CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
vacuole 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG92082
KRH34704

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G16440.1	KRG92082	AT5G04510.1	16973627
AT1G16440.1	KRH34704	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43612	Soybean	cytosol	94.44	92.83
VIT_19s0085g01140.t01	Wine grape	cytosol	60.94	79.59
PGSC0003DMT400025008	Potato	cytosol	59.9	76.67
Solyc12g017390.1.1	Tomato	cytosol	60.76	74.95
Bra026056.1-P	Field mustard	cytosol	55.21	71.78
CDY33329	Canola	cytosol	56.42	66.74
KRH44814	Soybean	cytosol	64.76	66.61
CDY35093	Canola	cytosol	56.6	63.92
AT1G16440.1	Thale cress	cytosol	55.03	63.53
GSMUA_Achr2P19230_001	Banana	cytosol	50.35	61.7
AT1G79250.2	Thale cress	cytosol	58.85	61.08
HORVU5Hr1G108690.2	Barley	cytosol	52.26	58.67
TraesCS5D01G460900.1	Wheat	cytosol, mitochondrion	52.43	58.3
TraesCS5B01G459300.1	Wheat	cytosol	52.08	57.92
Zm00001d039282_P001	Maize	cytosol	50.17	57.8
EER99999	Sorghum	cytosol, plastid	53.82	57.62
Os01t0233800-01	Rice	plasma membrane	52.95	57.33
CDY42166	Canola	cytosol, plastid	56.25	56.94
Bra034743.1-P	Field mustard	cytosol, plastid	56.42	56.92
CDY08414	Canola	cytosol, plastid	56.42	56.92
AT3G12690.2	Thale cress	cytosol	56.94	56.85
TraesCS1A01G133200.1	Wheat	cytosol	53.99	56.14
Bra038744.1-P	Field mustard	cytosol	55.73	56.12
TraesCS1B01G152700.1	Wheat	cytosol	53.82	55.96
HORVU1Hr1G031420.1	Barley	cytosol	53.82	55.86
CDY50542	Canola	cytosol	55.38	55.77
Zm00001d037782_P001	Maize	cytosol	52.95	55.25
Zm00001d015925_P001	Maize	cytosol	50.0	55.07
TraesCS5A01G450900.1	Wheat	plastid	53.82	54.48
Os05t0237400-01	Rice	plasma membrane	53.99	54.18
OQU84819	Sorghum	cytosol	49.83	53.85
OQU77686	Sorghum	cytosol	52.6	53.72
TraesCS3A01G157100.1	Wheat	cytosol	55.21	53.45
TraesCS3B01G183500.2	Wheat	cytosol	55.38	52.99
TraesCS3D01G164700.1	Wheat	cytosol	55.38	52.9
HORVU3Hr1G031930.2	Barley	cytosol	54.69	52.24
TraesCS1D01G124200.2	Wheat	cytosol	54.51	50.48
KRH36626	Soybean	cytosol	52.78	50.0
Bra008404.1-P	Field mustard	nucleus	55.56	49.69
KRH11623	Soybean	cytosol	50.52	49.24
KRG93211	Soybean	cytosol	49.83	46.9
KRH26592	Soybean	nucleus	36.81	46.8
KRH34744	Soybean	cytosol	33.33	46.38
KRH30493	Soybean	cytosol, plastid	35.42	46.26
KRH25188	Soybean	nucleus, plastid	34.9	46.1
KRG92038	Soybean	cytosol	33.51	45.73
KRG94078	Soybean	cytosol, plastid	49.65	45.32
KRH07149	Soybean	cytosol	49.48	45.17
KRH22717	Soybean	nucleus	36.98	42.86
KRH21098	Soybean	cytosol, plastid	33.51	42.7
KRH56632	Soybean	plastid	36.11	42.62
GSMUA_Achr5P06950_001	Banana	cytosol, mitochondrion	50.35	42.46
KRH03726	Soybean	plastid	35.94	42.24
KRH63005	Soybean	nucleus	35.42	41.8
KRH59216	Soybean	cytosol	33.33	41.74
KRH43840	Soybean	cytosol	32.64	40.69
KRH48818	Soybean	cytosol	51.91	39.19
KRH01064	Soybean	cytosol	51.74	38.8
KRH66511	Soybean	nucleus	51.22	38.66
KRH40174	Soybean	cytosol	50.87	38.25
KRH13630	Soybean	nucleus	31.25	37.66
KRH62499	Soybean	cytosol	46.01	32.04
KRH56412	Soybean	cytosol	45.31	31.26
KRH32674	Soybean	cytosol	46.35	30.94
KRH30833	Soybean	cytosol	46.35	30.83
KRH67882	Soybean	cytosol	46.35	30.65
KRG96169	Soybean	cytosol	45.83	30.41
KRH23770	Soybean	cytosol	42.53	30.14

