEKGESS QSSKSSIGDY STSTSISEDS YGSFSANGSR PHMSKDVRWE AMRRIAIQQG TLGLRNFKLL
401: KQLGCGDIGT VYLAELVGSD CMFALKVMDI EYLISRKKML RAQTEREILQ MLDHPFLPTL YSYFTTDNLS CLVMEYCPGG DLHVLRQKQP TRCFSEAAAR
501: FYVAEVLLAL EYLHMLGVIY RDLKPENILV REDGHIMLSD FDLSLRCSVN PMLVRCSSVG RDEPPRPSGP CAESCIDPLC IQPSWANSSC FTPRLVSSTP
601: SRTRRAEPLK KPSLPQLVVE PTDARSNSFV GTHEYLAPEI IRGDGHGSSV DWWTLGIFLY ELLYGKTPFR GPGNDETLTN VVSQGLKFPD SPAVSYQARD
701: LIRGLLVKEP ELRLGSRKGA AEIKRHPFFQ GLNWALIRWT APPETPKSVD ASTLTAAVAR KKKEGKCLEF RMNGDDIEFE LF

Best Arabidopsis Sequence Match ( AT3G52890.2 )
(BLAST)

001: MGSFAGACEI VEEKDDEVRL PKHSGRYGKS VMGSSSKDLV ERKQREYHGS LEYDIDMLFQ SISVKPSTTR LMSSSFHHHE TSASAGPSRT TSPSKRIASM
101: KKPGTPQSPR FVGLSDSVSL KQALRDRCIS KASEMAAQKR LSKSAAASPR VSEADRIKSL YNQVSNESTS SRSGLVPVDK GKGSLVEIPL MPVNDKPSSS
201: KSVPQRFEDP SNPISEPSQA GTSFGLQGVG NQTREIKLLH RSNKPGSCLS SGSGDYEIEL DENVASPSTH AFVEDDVIEI DKHVTSLPSH SSKKVNATEL
301: DKNISSSAVD SEQKGKLDDA PNSGTENGKT VRKVTRMIPR PKQPKKKILL KKKLKIGVVS ATYPTKDDEE IVPSLDSSAN QLLCQRCHCS LKSTSIDDNP
401: PSYTSSHNPK ICTDSLSSVS NKEAHQGSDE NSSGSCNVSQ SSEADIVIMK QDVSSSNNSG IGAMVEKETE NPTSSEKFEF SLSSKDSLGD YSRSTSISEE
501: SNLSRFSCGN KPHMSMDVRW EAIKHIKVQY GSLGLRHFNL LKKLGCGDIG TVYLAELIGT NCLFAIKVMD NEFLARRKKS PRAQAEREIL KMLDHPFLPT
601: LYAQFTSDNL SCLVMEYCPG GDLHVLRQKQ LGRCFPEPAA RFYVAEILLA LEYLHMLGII YRDLKPENIL VREDGHIMLT DFDLSLRCAV NPTLVRSNSP
701: PGKDPARISG PYNTSNCIQP FCITEPSCQV SCFSPRLSSN QQQGRKPKRG DHLSKTQQHL SRSLPQLVAE PTEARSNSFV GTHEYLAPEI IKGEGHGAAV
801: DWWTFGVLLY ELLYGKTPFK GYNNDETLAN VVLQNLKFPD SPLVSFQAKD LIRGLLVKEP ENRLGSEKGS VEIKRHPFFE GLNWALIRCA IPPELPDFYE
901: YGGGPEAAAD SPGGSNNRYL ECKAIGDHLE FELF

Arabidopsis Description

KIPK1Serine/threonine-protein kinase KIPK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.