Factsheet for TraesCS5A01G107300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G383400.1
TraesCS3B01G415800.1
TraesCS3D01G376500.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G36350.1	TraesCS3A01G383400.1	AT5G04510.1	16973627
AT2G36350.1	TraesCS3B01G415800.1	AT5G04510.1	16973627
AT2G36350.1	TraesCS3D01G376500.1	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G122400.1	Wheat	cytosol	98.73	98.73
TraesCS5B01G115200.1	Wheat	cytosol	98.34	98.34
HORVU5Hr1G035610.2	Barley	cytosol	97.07	96.95
Os12t0480200-01	Rice	cytosol	49.04	89.53
EES17014	Sorghum	cytosol	83.69	83.16
Zm00001d041063_P001	Maize	cytosol	82.17	81.65
Bra005275.1-P	Field mustard	cytosol	13.25	64.2
GSMUA_Achr10P...	Banana	cytosol	54.01	61.27
GSMUA_Achr11P...	Banana	cytosol	54.01	59.14
GSMUA_Achr8P16090_001	Banana	nucleus	54.9	57.09
TraesCS2A01G292800.1	Wheat	cytosol	55.54	55.68
GSMUA_Achr6P13320_001	Banana	cytosol	50.57	54.68
CDY13336	Canola	cytosol, plastid	43.18	48.71
Bra039602.1-P	Field mustard	cytosol	4.59	48.0
Bra040842.1-P	Field mustard	cytosol	4.59	48.0
KRH62499	Soybean	cytosol	50.06	47.52
TraesCS5A01G170100.1	Wheat	cytosol	34.27	46.95
KRH56412	Soybean	cytosol	49.68	46.71
VIT_06s0061g01540.t01	Wine grape	cytosol	51.85	46.3
VIT_08s0007g03600.t01	Wine grape	cytosol	50.45	45.83
CDX67542	Canola	cytosol	46.11	45.08
TraesCS5A01G253500.1	Wheat	cytosol	33.12	45.06
TraesCS7A01G216200.1	Wheat	cytosol, plastid	32.99	44.81
TraesCS1A01G133200.1	Wheat	cytosol	31.46	44.58
CDX75049	Canola	cytosol	40.89	44.4
TraesCS3A01G128200.1	Wheat	cytosol	27.13	43.92
KRH32674	Soybean	cytosol	48.15	43.8
KRH30833	Soybean	cytosol	48.03	43.53
Solyc11g067070.1.1	Tomato	cytosol	46.24	43.42
KRG96169	Soybean	cytosol	47.9	43.32
PGSC0003DMT400068291	Potato	cytosol	46.24	43.32
KRH67882	Soybean	cytosol	48.03	43.28
PGSC0003DMT400018337	Potato	cytosol	47.01	43.26
Solyc06g074480.2.1	Tomato	cytosol	46.88	43.04
TraesCS5A01G375200.1	Wheat	plastid	25.1	43.01
TraesCS5A01G129700.1	Wheat	plastid	25.86	42.65
TraesCS3A01G157100.1	Wheat	cytosol	32.1	42.35
CDX84133	Canola	cytosol	41.4	42.26
TraesCS5A01G037100.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	25.35	41.72
TraesCS5A01G450900.1	Wheat	plastid	30.06	41.48
Bra028538.1-P	Field mustard	cytosol	46.62	40.89
Bra019641.1-P	Field mustard	cytosol	40.89	40.74
KRH23770	Soybean	cytosol	42.04	40.59
TraesCS1A01G218500.1	Wheat	cytosol, plastid	32.74	40.28
Bra005280.1-P	Field mustard	cytosol	45.35	40.09
CDX76251	Canola	cytosol	41.78	39.85
TraesCS6A01G242800.1	Wheat	cytosol	32.87	39.57
AT3G52890.4	Thale cress	cytosol	46.62	39.19
TraesCS2A01G392900.1	Wheat	cytosol	34.14	38.67
CDX70297	Canola	cytosol	42.17	37.74
AT5G03640.1	Thale cress	nucleus	44.46	37.69
AT2G36350.1	Thale cress	cytosol	45.22	37.41
Bra009522.1-P	Field mustard	cytosol	42.68	37.39
Solyc10g083500.1.1	Tomato	nucleus	47.77	37.31
PGSC0003DMT400072395	Potato	nucleus	47.77	37.31
CDY10368	Canola	cytosol	42.93	37.28
Solyc09g009380.2.1	Tomato	cytosol	47.77	36.76
PGSC0003DMT400006862	Potato	cytosol	47.52	36.57
CDX73596	Canola	cytosol	45.48	35.52
CDX78131	Canola	cytosol	45.61	35.45
Bra006955.1-P	Field mustard	cytosol	45.61	34.29
TraesCS4A01G082200.1	Wheat	nucleus	22.29	33.72

