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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70218
CDY44862

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G26700.1 CDX70218 AT5G04510.1 16973627
AT2G26700.1 CDY44862 AT5G04510.1 16973627
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra034312.1-P Field mustard cytosol 99.59 91.87
AT2G26700.1 Thale cress cytosol, plastid 88.52 82.29
VIT_11s0016g04910.t01 Wine grape nucleus, plastid 61.07 63.4
Solyc12g006690.1.1 Tomato nucleus, plastid 58.61 61.9
PGSC0003DMT400053292 Potato cytosol, plastid 58.81 61.85
GSMUA_Achr10P... Banana nucleus 51.02 60.58
KRH03726 Soybean plastid 59.02 58.78
KRH56632 Soybean plastid 58.61 58.61
KRH63005 Soybean nucleus 58.2 58.2
GSMUA_Achr7P09970_001 Banana nucleus 50.41 58.16
CDX77055 Canola cytosol 98.98 56.23
EES00213 Sorghum cytosol, plastid 56.35 55.67
Os01t0174700-01 Rice cytosol 55.12 54.56
TraesCS3D01G129100.1 Wheat cytosol 54.1 54.32
Zm00001d039654_P001 Maize cytosol 55.33 54.22
TraesCS3A01G128200.1 Wheat cytosol 53.69 54.02
TraesCS3B01G147300.1 Wheat cytosol 53.28 53.61
HORVU3Hr1G024030.1 Barley cytosol 53.89 49.72
CDX84294 Canola cytosol, plastid 41.6 46.24
CDY17273 Canola cytosol 41.39 46.01
CDY43662 Canola cytosol 40.78 45.33
CDY20744 Canola cytosol, plastid 43.65 44.19
CDY06552 Canola cytosol, plastid 43.65 44.01
CDY11972 Canola cytosol, plastid 43.44 43.09
CDY36769 Canola cytosol, plastid 43.24 42.89
CDY08710 Canola cytosol, plastid 38.52 42.63
CDY28629 Canola cytosol, plastid 43.24 42.2
CDY17366 Canola cytosol, plastid 43.24 42.2
CDX74407 Canola cytosol, plastid 40.16 41.0
CDY33329 Canola cytosol 40.57 40.66
CDX89320 Canola cytosol 42.21 40.16
CDX94306 Canola cytosol 42.01 39.96
CDY30287 Canola cytosol, plastid 40.37 39.24
CDY17708 Canola cytosol 44.26 38.99
CDY35093 Canola cytosol 40.57 38.82
CDX77795 Canola cytosol 44.47 38.0
CDX98447 Canola nucleus 36.48 37.55
CDX97569 Canola nucleus 36.68 37.37
CDY30659 Canola nucleus 37.3 37.07
CDY67737 Canola nucleus 37.3 36.99
CDX74691 Canola cytosol 42.01 36.8
CDY56474 Canola cytosol 42.01 35.84
CDX83710 Canola cytosol, plastid 39.96 35.52
CDY42166 Canola cytosol, plastid 39.34 33.74
CDY08414 Canola cytosol, plastid 39.34 33.63
CDY50542 Canola cytosol 39.34 33.57
CDY13725 Canola plastid 39.14 33.16
CDY30488 Canola cytosol 41.6 32.85
CDY23458 Canola cytosol 41.8 31.58
CDY13336 Canola cytosol, plastid 40.98 28.74
CDX75049 Canola cytosol 38.52 26.0
CDX67542 Canola cytosol 41.8 25.4
CDX84133 Canola cytosol 38.93 24.71
CDX76251 Canola cytosol 38.93 23.09
CDX70297 Canola cytosol 40.16 22.35
CDY10368 Canola cytosol 40.37 21.79
CDX73596 Canola cytosol 41.39 20.1
CDX78131 Canola cytosol 41.39 20.0
CDY33330 Canola cytosol, mitochondrion, nucleus 5.94 17.79
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.6.5Gene3D:3.30.200.20GO:A0A078IDX2UniProt:A0A078IDX2EnsemblPlants:CDY48186
ProteinID:CDY48186ProteinID:CDY48186.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00089001001InterPro:IPR000719
InterPro:Kinase-like_dom_sfPFAM:PF00069ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24351PANTHER:PTHR24351:SF70
InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EEA1E3SEG:seg
Description
BnaA04g15500DBnaA04g15500D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDX2]
Coordinates
chrLK032758:+:79581..82053
Molecular Weight (calculated)
55429.9 Da
IEP (calculated)
8.745
GRAVY (calculated)
-0.431
Length
488 amino acids
Sequence
(BLAST)
001: MANSTKSYKD HESDYETSTA GPDSSRRTSW LSSSFTASPS CSSSISHLSN HHDLNTYNHQ SKPHKANQIA WEAMARLRRR CGRAVGLEHF RLLKRLGSGD
101: IGSVYLCQIR GSPEVAFYAM KVVDKEAVAV KKKLGRAEME KKILGMLDHP FCPTLYAAFE ASHYSFLVME YCPGGDLYTA RLRQQSKRFG ISSTRFYAAE
201: TLVALEYLHM MGIVYRDLKP ENVLIRGDGH VMLSDFDLSF KCNVVPQLLN HNDYDRQVHD YDDDDDDFSI CSTPSCTTTP LHPVISCFSP ASSRRRRRKN
301: VITTTIHETA AYLSGGCPSI FAEPINARSK SFVGTHEYLA PEVISGQGHG SAVDWWTFGV FMYEMIFGTT PFKGDNNEKT LVNILKAPLT FPKVVVNSQK
401: EYDNMVSAQD LITKLLVKNP KKRLGSLKGS IEIKRHEFFE GVNWALIRSI KPPWSDNRSV NYFLPPRFMM TRKERDEPYH VSNHFDYF
Best Arabidopsis Sequence Match ( AT2G26700.1 )
(BLAST)
001: MANSSIFYKD NESDYESSTV GPDSSRRTSW LSSSFTASPS CSSISHLSNH GLNSYNQSKP HKANQVAWEA MARLRRCCGR AVGLEHFRLL KRLGSGDIGS
101: VYLCQIRGSP ETAFYAMKVV DKEAVAVKKK LGRAEMEKKI LGMLDHPFCP TLYAAFEASH YSFLVMEYCP GGDLYAVRLR QPSKRFTISS TRFYAAETLV
201: ALEYLHMMGI VYRDLKPENV LIREDGHVML SDFDLSFKCD VVPQFLSDND RDRGHQEDDD DISIRRKCST PSCTTTPLNP VISCFSPTSS RRRKKNVVTT
301: TIHENAAGTS DSVKSNDVSR TFSRSPSSCS RVSNGLRDIS GGCPSIFAEP INARSKSFVG THEYLAPEVI SGQGHGSAVD WWTYGIFLYE MIFGRTPFKG
401: DNNEKTLVNI LKAPLTFPKV IVNSPKEYED MVNAQDLIIK LLVKNPKKRL GSLKGSIEIK RHEFFEGVNW ALIRSIKPPW VPKEETSHKT KGDNRSVNYY
501: LPPRFMMSRK ERNEPYHVSN YFDYF
Arabidopsis Description
PID2Protein kinase PINOID 2 [Source:UniProtKB/Swiss-Prot;Acc:Q64FQ2]
SUBAcon: [cytosol,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.