Factsheet for VIT_19s0015g00770.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 4
vacuole 1
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

extracellular: 26106900

msms PMID: 26106900 doi

C Guillier, M Gamm, G Lucchi, C Truntzer, D Pecqueur, P Ducoroy, M Adrian, MC Héloir

Clinical Innovation Proteomic Platform - CLIPP, 15 Boulevard Maréchal de Lattre de Tassigny, BP37013, F-21070 Dijon cedex, France., CNRS, UMR1347 Agroécologie, ERL CNRS 6300, BP 86510, F-21000 Dijon, France;, Université de Bourgogne, UMR1347 Agroécologie, ERL CNRS 6300, BP 86510, F-21000 Dijon, France;

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P22450_001	Banana	cytosol	46.97	82.47
VIT_10s0116g00440.t01	Wine grape	plastid	81.83	80.65
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	40.59	78.73
Solyc07g065710.2.1	Tomato	plastid	76.92	77.81
PGSC0003DMT400057021	Potato	plastid	76.76	77.65
PGSC0003DMT400022397	Potato	plastid	76.6	76.35
Solyc10g005770.2.1	Tomato	plastid	75.94	75.69
GSMUA_Achr1P09470_001	Banana	cytosol	56.46	73.56
Os08t0491200-01	Rice	cytosol	70.05	72.05
GSMUA_Achr4P06290_001	Banana	cytosol	54.66	71.98
Os09t0478500-01	Rice	cytosol	68.58	71.87
Os09t0258500-01	Rice	cytosol, plasma membrane	66.12	71.25
TraesCS5A01G253500.1	Wheat	cytosol	66.78	70.71
TraesCS5D01G261300.1	Wheat	cytosol	66.61	70.54
TraesCS5B01G252500.1	Wheat	cytosol	66.45	70.36
HORVU5Hr1G071250.1	Barley	cytosol	66.45	70.36
TraesCS5D01G174500.1	Wheat	cytosol	65.96	70.33
TraesCS5A01G170100.1	Wheat	cytosol	65.96	70.33
HORVU5Hr1G052250.1	Barley	cytosol	65.96	70.21
KXG35854	Sorghum	cytosol	66.28	70.19
EES15458	Sorghum	cytosol	69.23	70.15
GSMUA_AchrUn_...	Banana	cytosol	56.79	70.1
Zm00001d005976_P008	Maize	cytosol	66.12	70.02
TraesCS5B01G166900.1	Wheat	cytosol	65.63	69.98
Zm00001d005135_P001	Maize	cytosol	65.47	69.93
TraesCS7D01G218000.1	Wheat	cytosol, plastid	66.12	69.9
TraesCS7A01G216200.1	Wheat	cytosol, plastid	66.12	69.9
TraesCS7B01G123400.1	Wheat	cytosol	66.12	69.9
Os06t0291600-01	Rice	nucleus	67.27	69.78
Zm00001d020858_P001	Maize	cytosol	65.79	69.67
HORVU7Hr1G043790.1	Barley	plastid	65.96	69.48
OQU85494	Sorghum	plastid	64.81	69.23
Os02t0725000-01	Rice	cytosol	66.45	69.05
GSMUA_Achr7P20130_001	Banana	nucleus	59.08	69.02
GSMUA_Achr8P25360_001	Banana	cytosol	59.08	68.89
GSMUA_Achr4P13100_001	Banana	cytosol	51.55	67.6
VIT_19s0085g01140.t01	Wine grape	cytosol	48.45	67.12
GSMUA_Achr5P04290_001	Banana	cytosol	54.66	67.07
KXG19822	Sorghum	cytosol, plastid	61.37	64.43
VIT_14s0066g02140.t01	Wine grape	cytosol	52.7	59.85
Zm00001d017889_P001	Maize	nucleus	36.99	57.51
VIT_14s0066g00460.t01	Wine grape	cytosol, plastid	62.03	55.9
VIT_13s0074g00730.t01	Wine grape	cytosol	30.77	54.34
VIT_06s0061g01560.t01	Wine grape	nucleus	37.97	51.56
VIT_15s0021g01540.t01	Wine grape	cytosol	59.41	50.98
VIT_11s0016g04910.t01	Wine grape	nucleus, plastid	38.95	50.64
VIT_10s0003g04320.t01	Wine grape	cytosol, plastid	33.39	45.23
VIT_19s0027g00020.t01	Wine grape	nucleus, plastid	32.57	41.98
VIT_06s0061g01540.t01	Wine grape	cytosol	51.06	35.49
VIT_08s0007g03600.t01	Wine grape	cytosol	49.75	35.19

