CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88769
EER88832
EER93759
EES01631
EES03961
EES09201
EES16322
KXG25648
KXG33526
OQU78227
OQU79615

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34650.1	EER93759	AT2G34650.1	12857841
AT2G34650.1	OQU79615	AT2G34650.1	12857841
AT2G34650.1	EES01631	AT2G41100.1	12857841
AT2G34650.1	EES09201	AT2G41100.1	12857841
AT2G34650.1	EES16322	AT2G41100.1	12857841
AT2G34650.1	OQU78227	AT2G41100.1	12857841
AT2G34650.1	EES03961	AT5G04510.1	16601102
AT2G34650.1	EER88832	AT5G54490.1	12857841
AT2G34650.1	KXG25648	AT5G54490.1	12857841
AT2G34650.1	KXG33526	AT5G54490.1	12857841
AT2G34650.1	EER88769	AT5G57090.1	17889649

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031068_P001	Maize	plastid	82.38	84.73
Os12t0614600-01	Rice	cytosol	71.68	74.79
TraesCS5D01G044800.1	Wheat	plasma membrane	70.3	74.27
TraesCS5A01G037100.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	69.31	73.38
TraesCS5B01G037900.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane	69.31	73.22
HORVU5Hr1G009390.1	Barley	cytosol, nucleus, plasma membrane	68.91	72.05
GSMUA_Achr7P01120_001	Banana	nucleus	54.26	64.78
EER93759	Sorghum	plastid	58.22	61.51
Bra021925.1-P	Field mustard	cytosol	48.12	55.35
CDY43662	Canola	cytosol	47.92	55.13
VIT_10s0003g04320.t01	Wine grape	cytosol, plastid	49.11	54.99
CDX84294	Canola	cytosol, plastid	47.52	54.67
CDY17273	Canola	cytosol	47.52	54.67
AT2G34650.1	Thale cress	cytosol	47.33	54.57
Bra005403.1-P	Field mustard	cytosol	47.33	54.44
KRH59216	Soybean	cytosol	49.31	54.13
KRH21098	Soybean	cytosol, plastid	47.72	53.32
GSMUA_Achr5P02480_001	Banana	nucleus	48.91	53.0
EES00213	Sorghum	cytosol, plastid	43.37	44.33
OQU77686	Sorghum	cytosol	41.19	36.88
OQU84819	Sorghum	cytosol	38.22	36.21
EER95166	Sorghum	nucleus	37.62	36.19
OQU85494	Sorghum	plastid	40.79	36.01
EES07987	Sorghum	nucleus, plastid	36.83	35.77
EER99999	Sorghum	cytosol, plastid	38.02	35.69
KXG35854	Sorghum	cytosol	40.4	35.36
EES15458	Sorghum	cytosol	40.59	34.0
KXG19822	Sorghum	cytosol, plastid	39.01	33.85
EER91921	Sorghum	cytosol	41.39	31.86
EES11209	Sorghum	cytosol	41.78	30.76
OQU81510	Sorghum	cytosol	40.59	25.34
EES17014	Sorghum	cytosol	39.21	25.06

Protein Annotations

MapMan:11.2.4.1.2	UniProt:A0A1Z5R840	GO:GO:0000003	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0048364	GO:GO:0048367	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
EnsemblPlants:OQU79615	ProteinID:OQU79615	ProteinID:OQU79615.1	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24351	PANTHER:PTHR24351:SF60	InterPro:Prot_kinase_dom	SMART:SM00220	EnsemblPlantsGene:SORBI_3008G170500	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000B8B9A9E	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:60472114..60473745

Molecular Weight (calculated)

53860.9 Da

IEP (calculated)

10.383

GRAVY (calculated)

-0.202

Length

505 amino acids

Sequence
(BLAST)

001: MLEVVVAPPP GPAAGEERLS DADTTASSTA APNSSLSSAS SAASLPRCSS LSRLSFDCSP SAALSLAASA APASSSSPAP ARPHRSGDAA WAAIRAASTS
101: AAAPLGPRDF RLLRRIGGGD IGTVYLCRLR ESEADAGRPC LFAMKVVDRR VVAKKKKLER AAAEKRILRV LDHPFLPTLF ADFDAAPHFS CVVVEFCPGG
201: DLHSLRHRMP NRRFPLASAR FYAAEVLLAL EYLHMMGIVY RDLKPENVLI RADGHIMLTD FDLSLQSTST PSLESSSASS SDDDSSTSVS CFPDHLFRFT
301: LRRRGGGSSS SRRALLRRAA SSARQPLVVA EPVEARSCSF VGTHEYVAPE VARGGPHGAA VDWWALGVFL YELLHGRTPF AGADNEATLR NIARRPLSFP
401: SPAVGGGSSG ADADARDLIE RLLAKDPRQR LGSRRGAADV KAHPFFRGLN FALLRSSRPP VVPGASRSPP LHRSQSCSAA TASATRRRAS KPPPQPQPDA
501: RFDLF

Best Arabidopsis Sequence Match ( AT2G34650.1 )
(BLAST)

001: MLRESDGEMS LGTTNSPISS GTESCSSFSR LSFDAPPSTI PEEESFLSLK PHRSSDFAYA EIRRRKKQGL TFRDFRLMRR IGAGDIGTVY LCRLAGDEEE
101: SRSSYFAMKV VDKEALALKK KMHRAEMEKT ILKMLDHPFL PTLYAEFEAS HFSCIVMEYC SGGDLHSLRH RQPHRRFSLS SARFYAAEVL VALEYLHMLG
201: IIYRDLKPEN ILVRSDGHIM LSDFDLSLCS DSIAAVESSS SSPENQQLRS PRRFTRLARL FQRVLRSKKV QTLEPTRLFV AEPVTARSGS FVGTHEYVAP
301: EVASGGSHGN AVDWWAFGVF LYEMIYGKTP FVAPTNDVIL RNIVKRQLSF PTDSPATMFE LHARNLISGL LNKDPTKRLG SRRGAAEVKV HPFFKGLNFA
401: LIRTLTPPEI PSSVVKKPMK SATFSGRSSN KPAAFDYF

Arabidopsis Description

PIDPID [Source:UniProtKB/TrEMBL;Acc:A0A178VTE5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.