CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
vacuole 1
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, vacuole
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88769
EER88832
EER93759
EES01631
EES03961
EES09201
EES16322
KXG25648
KXG33526
OQU78227
OQU79615

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G34650.1	EER93759	AT2G34650.1	12857841
AT2G34650.1	OQU79615	AT2G34650.1	12857841
AT2G34650.1	EES01631	AT2G41100.1	12857841
AT2G34650.1	EES09201	AT2G41100.1	12857841
AT2G34650.1	EES16322	AT2G41100.1	12857841
AT2G34650.1	OQU78227	AT2G41100.1	12857841
AT2G34650.1	EES03961	AT5G04510.1	16601102
AT2G34650.1	EER88832	AT5G54490.1	12857841
AT2G34650.1	KXG25648	AT5G54490.1	12857841
AT2G34650.1	KXG33526	AT5G54490.1	12857841
AT2G34650.1	EER88769	AT5G57090.1	17889649

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033234_P001	Maize	plastid	93.1	94.48
TraesCS5B01G377300.1	Wheat	plastid	72.18	80.42
TraesCS5A01G375200.1	Wheat	plastid	75.52	78.82
Os03t0642300-00	Rice	plastid	75.94	78.74
HORVU5Hr1G093040.2	Barley	plastid	75.73	68.69
GSMUA_Achr7P01120_001	Banana	nucleus	53.77	60.76
OQU79615	Sorghum	cytosol, plastid	61.51	58.22
GSMUA_Achr5P02480_001	Banana	nucleus	51.67	53.0
CDX84294	Canola	cytosol, plastid	48.33	52.62
AT2G34650.1	Thale cress	cytosol	48.12	52.51
Bra021925.1-P	Field mustard	cytosol	48.12	52.39
Bra005403.1-P	Field mustard	cytosol	47.91	52.16
CDY17273	Canola	cytosol	47.91	52.16
CDY43662	Canola	cytosol	47.91	52.16
KRH59216	Soybean	cytosol	49.37	51.3
VIT_10s0003g04320.t01	Wine grape	cytosol, plastid	48.33	51.22
KRH21098	Soybean	cytosol, plastid	48.12	50.88
EES00213	Sorghum	cytosol, plastid	45.4	43.93
OQU84819	Sorghum	cytosol	41.0	36.77
EES07987	Sorghum	nucleus, plastid	39.75	36.54
OQU85494	Sorghum	plastid	43.51	36.36
KXG35854	Sorghum	cytosol	42.89	35.53
EER95166	Sorghum	nucleus	38.91	35.43
EER99999	Sorghum	cytosol, plastid	39.54	35.13
OQU77686	Sorghum	cytosol	41.0	34.75
EES15458	Sorghum	cytosol	43.72	34.66
KXG19822	Sorghum	cytosol, plastid	41.84	34.36
EER91921	Sorghum	cytosol	42.47	30.95
EES11209	Sorghum	cytosol	42.68	29.74
OQU81510	Sorghum	cytosol	43.1	25.46
EES17014	Sorghum	cytosol	42.05	25.44

Protein Annotations

MapMan:11.2.4.1.2	EntrezGene:8057247	UniProt:C5WR79	EnsemblPlants:EER93759	ProteinID:EER93759	ProteinID:EER93759.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24351	PANTHER:PTHR24351:SF97	InterPro:Prot_kinase_dom	SMART:SM00220	EnsemblPlantsGene:SORBI_3001G156500	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI0001A82B76	RefSeq:XP_002466761.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:12656287..12658943

Molecular Weight (calculated)

51434.0 Da

IEP (calculated)

8.687

GRAVY (calculated)

-0.263

Length

478 amino acids

Sequence
(BLAST)

001: MAAPASSSTT ATAAPASSPP PKPPNNAASS TMLEPRQSPL PCPDAAASSV SSASCCSSSC SAGSSQADRS STFSVDSSSA ATPSSSPPRP HRASDVAWAP
101: IRGRALGPRD FTLLRRVGAG DIGTVYLCRL ESQAAEGSSA CEYAMKVVDR RALAKKGKLA RAAAEKRVLR RLDHPFLPTM FADFDAGTDY SCIVMEFCPG
201: GDLHSLRHRM PGRRFPLASA RFYAAEVLLA LEYLHMMGIV YRDLKPENVL IRGDGHIMLT DFDLSLESTA SPSLEDARNV GDNREEDVPE PAAPTCLPIP
301: ELQLLRLRRW KRRAAPRPRF VAEPVDARSS SFVGTHEYVA PEVARGGGHG AAVDWWAYGV FLYELIYGRT PFVGENNEAT LRNIVRRPLE FPAAATTTHA
401: HGVGDSAAAR DLIARLLDKD PRTRLGSKRG AADVKAHGFF KGLNFALLRS APPPVVPPPA ALHRCDKAAD VQQLFDHF

Best Arabidopsis Sequence Match ( AT2G34650.1 )
(BLAST)

001: MLRESDGEMS LGTTNSPISS GTESCSSFSR LSFDAPPSTI PEEESFLSLK PHRSSDFAYA EIRRRKKQGL TFRDFRLMRR IGAGDIGTVY LCRLAGDEEE
101: SRSSYFAMKV VDKEALALKK KMHRAEMEKT ILKMLDHPFL PTLYAEFEAS HFSCIVMEYC SGGDLHSLRH RQPHRRFSLS SARFYAAEVL VALEYLHMLG
201: IIYRDLKPEN ILVRSDGHIM LSDFDLSLCS DSIAAVESSS SSPENQQLRS PRRFTRLARL FQRVLRSKKV QTLEPTRLFV AEPVTARSGS FVGTHEYVAP
301: EVASGGSHGN AVDWWAFGVF LYEMIYGKTP FVAPTNDVIL RNIVKRQLSF PTDSPATMFE LHARNLISGL LNKDPTKRLG SRRGAAEVKV HPFFKGLNFA
401: LIRTLTPPEI PSSVVKKPMK SATFSGRSSN KPAAFDYF

Arabidopsis Description

PIDPID [Source:UniProtKB/TrEMBL;Acc:A0A178VTE5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.