Factsheet for Solyc04g015130.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

nucleus 3
plastid 3
vacuole 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g071750.2.1
Solyc11g007760.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26610.1	Solyc03g071750.2.1	AT5G04510.1	16973627
AT4G26610.1	Solyc11g007760.1.1	AT5G04510.1	16973627
AT4G26610.1	Solyc03g071750.2.1	AT5G04510.1	21798944
AT4G26610.1	Solyc11g007760.1.1	AT5G04510.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050818	Potato	cytosol	98.68	98.68
Bra035592.1-P	Field mustard	cytosol	47.28	79.28
CDY06552	Canola	cytosol, plastid	60.13	75.41
CDY20744	Canola	cytosol, plastid	59.64	75.1
CDY36769	Canola	cytosol, plastid	60.3	74.39
Bra028955.1-P	Field mustard	cytosol, plastid	60.3	74.39
CDY11972	Canola	cytosol, plastid	60.3	74.39
AT4G26610.1	Thale cress	cytosol	61.94	74.31
AT5G55910.2	Thale cress	cytosol, plastid	60.79	74.1
CDY17366	Canola	cytosol, plastid	60.79	73.8
Bra002868.1-P	Field mustard	cytosol, plastid	60.63	73.6
Solyc07g065710.2.1	Tomato	plastid	73.15	73.51
CDY28629	Canola	cytosol, plastid	60.46	73.4
CDX89320	Canola	cytosol	61.12	72.32
Bra026417.1-P	Field mustard	cytosol	61.12	72.32
CDX94306	Canola	cytosol	60.79	71.93
Solyc10g005770.2.1	Tomato	plastid	72.32	71.61
Solyc12g017390.1.1	Tomato	cytosol	48.76	63.38
Solyc02g087510.2.1	Tomato	cytosol	51.24	59.81
Solyc02g093360.2.1	Tomato	cytosol	59.8	58.08
Solyc02g067830.2.1	Tomato	cytosol	58.15	56.3
Solyc01g090240.2.1	Tomato	cytosol	57.99	50.29
Solyc12g006690.1.1	Tomato	nucleus, plastid	38.06	50.0
Solyc11g007250.1.1	Tomato	nucleus	36.74	48.58
Solyc11g067080.1.1	Tomato	nucleus	36.41	47.84
Solyc10g038190.1.1	Tomato	cytosol	53.05	46.2
Solyc07g056400.1.1	Tomato	nucleus	33.11	41.61
Solyc11g067070.1.1	Tomato	cytosol	48.6	35.29
Solyc06g074480.2.1	Tomato	cytosol	47.78	33.92
Solyc10g083500.1.1	Tomato	nucleus	48.43	29.25
Solyc09g009380.2.1	Tomato	cytosol	49.09	29.22

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	UniProt:K4BQ16
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF112
InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc04g015130.2	EnsemblPlants:Solyc04g015130.2.1
UniParc:UPI00027669C6	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4:-:5292846..5295967

Molecular Weight (calculated)

66518.0 Da

IEP (calculated)

8.617

GRAVY (calculated)

-0.415

Length

607 amino acids

Sequence
(BLAST)

001: MASNFGASAP LEPKQKPVGA RQTAETNDSS SFLTQVSKMN ELSLALSGKL PESGKITTHD VDGVRNNKKC QKGSNDLSID KSKNAPTDIQ NVSTPGNHEV
101: NGTRSSLESS TDQEKKTSNQ TSGKNSSVSA KVSDGTSSLA KNSGSGKISD HADLVESGKS SMCRGSTSTD VSDESTFSSF SSSVNKPHKT NDVRWEAIQA
201: VRSKDGSLGL SHFRLLKRLG CGDIGSVYLA ELSGTKCYFA MKVMDKASLA SRKKLLRAQT EREILSSLDH PFLPSLYSHF ETDKFSCLVM EFCPGGDLHT
301: LRQRQPGKHF SEQAVKFYVA EVLLALEYLH MLGIIYRDLK PENVLVREDG HIMLSDFDLS LCCSFSPTLV KTSSLELEPL KKNSGYCVQP ACIEPSCIQP
401: SCVVPTTCFS RRIFSSKSKK DRKPKNDVGN QVRPLPELMA EPTSARSMSF VGTHEYLAPE IIKGEGHGSA VDWWTFGIFL YELLFGKTPF KGSGNRATLF
501: NVVGQPLRFP ESPVVSFAAR DLIRGLLIKE PQNRLAYKRG ATEIKQHPFF EGVNWALIRC ASPPEVPKPV EFERLPVPAP STNQKTVPAA VAPSQKGSDN
601: YLEFDFF

Best Arabidopsis Sequence Match ( AT5G47750.1 )
(BLAST)

001: MASTRKPSGH GAEVEAQKRS SSNSSTKSAK AETFEPMQLQ RSVTNPRAVG IPESKRLPES FRKRSSDPAV CKPDFSSLST VLEHVDSLTI DEKKTSGFGS
101: VKTSSASAKL SDGTSSLGKT SGSAKLSGRL DFMESGKSSI CRGSTSSDVS DESSCSSFSS TVNKPHKAND LRWEAIQAVR VRDGLLGLSH FRLLKRLGCG
201: DIGSVYLSEL SGTKCYFAMK VMDKTSLASR KKLLRAQTER EILQSLDHPF LPTLYTHFET EKFSCLVMEF CPGGDLHTLR QRQPGKHFSE QAVKFYIAES
301: LLALEYLHML GIVYRDLKPE NVLVREDGHI MLSDFDLSLR CLVSPTLVKS AAIESDPLRK NVYCVQPACI EPSCIQPSCT VPTTCFSPRL FSSKSKKDRK
401: PKNDTANQVR PLPELVAEPT DARSMSFVGT HEYLAPEIIK GEGHGSAVDW WTFGIFLYEL LFGRTPFKGS GNRQTLFNVV GQPLRFPETP VVSFAARDLI
501: RGLLMKEPQQ RLGFKRGATE VKQHPFFEGV NWALIRCATP PEIPKPVELE KGAVSVAEAP SSQKTAAGLV LNAQKGSDNY LEFDFF

Arabidopsis Description

D6PKL2Serine/threonine-protein kinase D6PKL2 [Source:UniProtKB/Swiss-Prot;Acc:Q39183]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.