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100258297	wikigene:100258297	MapMan:18.4.6.5	Gene3D:3.30.200.20	ProteinID:CCB62026
ProteinID:CCB62026.1	UniProt:F6I571	EMBL:FN596747	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EntrezGene:LOC100258297	wikigene:LOC100258297	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351
PANTHER:PTHR24351:SF112	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00019857F5
ArrayExpress:VIT_19s0015g00770	EnsemblPlantsGene:VIT_19s0015g00770	EnsemblPlants:VIT_19s0015g00770.t01	unigene:Vvi.1800	RefSeq:XP_002266700	RefSeq:XP_002266700.1
RefSeq:XP_010644601.1	RefSeq:XP_010644602.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr19:-:8904729..8910026

Molecular Weight (calculated)

66771.4 Da

IEP (calculated)

8.717

GRAVY (calculated)

-0.404

Length

611 amino acids

Sequence
(BLAST)

001: MASKSGARTS PDRQKRTFGS QTLEGNSRRP SPLQITKTSK SEPVTPKKTP RSVQPVALKQ VDVEASDDKN SLSSHQKGSA NSLTDKLGSS LSLGDSQQTP
101: TIVTPVASEV TGSLDGGADQ EKKTSEHGHS TVAAKVSDGT GSLAKTSGSA KISDRVEFVE SGKSSMCRGS TSSDVSDEST CSSLSSSISK PHKANDSRWE
201: AIQVVRAKDG ALGLNHFRLL KRLGCGDIGS VYLSELKGTK CYFAMKVMDK GSLASRKKLL RAQTEREILQ SLDHPFLPTL YTHFETEKFS CLVMEFCPGG
301: DLHTLRQRQP GKHFSEQAVK FYVAEVLLAL EYLHMLGIVY RDLKPENVLV REDGHIMLSD FDLSLRCTVS PTLVKSSSFD TEPLRRNPVY CVQPTCIEPS
401: CIQPSCVAPT TCFSPRLFSS KSKKDRKPKN EIGNQVSPLP ELIAEPTGAR SMSFVGTHEY LAPEIIKGEG HGSAVDWWTF GIFLYELLFG KTPFKGSGNR
501: ATLFNVVGQP LRFPESPVVS FSARDLIRGL LVKEPQHRLA YKRGATEIKQ HPFFEGVNWA LIRCASPPEI PKPVEIERVP APAASSSEKA AAAMAGPDQK
601: SCDNYLEFDF F

Best Arabidopsis Sequence Match ( AT5G47750.1 )
(BLAST)

001: MASTRKPSGH GAEVEAQKRS SSNSSTKSAK AETFEPMQLQ RSVTNPRAVG IPESKRLPES FRKRSSDPAV CKPDFSSLST VLEHVDSLTI DEKKTSGFGS
101: VKTSSASAKL SDGTSSLGKT SGSAKLSGRL DFMESGKSSI CRGSTSSDVS DESSCSSFSS TVNKPHKAND LRWEAIQAVR VRDGLLGLSH FRLLKRLGCG
201: DIGSVYLSEL SGTKCYFAMK VMDKTSLASR KKLLRAQTER EILQSLDHPF LPTLYTHFET EKFSCLVMEF CPGGDLHTLR QRQPGKHFSE QAVKFYIAES
301: LLALEYLHML GIVYRDLKPE NVLVREDGHI MLSDFDLSLR CLVSPTLVKS AAIESDPLRK NVYCVQPACI EPSCIQPSCT VPTTCFSPRL FSSKSKKDRK
401: PKNDTANQVR PLPELVAEPT DARSMSFVGT HEYLAPEIIK GEGHGSAVDW WTFGIFLYEL LFGRTPFKGS GNRQTLFNVV GQPLRFPETP VVSFAARDLI
501: RGLLMKEPQQ RLGFKRGATE VKQHPFFEGV NWALIRCATP PEIPKPVELE KGAVSVAEAP SSQKTAAGLV LNAQKGSDNY LEFDFF

Arabidopsis Description

D6PKL2Serine/threonine-protein kinase D6PKL2 [Source:UniProtKB/Swiss-Prot;Acc:Q39183]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.