CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
vacuole 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052523_P001	Maize	nucleus, plastid	82.12	83.4
Os11t0150700-00	Rice	cytosol, plastid	73.08	82.97
TraesCS5D01G137200.1	Wheat	plastid	73.46	81.8
TraesCS5B01G128400.1	Wheat	plastid	73.08	81.37
TraesCS5A01G129700.1	Wheat	plastid	74.42	81.3
GSMUA_Achr6P17280_001	Banana	cytosol, plastid	44.23	78.23
GSMUA_Achr10P...	Banana	cytosol, plastid	47.5	76.95
HORVU5Hr1G041960.1	Barley	plastid	72.69	71.73
VIT_13s0074g00730.t01	Wine grape	cytosol	43.27	65.03
Bra019427.1-P	Field mustard	cytosol, plastid	50.38	59.41
VIT_06s0061g01560.t01	Wine grape	nucleus	51.35	59.33
PGSC0003DMT400068252	Potato	nucleus	53.85	59.2
CDY08710	Canola	cytosol, plastid	50.19	59.18
Solyc11g067080.1.1	Tomato	nucleus	52.5	59.09
AT3G44610.1	Thale cress	cytosol, plastid	50.58	58.31
KRH26592	Soybean	nucleus	50.38	57.84
KRH30493	Soybean	cytosol, plastid	48.85	57.6
KRH25188	Soybean	nucleus, plastid	47.69	56.88
KRG92038	Soybean	cytosol	44.42	54.74
KRH34744	Soybean	cytosol	42.88	53.86
KRH22717	Soybean	nucleus	51.15	53.52
PGSC0003DMT400050201	Potato	cytosol	45.77	51.63
Solyc11g007250.1.1	Tomato	nucleus	44.81	50.76
EES00213	Sorghum	cytosol, plastid	39.42	41.5
EER93759	Sorghum	plastid	36.54	39.75
OQU84819	Sorghum	cytosol	40.0	39.02
EER99999	Sorghum	cytosol, plastid	39.42	38.1
OQU85494	Sorghum	plastid	41.54	37.76
OQU77686	Sorghum	cytosol	40.19	37.06
OQU79615	Sorghum	cytosol, plastid	35.77	36.83
KXG35854	Sorghum	cytosol	40.58	36.57
EES15458	Sorghum	cytosol	41.35	35.66
KXG19822	Sorghum	cytosol, plastid	39.23	35.05
EER91921	Sorghum	cytosol	40.58	32.16
EER95166	Sorghum	nucleus	31.73	31.43
EES11209	Sorghum	cytosol	41.35	31.34
EES17014	Sorghum	cytosol	40.19	26.46
OQU81510	Sorghum	cytosol	40.0	25.71

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	EntrezGene:8058535	UniProt:C5Y4M9	EnsemblPlants:EES07987
ProteinID:EES07987	ProteinID:EES07987.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24351	PANTHER:PTHR24351:SF104
InterPro:Prot_kinase_dom	SMART:SM00220	EnsemblPlantsGene:SORBI_3005G036500	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A8623F
RefSeq:XP_002448999.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:3314976..3320109

Molecular Weight (calculated)

55423.2 Da

IEP (calculated)

7.050

GRAVY (calculated)

-0.307

Length

520 amino acids

Sequence
(BLAST)

001: MPPDGDSAAA TGADIAADEL QSLSFGSSSD RSRSRSASTV STATASCSTS SSGPLHHHLS LPAPPSRRTP TSTTTSTTAL PTTQIPRLGA VSLSDIRFLR
101: RLGAGDIGSV YLAEVRPPTA GNKADTEKEK HPPTPPTPPM VVAAKVMDRK ELEGRNKEGR ARTEREILEA VDHPFLPRLY GVAEGDRWSC LLTEFCPGGD
201: LHVLRQRQPH RRFSESAVRF YAAEVVAAME YIHMMDIVYR DLKPENVLVR ADGHIMLTDF DLSLKCDPTA PTPAHVISDP LSFAARPATS TTSCAISSCI
301: VPAASCFHLF PGRRHRRRRW RAAKKPSSSS SNGGNSSGGN GGLELEFVAE PVELRSMSFV GTHEYLAPEI VSGEGHGSSV DWWTLGVFVF ELLYGVTPFK
401: GYDNEMTLAN IVARALEFPR DPAVSSAARD LVTALLAKDP ARRLGATVGA AAIKRHPFFG GVNWALLRCA TPPYVPPPFS VANNKAGGGG GGSNGKGGDG
501: GDDDGDVSED SCPGTPVEYY

Best Arabidopsis Sequence Match ( AT3G44610.1 )
(BLAST)

001: MEPWIDELTD DLQSVSFTSA GTTVNRSTSS GSRSSSSAAA LTPAPSAHGS FSSSKLPPSL RSSLSLSDLR FRLRLGSGDI GSVFLAEFKS LTAVTETTAV
101: KLPLLAAKVM DKKELASRSK EGRAKTEREI LESLDHPFLP TLYAAIDSPK WLCLLTEFCP GGDLHVLRQK QTHKRFHESA VRFYVSEVIV AIEYLHMLGI
201: VYRDLKPENV LVRSDGHIML TDFDLSLKCD ESTSTPQIVL NRNNLPNGSS DQNENQGMDH RQTTSSSCMI PNCIVPAVSC FHPRIRRRKK KTDHRNNGPE
301: LVAEPVDVRS MSFVGTHEYL APEIVSGEGH GSAVDWWTLG IFMFELFYGT TPFKGMDHEL TLANIVARAL EFPKEPTIPS AAKDLISQLL AKDPSRRLGS
401: SLGATAVKRH PFFQGVNWAL LMCTRPPFLP PPFRKELLSD DICPETHVDY Y

Arabidopsis Description

At3g44610 [Source:UniProtKB/TrEMBL;Acc:Q0V7S5]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.