Factsheet for Os09t0258500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

nucleus 2
vacuole 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0872800-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47750.1	Os01t0872800-01	AT5G04510.1	16973627

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G170100.1	Wheat	cytosol	89.59	88.66
TraesCS5D01G174500.1	Wheat	cytosol	89.07	88.13
TraesCS5B01G166900.1	Wheat	cytosol	89.07	88.13
HORVU5Hr1G052250.1	Barley	cytosol	89.07	87.98
Zm00001d005135_P001	Maize	cytosol	84.3	83.57
Bra024918.1-P	Field mustard	cytosol	67.37	68.95
CDY17708	Canola	cytosol	67.37	68.95
Os09t0478500-01	Rice	cytosol	70.55	68.61
Os08t0491200-01	Rice	cytosol	71.25	68.01
CDX77795	Canola	cytosol	68.25	67.78
GSMUA_Achr1P09470_001	Banana	cytosol	55.73	67.38
KRH36626	Soybean	cytosol	72.13	67.27
AT5G47750.1	Thale cress	cytosol, plastid	69.49	67.24
VIT_10s0116g00440.t01	Wine grape	plastid	73.02	66.77
KRH11623	Soybean	cytosol	69.49	66.67
Solyc07g065710.2.1	Tomato	plastid	70.9	66.56
VIT_19s0015g00770.t01	Wine grape	extracellular	71.25	66.12
PGSC0003DMT400057021	Potato	plastid	70.37	66.06
PGSC0003DMT400022397	Potato	plastid	70.55	65.25
Solyc10g005770.2.1	Tomato	plastid	70.02	64.76
Os06t0291600-01	Rice	nucleus	67.02	64.52
Os02t0725000-01	Rice	cytosol	66.84	64.46
GSMUA_Achr8P25360_001	Banana	cytosol	58.38	63.17
Os10t0562500-01	Rice	cytosol	46.03	61.27
Os12t0480200-01	Rice	cytosol	45.86	60.47
Os01t0233800-01	Rice	plasma membrane	47.62	50.75
Os12t0149700-01	Rice	cytosol	29.81	50.0
Os04t0546300-01	Rice	cytosol	60.67	49.5
Os02t0654300-01	Rice	cytosol	58.38	47.97
Os05t0237400-01	Rice	plasma membrane	48.5	47.91
Os11t0150700-00	Rice	cytosol, plastid	37.39	46.29
Os01t0174700-01	Rice	cytosol	39.86	45.84
Os03t0642300-00	Rice	plastid	35.45	43.6
Os12t0614600-01	Rice	cytosol	36.51	42.77
Os03t0253200-01	Rice	nucleus	29.45	32.87
Os04t0410200-00	Rice	cytosol	18.69	21.07
Os08t0491000-01	Rice	cytosol	14.64	20.49

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.6.5	Gene3D:3.30.200.20	EntrezGene:4346539	ProteinID:BAD23437.1	ProteinID:BAD23751.1
ProteinID:BAF24614.1	ProteinID:BAT07093.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EnsemblPlantsGene:Os09g0258500
EnsemblPlants:Os09t0258500-01	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF89
InterPro:Prot_kinase_dom	UniProt:Q6K1W7	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00003B064E
RefSeq:XP_015612555.1	SEG:seg	:	:	:	:

Description

Similar to Protein kinase (EC 2.7.1.-) (Clone OSPK 2.1) (Fragment). (Os09t0258500-01)

Coordinates

chr9:-:4382994..4386627

Molecular Weight (calculated)

61835.6 Da

IEP (calculated)

8.019

GRAVY (calculated)

-0.313

Length

567 amino acids

Sequence
(BLAST)

001: MASKAVPDVV TDKKCDKTMA ASSEMSQSQE VISRGGKLGT ASSRETLLGD VATSSGVKEQ DKDSCSVDES VKLDGNEDAE KSSLRGSVKD SSASAKGSDR
101: ASSLTKVSGS TKVSDHAADI VGSSKSSVYR ASAGSDVSDE STCSSICSSA SKPHKSNDSR WEAIQMVRTK EGSLGLGHFR LLKRLGCGDI GSVYLSELSG
201: TKCYFAMKIM DKASLASRKK LLRAQTEREI LQCLDHPFLP TLYTHFETDK FSCLVMEFCP GGDLHTLRQK QPGKFFPEQA AKFYVAEVLL ALEYLHMLGI
301: IYRDLKPENV LVREDGHIML SDFDLSLRCA VSPTLLKSSN PGVDPNQKGN PSYCVQPVCI EPACIQPSCV TTTTCFAPRF FSSKSKKEKK AKTDIASQVR
401: PLPELVAEPT DARSMSFVGT HEYLAPEIIK GEGHGSAVDW WTFGIFLYEL LFGKTPFKGS GNRATLFNVV GQSLRFPESP VVSFAAKDLI RGLLIKEPQH
501: RLAYKRGATE IKQHPFFEGV NWALIRCATP PDIPKPVEIP RSVASTSQKA TTTAEKGSDN YLEFDFF

Best Arabidopsis Sequence Match ( AT5G47750.1 )
(BLAST)

001: MASTRKPSGH GAEVEAQKRS SSNSSTKSAK AETFEPMQLQ RSVTNPRAVG IPESKRLPES FRKRSSDPAV CKPDFSSLST VLEHVDSLTI DEKKTSGFGS
101: VKTSSASAKL SDGTSSLGKT SGSAKLSGRL DFMESGKSSI CRGSTSSDVS DESSCSSFSS TVNKPHKAND LRWEAIQAVR VRDGLLGLSH FRLLKRLGCG
201: DIGSVYLSEL SGTKCYFAMK VMDKTSLASR KKLLRAQTER EILQSLDHPF LPTLYTHFET EKFSCLVMEF CPGGDLHTLR QRQPGKHFSE QAVKFYIAES
301: LLALEYLHML GIVYRDLKPE NVLVREDGHI MLSDFDLSLR CLVSPTLVKS AAIESDPLRK NVYCVQPACI EPSCIQPSCT VPTTCFSPRL FSSKSKKDRK
401: PKNDTANQVR PLPELVAEPT DARSMSFVGT HEYLAPEIIK GEGHGSAVDW WTFGIFLYEL LFGRTPFKGS GNRQTLFNVV GQPLRFPETP VVSFAARDLI
501: RGLLMKEPQQ RLGFKRGATE VKQHPFFEGV NWALIRCATP PEIPKPVELE KGAVSVAEAP SSQKTAAGLV LNAQKGSDNY LEFDFF

Arabidopsis Description

D6PKL2Serine/threonine-protein kinase D6PKL2 [Source:UniProtKB/Swiss-Prot;Acc:Q39183]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.