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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX70218
CDY44862

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G26610.1 CDX70218 AT5G04510.1 16973627
AT4G26610.1 CDY44862 AT5G04510.1 16973627
AT4G26610.1 CDX70218 AT5G04510.1 21798944
AT4G26610.1 CDY44862 AT5G04510.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026417.1-P Field mustard cytosol 98.44 98.44
CDX89320 Canola cytosol 98.05 98.05
AT4G26610.1 Thale cress cytosol 86.94 88.14
CDY36769 Canola cytosol, plastid 81.48 84.96
CDY11972 Canola cytosol, plastid 81.48 84.96
CDY17366 Canola cytosol, plastid 82.46 84.6
CDY20744 Canola cytosol, plastid 79.14 84.23
CDY28629 Canola cytosol, plastid 82.07 84.2
CDY06552 Canola cytosol, plastid 79.34 84.09
CDY17708 Canola cytosol 68.03 63.0
CDX77795 Canola cytosol 68.23 61.3
Solyc04g015130.2.1 Tomato cytosol, plastid 71.93 60.79
PGSC0003DMT400050818 Potato cytosol 71.93 60.79
CDX83710 Canola cytosol, plastid 60.82 56.83
CDX74407 Canola cytosol, plastid 52.83 56.69
CDY30287 Canola cytosol, plastid 53.22 54.38
CDY33329 Canola cytosol 50.88 53.59
CDY13725 Canola plastid 59.06 52.6
CDX74691 Canola cytosol 56.34 51.89
CDY35093 Canola cytosol 50.88 51.18
CDY56474 Canola cytosol 56.34 50.52
CDY42166 Canola cytosol, plastid 51.85 46.75
CDY08414 Canola cytosol, plastid 51.85 46.58
CDY08710 Canola cytosol, plastid 39.96 46.49
CDY50542 Canola cytosol 50.88 45.63
CDX84294 Canola cytosol, plastid 38.99 45.56
CDY30488 Canola cytosol 54.39 45.15
CDY17273 Canola cytosol 38.4 44.87
CDY43662 Canola cytosol 37.82 44.19
CDY23458 Canola cytosol 53.8 42.72
CDY48186 Canola cytosol 39.96 42.01
CDX98447 Canola nucleus 35.09 37.97
CDX97569 Canola nucleus 34.89 37.37
CDY13336 Canola cytosol, plastid 50.49 37.21
CDY30659 Canola nucleus 34.11 35.64
CDY67737 Canola nucleus 34.11 35.57
CDX75049 Canola cytosol 47.37 33.61
CDX67542 Canola cytosol 50.1 32.01
CDX84133 Canola cytosol 47.76 31.86
CDX70297 Canola cytosol 50.49 29.53
CDX76251 Canola cytosol 47.17 29.4
CDY10368 Canola cytosol 50.68 28.76
CDX73596 Canola cytosol 50.49 25.77
CDX78131 Canola cytosol 50.49 25.64
CDX77055 Canola cytosol 39.96 23.86
CDY33330 Canola cytosol, mitochondrion, nucleus 7.21 22.7
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.6.5Gene3D:3.30.200.20GO:A0A078DYM5EnsemblPlants:CDX94306ProteinID:CDX94306
ProteinID:CDX94306.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488
GO:GO:0005524GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00157401001InterPro:IPR000719InterPro:Kinase-like_dom_sf
PFAM:PF00069ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24351PANTHER:PTHR24351:SF112InterPro:Prot_kinase_dom
SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EF40C5SEG:seg:
Description
BnaC01g18780D
Coordinates
chrLK031881:-:120615..123230
Molecular Weight (calculated)
56633.4 Da
IEP (calculated)
8.171
GRAVY (calculated)
-0.361
Length
513 amino acids
Sequence
(BLAST)
001: MASKSGPGVL SEHNKENDDE KTSEASVSSS SQSISVSTLA DQVSSTLSMA QSGGSKSSGE VKLNEQSDLA ETGKRNTYRP STSSDISDES TCSGLSTNKP
101: HKANDVRWEA IQVVRAKQGS LGLNHFRLLK RVGGGDIGTV HLAELHGTRC YFAMKVMDKG ALASRKKLLR VQTEREILQC LDHPFLPTLY SHFETEKFSC
201: LVMEFCPGGD LHTLRQRQPG KRFIEQAAKF YVAEVLLAME YLHMLGIIYR DLKPENVLVR DDGHVMLTDF DLSLRCTVSP TVVRSTILVS EALQRNSGNC
301: AQPACIQQPS CMSAPTTCFS PRFFSSKSKK DKKDKKTKTE TGNQVTPLPE LIAEPTSARS MSFVGTHEYL APEIIKGEGH GSAVDWWTFG IFLYELLFGK
401: TPFKGSGNRA TLFNVVGQPL RFPESPVVSF AARDLIRSLL VKEPQHRLAY KRGATEIKQH PFFEGVNWAL VRCASPPEIP KQVEFENAPA TPAPATSTSV
501: KCDQSSYLDF DFF
Best Arabidopsis Sequence Match ( AT4G26610.1 )
(BLAST)
001: MASKYGSGVL PENKKEKGDK ETPETSYSSQ SVSVNTLADQ VSSTLSFAPS SDSKTGGEVK FNEKSDQSGK SNTCRPSTSS DISDESTCSS FSGNNKPHKA
101: NDVRWEAIQA VRTKHGVLGL NHFRLLKRLG CGDIGTVHLA ELHGTRCFFA MKVMDKGALA SRKKLLRAQT EREILQCLDH PFLPTLYSHF ETEKFSCLVM
201: EFCPGGDLHT LRQRQPGKRF SEQAAKFYVA EVLLAMEYLH MLGIIYRDLK PENVLVRDDG HVMLSDFDLS LRCTVSPTVV RSTVLASEGQ KNSGYCAQPA
301: CIQQPSCISA PTTCFSPRYF SSKSKKDKKM KNETGNQVSP LPELVAEPTS ARSMSFVGTH EYLAPEIIKG EGHGSAVDWW TFGIFLYELL FGKTPFKGSG
401: NRATLFNVVG QPLRFPESPV VSFAARDLIR SLLVKEPQHR LAYKRGATEM KQHPFFEGVN WALVRCASPP EIPKPVDYES APATPAAATS TSVKSDQSNY
501: LEFDFF
Arabidopsis Description
D6PKL1Serine/threonine-protein kinase D6PKL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUA3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.