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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78131 Canola cytosol 95.92 95.45
CDX67542 Canola cytosol 62.99 78.83
CDY13336 Canola cytosol, plastid 54.43 78.59
AT3G52890.4 Thale cress cytosol 71.24 76.66
CDX76251 Canola cytosol 61.89 75.58
CDX75049 Canola cytosol 50.95 70.82
CDX84133 Canola cytosol 53.43 69.83
Os12t0480200-01 Rice cytosol 27.86 65.12
CDY20744 Canola cytosol, plastid 25.77 53.73
CDY06552 Canola cytosol, plastid 25.87 53.72
KRH32674 Soybean cytosol 45.47 52.95
KRG96169 Soybean cytosol 45.67 52.88
CDY36769 Canola cytosol, plastid 25.87 52.85
CDY11972 Canola cytosol, plastid 25.87 52.85
KRH67882 Soybean cytosol 45.77 52.81
CDY17366 Canola cytosol, plastid 26.27 52.8
CDY28629 Canola cytosol, plastid 26.27 52.8
KRH30833 Soybean cytosol 45.47 52.77
CDX74407 Canola cytosol, plastid 24.48 51.46
VIT_08s0007g03600.t01 Wine grape cytosol 43.78 50.93
CDX94306 Canola cytosol 25.77 50.49
CDX89320 Canola cytosol 25.77 50.49
CDY17708 Canola cytosol 27.26 49.46
CDY30287 Canola cytosol, plastid 24.48 49.0
GSMUA_Achr10P... Banana cytosol 33.63 48.84
CDX77795 Canola cytosol 27.66 48.69
CDY33329 Canola cytosol 23.58 48.67
EES17014 Sorghum cytosol 36.92 46.96
TraesCS2D01G291200.1 Wheat cytosol 36.52 46.93
CDX70297 Canola cytosol 40.9 46.86
CDX74691 Canola cytosol 25.97 46.86
TraesCS2B01G309900.1 Wheat cytosol 36.42 46.8
HORVU2Hr1G072580.1 Barley cytosol 36.42 46.74
TraesCS2A01G292800.1 Wheat cytosol 36.42 46.74
CDY35093 Canola cytosol 23.68 46.67
Zm00001d041063_P001 Maize cytosol 36.52 46.46
CDY10368 Canola cytosol 41.49 46.13
GSMUA_Achr11P... Banana cytosol 32.84 46.03
CDX83710 Canola cytosol, plastid 25.07 45.9
CDY56474 Canola cytosol 26.07 45.8
TraesCS5B01G115200.1 Wheat cytosol 35.52 45.48
TraesCS5A01G107300.1 Wheat cytosol 35.52 45.48
TraesCS5D01G122400.1 Wheat cytosol 35.32 45.22
GSMUA_Achr8P16090_001 Banana nucleus 33.93 45.17
HORVU5Hr1G035610.2 Barley cytosol 35.32 45.17
GSMUA_Achr6P13320_001 Banana cytosol 32.44 44.9
Zm00001d003812_P002 Maize cytosol 35.42 44.56
CDY08710 Canola cytosol, plastid 19.5 44.44
CDY43662 Canola cytosol 19.4 44.42
CDX84294 Canola cytosol, plastid 19.4 44.42
OQU81510 Sorghum cytosol 35.72 44.38
Zm00001d025342_P003 Maize cytosol 35.32 44.21
CDY17273 Canola cytosol 19.3 44.19
CDY13725 Canola plastid 24.58 42.88
CDY08414 Canola cytosol, plastid 24.28 42.73
CDY30488 Canola cytosol 26.27 42.72
CDY42166 Canola cytosol, plastid 24.18 42.71
CDY50542 Canola cytosol 24.28 42.66
PGSC0003DMT400072395 Potato nucleus 42.39 42.39
Solyc10g083500.1.1 Tomato nucleus 42.29 42.29
Solyc09g009380.2.1 Tomato cytosol 42.59 41.96
PGSC0003DMT400006862 Potato cytosol 42.49 41.86
CDY48186 Canola cytosol 20.1 41.39
CDY23458 Canola cytosol 26.07 40.56
CDX97569 Canola nucleus 18.01 37.79
Os04t0410200-00 Rice cytosol 18.91 37.77
CDX98447 Canola nucleus 17.81 37.76
CDY30659 Canola nucleus 18.01 36.86
CDY67737 Canola nucleus 18.01 36.79
CDX77055 Canola cytosol 20.1 23.52
CDY33330 Canola cytosol, mitochondrion, nucleus 3.38 20.86
