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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • vacuole 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, vacuole
BaCelLo:nucleus
EpiLoc:vacuole
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400043552
PGSC0003DMT400070360

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G36350.1 PGSC0003DMT400043552 AT5G04510.1 16973627
AT2G36350.1 PGSC0003DMT400070360 AT5G04510.1 16973627
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc10g083500.1.1 Tomato nucleus 97.21 97.21
Bra005275.1-P Field mustard cytosol 11.64 72.22
PGSC0003DMT400006862 Potato cytosol 72.24 71.18
Os12t0480200-01 Rice cytosol 28.56 66.74
Bra039602.1-P Field mustard cytosol 4.38 58.67
Bra040842.1-P Field mustard cytosol 4.28 57.33
VIT_08s0007g03600.t01 Wine grape cytosol 49.15 57.18
CDY13336 Canola cytosol, plastid 39.4 56.9
PGSC0003DMT400025008 Potato cytosol 25.07 56.0
KRH30833 Soybean cytosol 47.76 55.43
KRH32674 Soybean cytosol 47.56 55.39
KRH67882 Soybean cytosol 46.37 53.5
CDX75049 Canola cytosol 38.41 53.39
KRG96169 Soybean cytosol 45.97 53.23
CDX67542 Canola cytosol 41.99 52.55
CDX84133 Canola cytosol 40.0 52.28
GSMUA_Achr10P... Banana cytosol 35.12 51.01
PGSC0003DMT400003557 Potato cytosol, plastid 26.27 50.77
HORVU2Hr1G072580.1 Barley cytosol 39.2 50.32
TraesCS2D01G291200.1 Wheat cytosol 38.91 50.0
TraesCS2A01G292800.1 Wheat cytosol 38.91 49.94
TraesCS2B01G309900.1 Wheat cytosol 38.71 49.74
Bra019641.1-P Field mustard cytosol 38.91 49.62
Bra005280.1-P Field mustard cytosol 43.78 49.55
AT3G52890.4 Thale cress cytosol 45.97 49.46
Bra028538.1-P Field mustard cytosol 43.88 49.27
EES17014 Sorghum cytosol 38.41 48.86
CDX76251 Canola cytosol 39.6 48.36
OQU81510 Sorghum cytosol 38.81 48.21
Zm00001d003812_P002 Maize cytosol 38.31 48.19
GSMUA_Achr11P... Banana cytosol 34.33 48.12
PGSC0003DMT400050818 Potato cytosol 29.05 48.11
Zm00001d025342_P003 Maize cytosol 38.41 48.07
Zm00001d041063_P001 Maize cytosol 37.71 47.97
GSMUA_Achr8P16090_001 Banana nucleus 35.92 47.81
TraesCS5A01G107300.1 Wheat cytosol 37.31 47.77
AT2G36350.1 Thale cress cytosol 45.07 47.73
PGSC0003DMT400057021 Potato plastid 28.66 47.68
TraesCS5B01G115200.1 Wheat cytosol 37.11 47.52
HORVU5Hr1G035610.2 Barley cytosol 37.11 47.46
TraesCS5D01G122400.1 Wheat cytosol 37.01 47.39
PGSC0003DMT400022397 Potato plastid 28.76 47.15
PGSC0003DMT400068291 Potato cytosol 39.3 47.14
PGSC0003DMT400018337 Potato cytosol 40.0 47.13
GSMUA_Achr6P13320_001 Banana cytosol 33.73 46.69
PGSC0003DMT400053292 Potato cytosol, plastid 21.49 46.55
PGSC0003DMT400068252 Potato nucleus 21.29 45.24
AT5G03640.1 Thale cress nucleus 41.59 45.14
PGSC0003DMT400050201 Potato cytosol 20.7 45.12
CDX70297 Canola cytosol 39.1 44.81
Bra009522.1-P Field mustard cytosol 39.9 44.75
CDY10368 Canola cytosol 39.8 44.25
PGSC0003DMT400032816 Potato cytosol 27.66 44.06
CDX73596 Canola cytosol 42.39 42.39
PGSC0003DMT400067034 Potato cytosol 29.35 42.14
CDX78131 Canola cytosol 42.29 42.08
PGSC0003DMT400017808 Potato cytosol, plastid 27.86 42.04
Bra006955.1-P Field mustard cytosol 42.89 41.28
PGSC0003DMT400079838 Potato nucleus 18.81 39.29
PGSC0003DMT400068494 Potato cytosol 26.97 38.55
