Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G16440.1 | CDX70218 | AT5G04510.1 | 16973627 |
| AT1G16440.1 | CDY44862 | AT5G04510.1 | 16973627 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35093 | Canola | cytosol | 98.56 | 94.12 |
| AT1G16440.1 | Thale cress | cytosol | 84.39 | 82.36 |
| VIT_19s0085g01140.t01 | Wine grape | cytosol | 66.32 | 73.24 |
| PGSC0003DMT400025008 | Potato | cytosol | 67.15 | 72.67 |
| Solyc12g017390.1.1 | Tomato | cytosol | 67.35 | 70.24 |
| KRH13830 | Soybean | cytosol | 66.74 | 56.42 |
| KRH43612 | Soybean | cytosol | 67.35 | 55.97 |
| KRH44814 | Soybean | cytosol | 64.27 | 55.89 |
| CDY06552 | Canola | cytosol, plastid | 53.8 | 54.13 |
| CDY20744 | Canola | cytosol, plastid | 53.39 | 53.94 |
| CDY42166 | Canola | cytosol, plastid | 62.42 | 53.43 |
| CDY08414 | Canola | cytosol, plastid | 62.01 | 52.89 |
| CDY11972 | Canola | cytosol, plastid | 53.39 | 52.85 |
| CDY36769 | Canola | cytosol, plastid | 53.18 | 52.64 |
| CDY50542 | Canola | cytosol | 61.81 | 52.62 |
| CDY17366 | Canola | cytosol, plastid | 54.0 | 52.6 |
| CDY28629 | Canola | cytosol, plastid | 53.8 | 52.4 |
| CDX74407 | Canola | cytosol, plastid | 50.92 | 51.88 |
| CDX94306 | Canola | cytosol | 53.59 | 50.88 |
| CDX89320 | Canola | cytosol | 53.39 | 50.68 |
| CDY30287 | Canola | cytosol, plastid | 51.54 | 50.0 |
| CDY17708 | Canola | cytosol | 55.65 | 48.92 |
| CDX77795 | Canola | cytosol | 56.06 | 47.81 |
| CDX83710 | Canola | cytosol, plastid | 52.77 | 46.81 |
| CDY08710 | Canola | cytosol, plastid | 42.09 | 46.49 |
| CDX74691 | Canola | cytosol | 51.95 | 45.42 |
| CDY56474 | Canola | cytosol | 52.16 | 44.41 |
| CDY13725 | Canola | plastid | 51.54 | 43.58 |
| CDY43662 | Canola | cytosol | 37.58 | 41.69 |
| CDX84294 | Canola | cytosol, plastid | 37.37 | 41.46 |
| CDY17273 | Canola | cytosol | 37.17 | 41.23 |
| CDY30488 | Canola | cytosol | 51.54 | 40.61 |
| CDY48186 | Canola | cytosol | 40.66 | 40.57 |
| CDY23458 | Canola | cytosol | 50.31 | 37.93 |
| CDX98447 | Canola | nucleus | 34.7 | 35.65 |
| CDX97569 | Canola | nucleus | 34.5 | 35.07 |
| CDY30659 | Canola | nucleus | 35.11 | 34.83 |
| CDY67737 | Canola | nucleus | 34.91 | 34.55 |
| CDY13336 | Canola | cytosol, plastid | 47.43 | 33.19 |
| CDY33330 | Canola | cytosol, mitochondrion, nucleus | 10.88 | 32.52 |
| CDX75049 | Canola | cytosol | 45.59 | 30.71 |
| CDX67542 | Canola | cytosol | 48.67 | 29.51 |
| CDX84133 | Canola | cytosol | 45.38 | 28.74 |
| CDX70297 | Canola | cytosol | 48.25 | 26.8 |
| CDX76251 | Canola | cytosol | 44.97 | 26.61 |
| CDY10368 | Canola | cytosol | 48.25 | 26.0 |
| CDX78131 | Canola | cytosol | 49.08 | 23.66 |
| CDX73596 | Canola | cytosol | 48.67 | 23.58 |
| CDX77055 | Canola | cytosol | 41.07 | 23.28 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.6.5 | Gene3D:3.30.200.20 | GO:A0A078H744 | UniProt:A0A078H744 | EnsemblPlants:CDY33329 |