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.6.5Gene3D:3.30.200.20GO:A0A078C964EnsemblPlants:CDX73596ProteinID:CDX73596
ProteinID:CDX73596.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:GORABEnsemblPlantsGene:GSBRNA2T00109152001
InterPro:IPR000719InterPro:Kinase-like_dom_sfPFAM:PF00069PFAM:PF04949ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR24351PANTHER:PTHR24351:SF92InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI0004EF45C9SEG:seg::::
Description
BnaC08g24070D
Coordinates
chrLK031799:-:1502440..1507561
Molecular Weight (calculated)
112190.0 Da
IEP (calculated)
7.946
GRAVY (calculated)
-0.631
Length
1005 amino acids
Sequence
(BLAST)
0001: MGSFAGSCEI VEEKDEELRM AKVHSGRYGK PSLGGSSNKD SERKQREYHG SLEYDIDKLF QSIPVKPPTR RLLSSSFHNN FETSASAGPS RTTSPSKRSA
0101: MKKPMTPQSP RVADSLSLKQ ALRDRCISKA SEMAAQKRLS KSAAASPRVS EADRIKSLYN QSTRLVPVDK GKGTLVDETS LMPVNKDIPS TSRSVSQRSE
0201: EPPNPVSEPS QGGTNRSGSW LSSGSGDCEV ELDENVASTS AQDDVQEVDK HVTSLLPSDS SNKDNAEELE KKILSTTLDL EQTVKLDDSP PEKSKTVRKV
0301: TRMIPRPKKK ILVKKKLKIG IVSTKKDEET NKLLCQRCHC SLKSTSIINN QPPSYTTSHE VADENSSGSC NVSQSSEAEI IVMKQNVSSS NNDSGNKFEF
0401: SLSSKDSLGD YSRSTSMSEE SNLSSRFSCG NKPHMSMDVR WEAIKHVKLQ CGGSLGLRHF NLLKKLGCGD IGTVYLAELI GTNCLFAIKV MDNEFLARRK
0501: KSPRAQAERE ILKMLDHPFL PTLYAQFTSD NLSCLVMEYC PGGDVHVLRQ KQLGRCFPEP AARFYVAEIL LALEYLHMLG IIYRDLKPEN ILVREDGHIM
0601: LTDFDLSLRC AVNPTLLTST SPPDPARMSD PYNTSNCIQP FCVNEQSCQV SCFSPRLSSN QQQQGRKPKR PDQHLNRSSL PQLVAEPTEA RSNSFVGTHE
0701: YLAPEIIKGE GHGAAVDWWT FGVLLYELLY GKTPFKGYNN DQTLANVVLE NLKFPDSPLV SFQAKDLIRG LLVKEPENRF GTEKGSAEIK RHPFFEGLNW
0801: ALIRCATPPE LPDCYDFGGG PGSPGGNDDR CWERHVVINK KEMSIKNSGA APASAVNTNG KLPMEENEEE EIWKVAVSRF QAREEEIERK KMTVKEKVQQ
0901: RLGFAEEATR CLTQTLEELE IMGDPMRKEV GMVRKKIDMA NRDIKSLAQI CQKKEKEYKE TLEAFNEKNK EKTHLVSMLM ELLAESERVR MKKLEEINKT
1001: VGALQ
Best Arabidopsis Sequence Match ( AT3G52890.2 )
(BLAST)
001: MGSFAGACEI VEEKDDEVRL PKHSGRYGKS VMGSSSKDLV ERKQREYHGS LEYDIDMLFQ SISVKPSTTR LMSSSFHHHE TSASAGPSRT TSPSKRIASM
101: KKPGTPQSPR FVGLSDSVSL KQALRDRCIS KASEMAAQKR LSKSAAASPR VSEADRIKSL YNQVSNESTS SRSGLVPVDK GKGSLVEIPL MPVNDKPSSS
201: KSVPQRFEDP SNPISEPSQA GTSFGLQGVG NQTREIKLLH RSNKPGSCLS SGSGDYEIEL DENVASPSTH AFVEDDVIEI DKHVTSLPSH SSKKVNATEL
301: DKNISSSAVD SEQKGKLDDA PNSGTENGKT VRKVTRMIPR PKQPKKKILL KKKLKIGVVS ATYPTKDDEE IVPSLDSSAN QLLCQRCHCS LKSTSIDDNP
401: PSYTSSHNPK ICTDSLSSVS NKEAHQGSDE NSSGSCNVSQ SSEADIVIMK QDVSSSNNSG IGAMVEKETE NPTSSEKFEF SLSSKDSLGD YSRSTSISEE
501: SNLSRFSCGN KPHMSMDVRW EAIKHIKVQY GSLGLRHFNL LKKLGCGDIG TVYLAELIGT NCLFAIKVMD NEFLARRKKS PRAQAEREIL KMLDHPFLPT
601: LYAQFTSDNL SCLVMEYCPG GDLHVLRQKQ LGRCFPEPAA RFYVAEILLA LEYLHMLGII YRDLKPENIL VREDGHIMLT DFDLSLRCAV NPTLVRSNSP
701: PGKDPARISG PYNTSNCIQP FCITEPSCQV SCFSPRLSSN QQQGRKPKRG DHLSKTQQHL SRSLPQLVAE PTEARSNSFV GTHEYLAPEI IKGEGHGAAV
801: DWWTFGVLLY ELLYGKTPFK GYNNDETLAN VVLQNLKFPD SPLVSFQAKD LIRGLLVKEP ENRLGSEKGS VEIKRHPFFE GLNWALIRCA IPPELPDFYE
901: YGGGPEAAAD SPGGSNNRYL ECKAIGDHLE FELF
Arabidopsis Description
KIPK1Serine/threonine-protein kinase KIPK1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFA2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.