Factsheet for AT5G40030.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74407	Canola	cytosol, plastid	89.18	93.1
Bra025621.1-P	Field mustard	cytosol, plastid	90.98	92.09
CDY30287	Canola	cytosol, plastid	92.59	92.03
PGSC0003DMT400003557	Potato	cytosol, plastid	71.34	68.46
Solyc02g087510.2.1	Tomato	cytosol	71.14	68.27
VIT_14s0066g02140.t01	Wine grape	cytosol	71.34	66.17
AT5G55910.2	Thale cress	cytosol, plastid	55.31	55.42
AT4G26610.1	Thale cress	cytosol	55.71	54.94
AT1G16440.1	Thale cress	cytosol	51.1	51.1
AT5G47750.1	Thale cress	cytosol, plastid	58.32	49.66
AT1G79250.2	Thale cress	cytosol	52.51	47.21
AT3G27580.1	Thale cress	cytosol, plastid	54.11	46.71
AT3G12690.2	Thale cress	cytosol	52.91	45.75
AT3G44610.1	Thale cress	cytosol, plastid	39.88	44.12
AT2G34650.1	Thale cress	cytosol	37.47	42.69
AT2G26700.1	Thale cress	cytosol, plastid	40.68	38.67
AT3G14370.1	Thale cress	nucleus	35.27	36.67
AT1G53700.1	Thale cress	cytosol	34.87	36.55
AT2G44830.2	Thale cress	cytosol	55.11	35.95
AT3G52890.4	Thale cress	cytosol	50.1	26.77
AT2G36350.1	Thale cress	cytosol	50.1	26.34
AT5G03640.1	Thale cress	nucleus	48.5	26.13

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	EntrezGene:834000	ProteinID:AED94503.1	ArrayExpress:AT5G40030
EnsemblPlantsGene:AT5G40030	RefSeq:AT5G40030	TAIR:AT5G40030	RefSeq:AT5G40030-TAIR-G	EnsemblPlants:AT5G40030.1	TAIR:AT5G40030.1
ProteinID:BAA97351.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
RefSeq:NP_198819.1	PFAM:PF00069	PO:PO:0000037	PO:PO:0001078	PO:PO:0001081	PO:PO:0004507
PO:PO:0007611	PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009046	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF84	InterPro:Prot_kinase_dom	UniProt:Q9LUK3	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000009DBDD	SEG:seg	:	:

Description

Protein kinase [Source:UniProtKB/TrEMBL;Acc:Q9LUK3]

Coordinates

chr5:+:16026047..16028483

Molecular Weight (calculated)

55498.5 Da

IEP (calculated)

8.364

GRAVY (calculated)

-0.331

Length

499 amino acids

Sequence
(BLAST)

001: MSKQTPNLES LQDCSSSNYN NANASPVSGS ASFKTSSNGS EDVRLNNSIS LSFCSSNSVS SEANLEKTQS FDANEANFKR VFAPSKPHKG NDLRWDAIQN
101: VKCSKNEDLG LGHFRLLKKL GCGDIGSVYL AELREMGCFF AMKVMDKGML IGRKKLVRAQ TEREILGLLD HPFLPTLYSH FETEKFSCLL MEFCSGGDLH
201: ILRQKQPGKH FSELAARFYA SEVLLALEYL HMMGVVYRDL KPENVMVRED GHIMLSDFDL SLQSFVSPTL IQSTSQPSCH IASYCIQPPC IDPSCKLPVA
301: CIQPSCFKPR FLNNKPRKAK TEKAGSDSLP MLIAEPTAAR SMSFVGTHEY LAPEIIRGDG HGSSVDWWTF GIFLYELLTG KTPFKGNGNR ETLFNVVGQP
401: LKFPEGSISF AAKDLIRGLL TKDPKKRLGF KKGATEIKQH PFFNNVNWAL IRSTTPPEIP KPIDLSILNE TLKSSVQQQG KHSKQSDSSS GPYLDFEFF

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.