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF176
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS5A01G107300	EnsemblPlants:TraesCS5A01G107300.1
TIGR:cd05574	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr5A:+:180992606..180995656

Molecular Weight (calculated)

86183.2 Da

IEP (calculated)

7.207

GRAVY (calculated)

-0.395

Length

785 amino acids

Sequence
(BLAST)

001: MGSSGCSSEI VESNEDLDNA PVSGSSVLHI NVKTEEKDGR RRGHPVEDEL DQLLKAIDSR TYRRALSPGQ AGADSLSKHA QKTPRSGSSQ IAVTGICSKP
101: VNMKQALRRH CISQASEMAA MKRLSMSPGS SSSSEAGTIH RLYASLMVQS SDGSVVHDDK KNLIEISITP EKISKNLSRG TSGFSEDCDF ETADGSAVTS
201: IHSASSTSTD IQKVRIQDVI SGDPVESESS IVQNGKTHKQ VSATTDDSPS RIPILIKPIT TSRLVKPVFR CKTSSKSKMK EEQPSLGNSS NSTKFCSSKE
301: SISHVSTSSS SASSISNPTS CAEGEINPGP EKSDERSSEW LTLEKGECSQ NSKSSISEYG CSTSISDESQ FGLCGYNNRP HMVKDLCWIT IRQLALQQGP
401: LGLDNFRLLK RLGCGDIGTV YLAELVDSDC LFALKVMDIE YLISRKKMLR AQAEREILEM LDHPFLPTLY AHFTTDNLSC LVMEYCPGGD LHVLRQRQPG
501: RSFPEPSARF YVAEVLLALE YLHMLGVIYR DLKPENILVR DDGHIMLSDF DLSLRCSVSA VLLRSSSVAA NHQPKKLTSP CAESYCINSS CLQPSCAQTS
601: CFRPRPWVPK PRKPKSSLKR LPQLVVEPTE ARSNSFVGTH EYLAPEIIKG DGHGSAVDWW TFGVFLYELL YGRTPFRGPG NDETLANVVS QNLRFPDNPV
701: VSSNAKDLIR GLLVKEPENR LGTLRGAAEI KQHPFFEGLN WALIRSAAPP ETRPCDVVTL ATVRKKKEGK CLDFRSAEEL EFEVF

Best Arabidopsis Sequence Match ( AT3G52890.2 )
(BLAST)

001: MGSFAGACEI VEEKDDEVRL PKHSGRYGKS VMGSSSKDLV ERKQREYHGS LEYDIDMLFQ SISVKPSTTR LMSSSFHHHE TSASAGPSRT TSPSKRIASM
101: KKPGTPQSPR FVGLSDSVSL KQALRDRCIS KASEMAAQKR LSKSAAASPR VSEADRIKSL YNQVSNESTS SRSGLVPVDK GKGSLVEIPL MPVNDKPSSS
201: KSVPQRFEDP SNPISEPSQA GTSFGLQGVG NQTREIKLLH RSNKPGSCLS SGSGDYEIEL DENVASPSTH AFVEDDVIEI DKHVTSLPSH SSKKVNATEL
301: DKNISSSAVD SEQKGKLDDA PNSGTENGKT VRKVTRMIPR PKQPKKKILL KKKLKIGVVS ATYPTKDDEE IVPSLDSSAN QLLCQRCHCS LKSTSIDDNP
401: PSYTSSHNPK ICTDSLSSVS NKEAHQGSDE NSSGSCNVSQ SSEADIVIMK QDVSSSNNSG IGAMVEKETE NPTSSEKFEF SLSSKDSLGD YSRSTSISEE
501: SNLSRFSCGN KPHMSMDVRW EAIKHIKVQY GSLGLRHFNL LKKLGCGDIG TVYLAELIGT NCLFAIKVMD NEFLARRKKS PRAQAEREIL KMLDHPFLPT
601: LYAQFTSDNL SCLVMEYCPG GDLHVLRQKQ LGRCFPEPAA RFYVAEILLA LEYLHMLGII YRDLKPENIL VREDGHIMLT DFDLSLRCAV NPTLVRSNSP
701: PGKDPARISG PYNTSNCIQP FCITEPSCQV SCFSPRLSSN QQQGRKPKRG DHLSKTQQHL SRSLPQLVAE PTEARSNSFV GTHEYLAPEI IKGEGHGAAV
801: DWWTFGVLLY ELLYGKTPFK GYNNDETLAN VVLQNLKFPD SPLVSFQAKD LIRGLLVKEP ENRLGSEKGS VEIKRHPFFE GLNWALIRCA IPPELPDFYE
901: YGGGPEAAAD SPGGSNNRYL ECKAIGDHLE FELF

Arabidopsis Description

KIPK1Serine/threonine-protein kinase KIPK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.