CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX70218
CDY44862

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G40030.1	CDX70218	AT5G04510.1	16973627
AT5G40030.1	CDY44862	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025621.1-P	Field mustard	cytosol, plastid	97.49	94.52
CDY30287	Canola	cytosol, plastid	99.16	94.42
AT5G40030.1	Thale cress	cytosol, plastid	93.1	89.18
PGSC0003DMT400003557	Potato	cytosol, plastid	72.18	66.35
Solyc02g087510.2.1	Tomato	cytosol	71.97	66.15
VIT_14s0066g02140.t01	Wine grape	cytosol	71.34	63.38
CDY20744	Canola	cytosol, plastid	56.9	56.43
CDY06552	Canola	cytosol, plastid	56.9	56.2
CDY11972	Canola	cytosol, plastid	56.69	55.08
CDY36769	Canola	cytosol, plastid	56.49	54.88
CDY28629	Canola	cytosol, plastid	57.32	54.8
CDY17366	Canola	cytosol, plastid	57.11	54.6
CDX94306	Canola	cytosol	56.69	52.83
CDX89320	Canola	cytosol	56.49	52.63
CDY17708	Canola	cytosol	59.2	51.08
CDY33329	Canola	cytosol	51.88	50.92
CDX77795	Canola	cytosol	59.41	49.74
CDY35093	Canola	cytosol	51.67	48.43
CDX74691	Canola	cytosol	56.07	48.11
CDX83710	Canola	cytosol, plastid	54.18	47.18
CDY56474	Canola	cytosol	56.07	46.85
CDY42166	Canola	cytosol, plastid	54.39	45.69
CDY08414	Canola	cytosol, plastid	54.39	45.53
CDY08710	Canola	cytosol, plastid	41.42	44.9
CDY50542	Canola	cytosol	53.56	44.76
CDY13725	Canola	plastid	52.72	43.75
CDX84294	Canola	cytosol, plastid	38.91	42.37
CDY17273	Canola	cytosol	38.7	42.14
CDY43662	Canola	cytosol	38.7	42.14
CDY30488	Canola	cytosol	53.97	41.75
CDY23458	Canola	cytosol	54.6	40.4
CDY48186	Canola	cytosol	41.0	40.16
CDX97569	Canola	nucleus	36.82	36.74
CDX98447	Canola	nucleus	36.19	36.5
CDY30659	Canola	nucleus	36.61	35.64
CDY67737	Canola	nucleus	36.4	35.37
CDY13336	Canola	cytosol, plastid	51.46	35.34
CDX75049	Canola	cytosol	48.54	32.09
CDX67542	Canola	cytosol	52.3	31.13
CDX84133	Canola	cytosol	47.91	29.78
CDX70297	Canola	cytosol	50.84	27.71
CDX76251	Canola	cytosol	47.7	27.7
CDY10368	Canola	cytosol	50.84	26.88
CDX73596	Canola	cytosol	51.46	24.48
CDX78131	Canola	cytosol	51.46	24.36
CDX77055	Canola	cytosol	41.42	23.05
CDY33330	Canola	cytosol, mitochondrion, nucleus	7.32	21.47

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	GO:A0A078CC13	EnsemblPlants:CDX74407	ProteinID:CDX74407
ProteinID:CDX74407.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00114254001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF84	InterPro:Prot_kinase_dom
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0004EE7B3D	SEG:seg	:

Description

BnaA04g09820D

Coordinates

chrLK031801:+:9091..11024

Molecular Weight (calculated)

53086.5 Da

IEP (calculated)

8.026

GRAVY (calculated)

-0.328

Length

478 amino acids

Sequence
(BLAST)

001: MSRQTPNLES SHDSSSNADS SQVSGSESFK PSSSNGSQDV RLNNSVSLSL CSSNSVSSEA NLEKSQSFDT NEAAFKRVFS PSKPHKGNDL RWDAIQSVKC
101: SKNEDLGLGH FRLLKKLGCG DIGSVYLAEL REMGCFFAMK VMDKGMLVGR KKLVRAQTER EILGLLDHPF LPTLYSHFET EKFSCLLMEF CSGGDLHILR
201: QKQPGKHFSE QAARFYASEV LLALEYLHMM GVVYRDLKPE NVMVREDGHI MLSDFDLSLQ SFASPTLIQS TSQPSCDMAS YCVQPSCIVD PSCKLPIACI
301: QPSCFKPRFL NGKPRKANKT EKGGSDSLPM LIAEPTDARS MSFVGTHEYL APEIIRGDGH GSSVDWWTFG IFLYELLTGK TPFKGNGNRE TLFNVVGQPL
401: KFPEGSISFA AKDLIRGLLA KDPKKRLGFK KGATEIKQHP FFNNVNWALI RSTNPPEIPK PIDLSILNET LKSSFEFF

Best Arabidopsis Sequence Match ( AT5G40030.1 )
(BLAST)

001: MSKQTPNLES LQDCSSSNYN NANASPVSGS ASFKTSSNGS EDVRLNNSIS LSFCSSNSVS SEANLEKTQS FDANEANFKR VFAPSKPHKG NDLRWDAIQN
101: VKCSKNEDLG LGHFRLLKKL GCGDIGSVYL AELREMGCFF AMKVMDKGML IGRKKLVRAQ TEREILGLLD HPFLPTLYSH FETEKFSCLL MEFCSGGDLH
201: ILRQKQPGKH FSELAARFYA SEVLLALEYL HMMGVVYRDL KPENVMVRED GHIMLSDFDL SLQSFVSPTL IQSTSQPSCH IASYCIQPPC IDPSCKLPVA
301: CIQPSCFKPR FLNNKPRKAK TEKAGSDSLP MLIAEPTAAR SMSFVGTHEY LAPEIIRGDG HGSSVDWWTF GIFLYELLTG KTPFKGNGNR ETLFNVVGQP
401: LKFPEGSISF AAKDLIRGLL TKDPKKRLGF KKGATEIKQH PFFNNVNWAL IRSTTPPEIP KPIDLSILNE TLKSSVQQQG KHSKQSDSSS GPYLDFEFF

Arabidopsis Description

Protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9LUK3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.