Factsheet for VIT_10s0003g04320.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
vacuole 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_06s0009g01910.t01
VIT_08s0040g00470.t01
VIT_10s0003g04320.t01
VIT_11s0052g00440.t01
VIT_13s0074g00100.t01
VIT_17s0000g02420.t01
VIT_19s0014g04650.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34650.1	VIT_17s0000g02420.t01	AT1G73590.1	17889649
AT2G34650.1	VIT_10s0003g04320.t01	AT2G34650.1	12857841
AT2G34650.1	VIT_06s0009g01910.t01	AT2G41100.1	12857841
AT2G34650.1	VIT_08s0040g00470.t01	AT2G41100.1	12857841
AT2G34650.1	VIT_13s0074g00100.t01	AT5G04510.1	16601102
AT2G34650.1	VIT_19s0014g04650.t01	AT5G54490.1	12857841
AT2G34650.1	VIT_11s0052g00440.t01	AT5G57090.1	17889649

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21098	Soybean	cytosol, plastid	70.73	70.58
KRH59216	Soybean	cytosol	69.4	68.04
Bra005403.1-P	Field mustard	cytosol	65.19	66.97
CDX84294	Canola	cytosol, plastid	65.19	66.97
CDY17273	Canola	cytosol	65.19	66.97
CDY43662	Canola	cytosol	64.75	66.51
Bra021925.1-P	Field mustard	cytosol	64.52	66.29
AT2G34650.1	Thale cress	cytosol	64.3	66.21
GSMUA_Achr7P01120_001	Banana	nucleus	54.99	58.63
TraesCS5B01G377300.1	Wheat	plastid	51.44	54.08
Os12t0614600-01	Rice	cytosol	55.65	51.86
TraesCS5D01G044800.1	Wheat	plasma membrane	54.32	51.26
TraesCS5B01G037900.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	54.32	51.26
TraesCS5A01G037100.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	53.66	50.73
HORVU5Hr1G009390.1	Barley	cytosol, nucleus, plasma membrane	54.32	50.72
TraesCS5A01G375200.1	Wheat	plastid	51.44	50.66
Os03t0642300-00	Rice	plastid	51.22	50.11
Zm00001d031068_P001	Maize	plastid	53.66	49.29
OQU79615	Sorghum	cytosol, plastid	54.99	49.11
Zm00001d033234_P001	Maize	plastid	51.0	48.83
EER93759	Sorghum	plastid	51.22	48.33
VIT_13s0074g00730.t01	Wine grape	cytosol	36.81	47.98
GSMUA_Achr5P02480_001	Banana	nucleus	49.0	47.42
VIT_11s0016g04910.t01	Wine grape	nucleus, plastid	48.12	46.17
VIT_06s0061g01560.t01	Wine grape	nucleus	44.35	44.44
VIT_19s0085g01140.t01	Wine grape	cytosol	43.46	44.44
HORVU5Hr1G093040.2	Barley	plastid	51.66	44.21
VIT_19s0027g00020.t01	Wine grape	nucleus, plastid	40.35	38.4
VIT_14s0066g02140.t01	Wine grape	cytosol	43.46	36.43
VIT_19s0015g00770.t01	Wine grape	extracellular	45.23	33.39
VIT_10s0116g00440.t01	Wine grape	plastid	45.01	32.74
VIT_14s0066g00460.t01	Wine grape	cytosol, plastid	44.57	29.65
VIT_15s0021g01540.t01	Wine grape	cytosol	45.01	28.51
VIT_06s0061g01540.t01	Wine grape	cytosol	46.56	23.89
VIT_08s0007g03600.t01	Wine grape	cytosol	44.57	23.26

Protein Annotations

EntrezGene:100254888	wikigene:100254888	MapMan:11.2.4.1.2	MapMan:18.4.6.5	UniProt:A5C4C1	EMBL:AM481893
ProteinID:CAN62073	ProteinID:CAN62073.1	ProteinID:CCB55832	ProteinID:CCB55832.1	EMBL:FN595992	GO:GO:0000003
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009606	GO:GO:0009628
GO:GO:0009653	GO:GO:0009719	GO:GO:0009733	GO:GO:0009734	GO:GO:0009790	GO:GO:0009791
GO:GO:0009926	GO:GO:0009958	GO:GO:0009986	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043
GO:GO:0016049	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0030154	GO:GO:0035556
GO:GO:0040007	GO:GO:0048766	GO:GO:0048767	GO:GO:0048825	GO:GO:0048827	GO:GO:0080167
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100254888	wikigene:LOC100254888	PFAM:PF00069	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF177	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001521F56	ArrayExpress:VIT_10s0003g04320	EnsemblPlantsGene:VIT_10s0003g04320	EnsemblPlants:VIT_10s0003g04320.t01	unigene:Vvi.25252
RefSeq:XP_002274153	RefSeq:XP_002274153.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr10:-:7410409..7412705

Molecular Weight (calculated)

50299.7 Da

IEP (calculated)

8.988

GRAVY (calculated)

-0.399

Length

451 amino acids

Sequence
(BLAST)

001: MVESQRDSDG EVLNSSHSSM SSESCSSLRL SFSRLSFEHS PENLTLKPHR SSDSAYEAIR SAAFSRKSGL SFRDFKLVRR IGSGDIGTVY LCRLRSSSDD
101: DGCFYAMKVV DKETLAMKKK IQRAEMEKRI LKMLDHPFLP TLYAEFEASH FSGIVMEYCS GGDLHSLKHK QPQKRFSLSS ARFYAAEVLV ALEYLHMLGI
201: IYRDLKPENV LVRSDGHIML SDFDLSLCSN AIPAVESPDF SPDSPSPASP PNCRTPSPFS CLFRSRKVQT LSINRLFVAE PVSAKSCSFV GTHEYVSPEV
301: ASGRSHGNGV DWWALGIFIY EMVYGATPFA GATNEATLRN IVKKPLSFPT ETPASVSEMH ARDLMSGLLV KDPASRLGSK RGAADVKTHP FFKGLNFALV
401: RSLTPPEIPG LRRHKTPSFR PDSANSNKGR YHHQQQQQQQ QQQQSTAFDY F

Best Arabidopsis Sequence Match ( AT2G34650.1 )
(BLAST)

001: MLRESDGEMS LGTTNSPISS GTESCSSFSR LSFDAPPSTI PEEESFLSLK PHRSSDFAYA EIRRRKKQGL TFRDFRLMRR IGAGDIGTVY LCRLAGDEEE
101: SRSSYFAMKV VDKEALALKK KMHRAEMEKT ILKMLDHPFL PTLYAEFEAS HFSCIVMEYC SGGDLHSLRH RQPHRRFSLS SARFYAAEVL VALEYLHMLG
201: IIYRDLKPEN ILVRSDGHIM LSDFDLSLCS DSIAAVESSS SSPENQQLRS PRRFTRLARL FQRVLRSKKV QTLEPTRLFV AEPVTARSGS FVGTHEYVAP
301: EVASGGSHGN AVDWWAFGVF LYEMIYGKTP FVAPTNDVIL RNIVKRQLSF PTDSPATMFE LHARNLISGL LNKDPTKRLG SRRGAAEVKV HPFFKGLNFA
401: LIRTLTPPEI PSSVVKKPMK SATFSGRSSN KPAAFDYF

Arabidopsis Description

PIDPID [Source:UniProtKB/TrEMBL;Acc:A0A178VTE5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.