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100819001	MapMan:18.4.6.5	Gene3D:3.30.200.20	EMBL:ACUP02009792	EnsemblPlantsGene:GLYMA_15G266800
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	InterPro:IPR000719	UniProt:K7ME32	EnsemblPlants:KRH13830	ProteinID:KRH13830	ProteinID:KRH13830.1
ProteinID:KRH13831.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351
PANTHER:PTHR24351:SF55	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000296A1FE
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:50301070..50305210

Molecular Weight (calculated)

63506.9 Da

IEP (calculated)

8.316

GRAVY (calculated)

-0.516

Length

576 amino acids

Sequence
(BLAST)

001: MTSNPVKMPD LPETQMEHKL SEAAHPSAHS SSANSGNNSP THPKNVNQEA KDTSTTTVHY SGNETGHMDQ ASKTEANLEG KSRPQNLLPP NRNLSDFNPQ
101: QHQSPSTKKP NSNSDHHAKA MSVSTPQTKT STNQGQGSGA SSRSDSLEST SAPIRPHTGG DVRWEAINMI SRVGSLNLSH FRLLKRIGYG DIGSVYLVEL
201: KGTRTYFAMK VMDKAALISR NKLLRAQTER EILGLLDHPF LPTLYSYFET DKFYCLIMEF CSGGDLHSLR QKQPNKCFTE EAARFYASEV LLALEYLHML
301: GIVYRDLKPE NLLVRDEGHI MLSDFDLSLR CSVSPTLVKS SSAHAGNSSS SGNNDVGGIL TDDQAAQSTT QVSSFFPRIL PSKKNRKAKS DFGLLVGGGR
401: LPELMAEPTN VRSMSFVGTH EYLAPEIIKG EGHGSAVDWW TFGIFLYELL LGTTPFKGSG YKATLFNVVG QPLRFPETPQ VSAVARDLIR GLLVKEPQKR
501: IAYKRGATEI KQHPFFEGMN WALVRSATPP HIPEAIDFSK YASKDTATPA DKKMADIAND KHSNSATDSY IDFEYF

Best Arabidopsis Sequence Match ( AT1G79250.1 )
(BLAST)

001: MLTKPGKKLD SSESTHHTTS SNYPPLDIVH QTPQPRKEMQ QKPLFDPKKM DNLIKPEPAG FTNHHRPNPS PKIPSSPGSN MTESQSNLNT KPNNNNSNNN
101: SNMSSRSNSI ESTSSNPSKP HTGGDIRWDA VNTLTSKGVQ LGISDFRLLK RLGYGDIGSV YLVELRGTIT YFAMKVMDKA SLASRNKLLR AQTEREILSQ
201: LDHPFLPTLY SHFETDKFYC LVMEFCGGGN LYSLRQKQPN KCFTEDAARF FASEVLLALE YLHMLGIVYR DLKPENVLVR DDGHIMLSDF DLSLRCSVSP
301: TLVKSSSVHA AGGGSGSSRP VGLIDEDAAV QGCIQPSTFF PRILQSSKKN RKAKSDFGLF VNGSMPELMA EPTNVKSMSF VGTHEYLAPE IIRGEGHGSA
401: VDWWTFGIFI YELLYGATPF KGQGNRATLH NVIGQALRFP EVPHVSSAAR DLIKGLLVKE PQKRIAYKRG ATEIKQHPFF EGVNWALIRS ATPPHVPEPV
501: DFSCYASKDK ESMAAVDGGG KKNNNGAGGG CSTGGGDNKP NGDCNDPDYI DFEYF

Arabidopsis Description

AGC1-7Serine/threonine-protein kinase AGC1-7 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.