Os04t0410200-00 Rice cytosol 18.91 37.77
Protein Annotations
Gene3D:1.10.510.10EntrezGene:102599640MapMan:18.4.6.5Gene3D:3.30.200.20GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:Kinase-like_dom_sfUniProt:M1CQ81PFAM:PF00069EnsemblPlantsGene:PGSC0003DMG400028169PGSC:PGSC0003DMG400028169
EnsemblPlants:PGSC0003DMT400072395ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24351PANTHER:PTHR24351:SF92InterPro:Prot_kinase_dom
SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI000295115FRefSeq:XP_006339122.1SEG:seg
Description
Serine/threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400028169]
Coordinates
chr10:-:55694358..55699103
Molecular Weight (calculated)
110121.0 Da
IEP (calculated)
9.741
GRAVY (calculated)
-0.527
Length
1005 amino acids
Sequence
(BLAST)
0001: MGSFRGNCEI VESKDEAELF QHSRRFNQVL EPDRKQQKPP LARKGAGKYL GDDINQLFES INVRTSKSLD LTDHVRRDAS KRPMRGGGSN SPVTGFSDPV
0101: SLKQAFRGLC ISQAAEMAAM RRLSKPPGSP SGSEPGRITC SSRFAGPSES GFLRSERLLQ DESISGGLHK LSHNPHERYV KSANHSPRSS PRFSIKPFNM
0201: SQNGRVAPSE SMSSSAPQHI QESRLKSPGQ SALSSPRYAS KPSIKSTESI SRQSERILSA ENVPGNRKKD FLQPPEANMR STSQSALSSP RIGDKPVTKQ
0301: AESVVAQNER TGGAESISGF FNMIPDYQEH MKSPHKGAIS SPRLVAAQAL QFTTSSLQET KNAQASNHHG IKPLGTASTK EKTQTAVPSS SSCESSNVVL
0401: VFGPKRSPDN QKRNVVTSFR VANKAALKLR RKGRSQTVPS SNVVKGNKES KSRKSTSRSI KPPVKNKYLL KKKLKEEVAL AAGTFNLCYE INGPTESPSQ
0501: LICQRCQCTL EGTGKESSEE PAKQTSGCMT IGASENSTSC AANGYNNSGP PVLKFNKTSK SREQGEFSQS SKSSIGDYST STTISEESNL SGSFSGNRPH
0601: MSKDGRWEAI NQVRKHYGFL GLSHFNLLKK LGCGDIGTVY LAELLETNCL FAIKVMDNEY LARRKKLPRA QTEREILRIL DHPFLPTLYA QFTSDNLSCL
0701: VMEFCSGGDL HVLRQKQPGR YFSEPAARFY VAEVLLALEY LHMLGVVYRD LKPENILVRE DGHIMLTDFD LSLRCSVNPT LLQSSSLGVE APRISGPCAG
0801: SNCIDPFCAG PSCQVSCFSP RVLPGTARAR KLKAEAAASL NRSLPQLVVE PTEARSNSFV GTHEYLAPEI IKGEGHGSAV DWWTLGVFLY ELLYGKTPFK
0901: GAGNEETLAN VVLQNLRFPD SQIVSFQARD LIRTLLVKEP ENRLGTETGA AEIKRHPFFD GLNWALIRCA VPPQVPGVTK VALEEKSKKF LECGSTGEHL
1001: EFELF
Best Arabidopsis Sequence Match ( AT3G52890.2 )
(BLAST)
001: MGSFAGACEI VEEKDDEVRL PKHSGRYGKS VMGSSSKDLV ERKQREYHGS LEYDIDMLFQ SISVKPSTTR LMSSSFHHHE TSASAGPSRT TSPSKRIASM
101: KKPGTPQSPR FVGLSDSVSL KQALRDRCIS KASEMAAQKR LSKSAAASPR VSEADRIKSL YNQVSNESTS SRSGLVPVDK GKGSLVEIPL MPVNDKPSSS
201: KSVPQRFEDP SNPISEPSQA GTSFGLQGVG NQTREIKLLH RSNKPGSCLS SGSGDYEIEL DENVASPSTH AFVEDDVIEI DKHVTSLPSH SSKKVNATEL
301: DKNISSSAVD SEQKGKLDDA PNSGTENGKT VRKVTRMIPR PKQPKKKILL KKKLKIGVVS ATYPTKDDEE IVPSLDSSAN QLLCQRCHCS LKSTSIDDNP
401: PSYTSSHNPK ICTDSLSSVS NKEAHQGSDE NSSGSCNVSQ SSEADIVIMK QDVSSSNNSG IGAMVEKETE NPTSSEKFEF SLSSKDSLGD YSRSTSISEE
501: SNLSRFSCGN KPHMSMDVRW EAIKHIKVQY GSLGLRHFNL LKKLGCGDIG TVYLAELIGT NCLFAIKVMD NEFLARRKKS PRAQAEREIL KMLDHPFLPT
601: LYAQFTSDNL SCLVMEYCPG GDLHVLRQKQ LGRCFPEPAA RFYVAEILLA LEYLHMLGII YRDLKPENIL VREDGHIMLT DFDLSLRCAV NPTLVRSNSP
701: PGKDPARISG PYNTSNCIQP FCITEPSCQV SCFSPRLSSN QQQGRKPKRG DHLSKTQQHL SRSLPQLVAE PTEARSNSFV GTHEYLAPEI IKGEGHGAAV
801: DWWTFGVLLY ELLYGKTPFK GYNNDETLAN VVLQNLKFPD SPLVSFQAKD LIRGLLVKEP ENRLGSEKGS VEIKRHPFFE GLNWALIRCA IPPELPDFYE
901: YGGGPEAAAD SPGGSNNRYL ECKAIGDHLE FELF
Arabidopsis Description
KIPK1Serine/threonine-protein kinase KIPK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.