Factsheet for Os01t0233800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
vacuole 1
cytosol 2
plastid 3

Predictors

GFP

MS/MS

Papers

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0085g01140.t01	Wine grape	cytosol	59.96	72.34
PGSC0003DMT400025008	Potato	cytosol	60.15	71.11
EER99999	Sorghum	cytosol, plastid	69.74	68.96
Solyc12g017390.1.1	Tomato	cytosol	60.15	68.52
Zm00001d039282_P001	Maize	cytosol	63.91	68.0
TraesCS3A01G157100.1	Wheat	cytosol	74.81	66.89
TraesCS3D01G164700.1	Wheat	cytosol	75.0	66.17
TraesCS3B01G183500.2	Wheat	cytosol	74.62	65.95
HORVU3Hr1G031930.2	Barley	cytosol	74.62	65.84
GSMUA_Achr3P16430_001	Banana	cytosol	42.29	64.84
Os05t0237400-01	Rice	plasma membrane	61.47	56.97
Os12t0480200-01	Rice	cytosol	44.74	55.35
Os10t0562500-01	Rice	cytosol	44.17	55.16
AT3G12690.2	Thale cress	cytosol	58.65	54.07
CDY42166	Canola	cytosol, plastid	57.52	53.78
Bra034743.1-P	Field mustard	cytosol, plastid	57.71	53.77
CDY08414	Canola	cytosol, plastid	57.71	53.77
KRH44814	Soybean	cytosol	56.39	53.57
Bra038744.1-P	Field mustard	cytosol	57.33	53.32
CDY50542	Canola	cytosol	56.95	52.97
KRH13830	Soybean	cytosol	57.33	52.95
KRH43612	Soybean	cytosol	57.52	52.22
Os12t0149700-01	Rice	cytosol	31.2	49.11
Os09t0258500-01	Rice	cytosol, plasma membrane	50.75	47.62
Os08t0491200-01	Rice	cytosol	52.63	47.14
Os09t0478500-01	Rice	cytosol	50.94	46.48
Os06t0291600-01	Rice	nucleus	50.94	46.01
Os02t0725000-01	Rice	cytosol	50.19	45.41
Os11t0150700-00	Rice	cytosol, plastid	38.35	44.54
Os01t0174700-01	Rice	cytosol	39.47	42.6
Os03t0642300-00	Rice	plastid	35.53	41.0
Os12t0614600-01	Rice	cytosol	37.22	40.91
Os02t0654300-01	Rice	cytosol	50.94	39.28
Os04t0546300-01	Rice	cytosol	51.13	39.14
Os03t0253200-01	Rice	nucleus	31.58	33.07
Os04t0410200-00	Rice	cytosol	18.05	19.09
Os08t0491000-01	Rice	cytosol	13.35	17.53

Protein Annotations

MapMan:18.4.6.5	EntrezGene:4324289	EMBL:AK069983	ProteinID:BAF04427.1	ProteinID:BAS71199.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os01g0233800	EnsemblPlants:Os01t0233800-01	PFAM:PF00069	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF162	InterPro:Prot_kinase_dom	UniProt:Q0JPA1	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0000DD8A2C	RefSeq:XP_015649902.1	SEG:seg	:

Description

Similar to Viroid symptom modulation protein. (Os01t0233800-01)

Coordinates

chr1:+:7400509..7404310

Molecular Weight (calculated)

57908.7 Da

IEP (calculated)

9.361

GRAVY (calculated)

-0.347

Length

532 amino acids

Sequence
(BLAST)

001: MNSMSYNKLS ITNDRMDFNT RGNAVPNGKL DRNQSGVSAN RSSASKPTAR SKKKPDQADK TTPNPAQNSA SSATRSEAAT VTTTTKSPAI SVDRSSIARS
101: NSLDSFSYGQ AKRHTGGDSR WDAVRSASSV DCPLGLVHFR LLKRLGYGDI GSVYLVELRD TDAFFAMKVM DKESLISRNK LVRAQTEREI LGLLDHPFLP
201: TLYTHFETDK FYCLVMEYCS GGNLHSLRQR QLNKHFNEQA ARFYASEVLL ALEYLHMLGI VYRDLKPENV LVRDDGHIML SDFDLSLRCS VCPMLVKSSS
301: VHAGANGVVK GLAAGGGGDG EGVGVGCMQP SAFLPRILPK RSRKTSKSDL GLLHGSPLEF NAEPTDARSM SFVGTHEYLA PEIIRGEGHG SAVDWWTFGV
401: FLYELLHGMT PFKGSSNRAT LCNVVEQPLR FPDGGAFPAP AAASGVARDL IRGLLVKDPG KRIASRRGAT EIKQHPFFEG VNWALVRSAH PPSVPDPVDF
501: SQFGVREKPA AAPTKVAKPA ASDSSSGDFE YF

Best Arabidopsis Sequence Match ( AT1G79250.1 )
(BLAST)

001: MLTKPGKKLD SSESTHHTTS SNYPPLDIVH QTPQPRKEMQ QKPLFDPKKM DNLIKPEPAG FTNHHRPNPS PKIPSSPGSN MTESQSNLNT KPNNNNSNNN
101: SNMSSRSNSI ESTSSNPSKP HTGGDIRWDA VNTLTSKGVQ LGISDFRLLK RLGYGDIGSV YLVELRGTIT YFAMKVMDKA SLASRNKLLR AQTEREILSQ
201: LDHPFLPTLY SHFETDKFYC LVMEFCGGGN LYSLRQKQPN KCFTEDAARF FASEVLLALE YLHMLGIVYR DLKPENVLVR DDGHIMLSDF DLSLRCSVSP
301: TLVKSSSVHA AGGGSGSSRP VGLIDEDAAV QGCIQPSTFF PRILQSSKKN RKAKSDFGLF VNGSMPELMA EPTNVKSMSF VGTHEYLAPE IIRGEGHGSA
401: VDWWTFGIFI YELLYGATPF KGQGNRATLH NVIGQALRFP EVPHVSSAAR DLIKGLLVKE PQKRIAYKRG ATEIKQHPFF EGVNWALIRS ATPPHVPEPV
501: DFSCYASKDK ESMAAVDGGG KKNNNGAGGG CSTGGGDNKP NGDCNDPDYI DFEYF

Arabidopsis Description

AGC1-7Serine/threonine-protein kinase AGC1-7 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFB9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.