Factsheet for Os05t0237400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
vacuole 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G133200.1	Wheat	cytosol	73.17	75.81
TraesCS1B01G152700.1	Wheat	cytosol	73.17	75.81
HORVU1Hr1G031420.1	Barley	cytosol	72.82	75.32
Zm00001d037782_P001	Maize	cytosol	70.38	73.19
OQU77686	Sorghum	cytosol	70.03	71.28
VIT_19s0085g01140.t01	Wine grape	cytosol	54.7	71.2
PGSC0003DMT400025008	Potato	cytosol	55.57	70.89
Solyc12g017390.1.1	Tomato	cytosol	55.75	68.52
TraesCS1D01G124200.2	Wheat	cytosol	73.34	67.68
GSMUA_Achr3P16430_001	Banana	cytosol	40.24	66.57
Os01t0233800-01	Rice	plasma membrane	56.97	61.47
Os10t0562500-01	Rice	cytosol	42.51	57.28
KRH44814	Soybean	cytosol	54.18	55.54
KRH13830	Soybean	cytosol	54.18	53.99
Os12t0480200-01	Rice	cytosol	39.9	53.26
KRH43612	Soybean	cytosol	54.36	53.24
AT3G12690.2	Thale cress	cytosol	53.14	52.86
Bra038744.1-P	Field mustard	cytosol	52.26	52.45
CDY42166	Canola	cytosol, plastid	51.92	52.37
Bra034743.1-P	Field mustard	cytosol, plastid	51.92	52.19
CDY08414	Canola	cytosol, plastid	51.92	52.19
CDY50542	Canola	cytosol	51.92	52.1
Os12t0149700-01	Rice	cytosol	29.09	49.41
Os09t0258500-01	Rice	cytosol, plasma membrane	47.91	48.5
Os09t0478500-01	Rice	cytosol	47.74	47.0
Os08t0491200-01	Rice	cytosol	48.43	46.8
Os02t0725000-01	Rice	cytosol	47.04	45.92
Os11t0150700-00	Rice	cytosol, plastid	36.41	45.63
Os06t0291600-01	Rice	nucleus	46.69	45.5
Os01t0174700-01	Rice	cytosol	37.46	43.61
Os03t0642300-00	Rice	plastid	33.28	41.43
Os12t0614600-01	Rice	cytosol	34.84	41.32
Os02t0654300-01	Rice	cytosol	47.39	39.42
Os04t0546300-01	Rice	cytosol	47.21	38.99
Os03t0253200-01	Rice	nucleus	29.79	33.66
Os08t0491000-01	Rice	cytosol	13.24	18.77
Os04t0410200-00	Rice	cytosol	15.85	18.09

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	EntrezGene:4338179	ProteinID:AAT73640.1	ProteinID:AAU90155.1
EMBL:AK072256	EMBL:AK107045	ProteinID:BAF16906.1	ProteinID:BAS92947.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os05g0237400	EnsemblPlants:Os05t0237400-01	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24351	PANTHER:PTHR24351:SF55	InterPro:Prot_kinase_dom	UniProt:Q6F344	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI00003E1AEE	RefSeq:XP_015638794.1	RefSeq:XP_015638795.1	SEG:seg	:

Description

Similar to Viroid symptom modulation protein. (Os05t0237400-01)

Coordinates

chr5:+:8378906..8382300

Molecular Weight (calculated)

61437.1 Da

IEP (calculated)

7.479

GRAVY (calculated)

-0.364

Length

574 amino acids

Sequence
(BLAST)

001: MEDGMDFSPH KNSTEQNRTS FEEDDQFSIR SAPSKPSPDK KSKPKNKPNH HSDKTANPPP QRPETTAALV TTTAAAATAG TNRGEAVSNG SLDSISSGST
101: RSNSLESSST GAAAAPTVLT TSASTASVSA SGQNVKRHTG GDSRWEAVQA ATARDAPAPL SLAHFRLLKR LGYGDIGSVY LVELRGTSAF FAMKVMDKAS
201: IASRNKMARA ETEREILGLL DHPFLPTLYT HFETDKFYCL VMEYCSGGNL HSLRQKQPSK HFSEPAARFY VAEVLLALEY LHMLGIVYRD LKPENVLVRD
301: DGHIMLSDFD LSLRCTVCPT LVKSSSVHAT GSGGGIGSRG DAIDGGESMP ANQGCIQPSS FFPRILPRRS RKASKSDMGL LLNGAAAVEF NAEPTEARSM
401: SFVGTHEYLA PEIIRGEGHG SAVDWWTLGI FLYELIHGAT PFKGAGNRAT LCNVIEQPLR FPSDGGASAV ARDLIRGLLV KEPHKRIAFT RGATEIKQHP
501: FFDGVNWALV RSLTPPSVPE PVDFRQYAAA ASATTPKDKK PPENAAAAAA PAAADGGGAA NSSTGESYTD FEYF

Best Arabidopsis Sequence Match ( AT1G79250.1 )
(BLAST)

001: MLTKPGKKLD SSESTHHTTS SNYPPLDIVH QTPQPRKEMQ QKPLFDPKKM DNLIKPEPAG FTNHHRPNPS PKIPSSPGSN MTESQSNLNT KPNNNNSNNN
101: SNMSSRSNSI ESTSSNPSKP HTGGDIRWDA VNTLTSKGVQ LGISDFRLLK RLGYGDIGSV YLVELRGTIT YFAMKVMDKA SLASRNKLLR AQTEREILSQ
201: LDHPFLPTLY SHFETDKFYC LVMEFCGGGN LYSLRQKQPN KCFTEDAARF FASEVLLALE YLHMLGIVYR DLKPENVLVR DDGHIMLSDF DLSLRCSVSP
301: TLVKSSSVHA AGGGSGSSRP VGLIDEDAAV QGCIQPSTFF PRILQSSKKN RKAKSDFGLF VNGSMPELMA EPTNVKSMSF VGTHEYLAPE IIRGEGHGSA
401: VDWWTFGIFI YELLYGATPF KGQGNRATLH NVIGQALRFP EVPHVSSAAR DLIKGLLVKE PQKRIAYKRG ATEIKQHPFF EGVNWALIRS ATPPHVPEPV
501: DFSCYASKDK ESMAAVDGGG KKNNNGAGGG CSTGGGDNKP NGDCNDPDYI DFEYF

Arabidopsis Description

AGC1-7Serine/threonine-protein kinase AGC1-7 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.