| ProteinID:CDY33329 | ProteinID:CDY33329.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00054162001 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | PFAM:PF00069 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24351 | PANTHER:PTHR24351:SF55 |
| InterPro:Prot_kinase_dom | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0004EE402B | SEG:seg |
Description
BnaC05g12540DBnaC05g12540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H744]
Coordinates
chrLK032312:-:23972..27821
Molecular Weight (calculated)
54683.5 Da
IEP (calculated)
9.506
GRAVY (calculated)
-0.433
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLKPGSKVV SPKKSLHRDS ASTSQQQSSK DMEKQFDQKT KKVEGYLIKT ESSLTINLNT RLVHSTMSSR SNSMESTSSN KPHTGGDIRW DAVNYLKARG
101: LKLGISDFRV LKRLGYGDIG SVYLVELKGA HKTTYFAMKV MDRASLVSRN KLLRAQTERE ILSQLDHPFL PTLYSHFETD KFYCLVMEFC SGGNLYSLRQ
201: KQPNKCFTEE AARFFASEVL LALEYLHMLG IVYRDLKPEN VLVRDDGHIM LSDFDLSLRC SVNPTLVKSP SVHVSSSKTT TGIINDDAAV QGCYQPSTFF
301: PRILHSSKKN RKSKSDIGEG SLPELMAEPA NVKSMSFVGT HEYLAPEIIR NEGHGSAVDW WTFGIFIYEL LHGATPFKGQ GNKATLYNVI GQPLRFPEHS
401: QVSSTAKDLI KGLLVKEPQK RIAYKRGATE IKQHPFFEGV NWALIRGQAP PHVPEPVDFS YGGKEKKVCD KATRGGSDPD YIDFEYF
101: LKLGISDFRV LKRLGYGDIG SVYLVELKGA HKTTYFAMKV MDRASLVSRN KLLRAQTERE ILSQLDHPFL PTLYSHFETD KFYCLVMEFC SGGNLYSLRQ
201: KQPNKCFTEE AARFFASEVL LALEYLHMLG IVYRDLKPEN VLVRDDGHIM LSDFDLSLRC SVNPTLVKSP SVHVSSSKTT TGIINDDAAV QGCYQPSTFF
301: PRILHSSKKN RKSKSDIGEG SLPELMAEPA NVKSMSFVGT HEYLAPEIIR NEGHGSAVDW WTFGIFIYEL LHGATPFKGQ GNKATLYNVI GQPLRFPEHS
401: QVSSTAKDLI KGLLVKEPQK RIAYKRGATE IKQHPFFEGV NWALIRGQAP PHVPEPVDFS YGGKEKKVCD KATRGGSDPD YIDFEYF
001: MLLKPGNKLV SPETSHHRDS ASNSSNHKCQ QQKPRKDKQK QVEQNTKKIE EHQIKSESTL LISNHNVNMS SQSNNSESTS TNNSSKPHTG GDIRWDAVNS
101: LKSRGIKLGI SDFRVLKRLG YGDIGSVYLV ELKGANPTTY FAMKVMDKAS LVSRNKLLRA QTEREILSQL DHPFLPTLYS HFETDKFYCL VMEFCSGGNL
201: YSLRQKQPNK CFTEDAARFF ASEVLLALEY LHMLGIVYRD LKPENVLVRD DGHIMLSDFD LSLRCSVNPT LVKSFNGGGT TGIIDDNAAV QGCYQPSAFF
301: PRMLQSSKKN RKSKSDFDGS LPELMAEPTN VKSMSFVGTH EYLAPEIIKN EGHGSAVDWW TFGIFIYELL HGATPFKGQG NKATLYNVIG QPLRFPEYSQ
401: VSSTAKDLIK GLLVKEPQNR IAYKRGATEI KQHPFFEGVN WALIRGETPP HLPEPVDFSC YVKKEKESLP PAATEKKSKM FDEANKSGSD PDYIVFEYF
101: LKSRGIKLGI SDFRVLKRLG YGDIGSVYLV ELKGANPTTY FAMKVMDKAS LVSRNKLLRA QTEREILSQL DHPFLPTLYS HFETDKFYCL VMEFCSGGNL
201: YSLRQKQPNK CFTEDAARFF ASEVLLALEY LHMLGIVYRD LKPENVLVRD DGHIMLSDFD LSLRCSVNPT LVKSFNGGGT TGIIDDNAAV QGCYQPSAFF
301: PRMLQSSKKN RKSKSDFDGS LPELMAEPTN VKSMSFVGTH EYLAPEIIKN EGHGSAVDWW TFGIFIYELL HGATPFKGQG NKATLYNVIG QPLRFPEYSQ
401: VSSTAKDLIK GLLVKEPQNR IAYKRGATEI KQHPFFEGVN WALIRGETPP HLPEPVDFSC YVKKEKESLP PAATEKKSKM FDEANKSGSD PDYIVFEYF
Arabidopsis Description
RHS3Serine/threonine-protein kinase RHS3 [Source:UniProtKB/Swiss-Prot;Acc:F4I4F2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.