CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER93759
EER95166
EES00213
EES15458
EES17014
KXG19822
KXG35854
OQU79615
OQU81510
OQU85494

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G04510.1	EER95166	AT1G53700.1	16973627
AT5G04510.1	EES00213	AT2G26700.1	16973627
AT5G04510.1	EER93759	AT2G34650.1	16601102
AT5G04510.1	OQU79615	AT2G34650.1	16601102
AT5G04510.1	EES17014	AT2G36350.1	16973627
AT5G04510.1	OQU81510	AT2G36350.1	16973627
AT5G04510.1	EER95166	AT3G14370.1	16973627
AT5G04510.1	EES15458	AT5G47750.1	16973627
AT5G04510.1	KXG19822	AT5G47750.1	16973627
AT5G04510.1	KXG35854	AT5G47750.1	16973627
AT5G04510.1	OQU85494	AT5G47750.1	16973627
AT5G04510.1	EES15458	AT5G47750.1	21798944
AT5G04510.1	KXG19822	AT5G47750.1	21798944
AT5G04510.1	KXG35854	AT5G47750.1	21798944
AT5G04510.1	OQU85494	AT5G47750.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042676_P001	Maize	cytosol	68.06	94.49
Os01t0872800-01	Rice	cytosol	87.7	88.75
TraesCS3A01G383400.1	Wheat	cytosol, plastid	86.9	86.56
TraesCS3D01G376500.1	Wheat	cytosol	86.9	86.39
TraesCS3B01G415800.1	Wheat	cytosol	85.71	85.88
HORVU3Hr1G082260.4	Barley	cytosol	86.31	81.61
GSMUA_Achr10P...	Banana	cytosol	75.2	75.8
GSMUA_Achr5P26030_001	Banana	cytosol	74.21	74.5
PGSC0003DMT400070360	Potato	cytosol	68.85	71.69
Solyc11g007760.1.1	Tomato	cytosol	69.44	70.85
PGSC0003DMT400043552	Potato	cytosol	67.06	70.56
Solyc03g071750.2.1	Tomato	cytosol	67.46	70.39
VIT_13s0074g00100.t01	Wine grape	cytosol	70.44	70.16
AT3G10540.1	Thale cress	cytosol	67.06	69.55
KRG92082	Soybean	cytosol	67.66	69.45
KRH34704	Soybean	cytosol	67.66	69.45
CDY08594	Canola	cytosol	66.07	69.23
Bra029850.1-P	Field mustard	cytosol	66.07	69.23
CDY00952	Canola	cytosol	65.87	68.74
CDY41359	Canola	cytosol	66.27	68.58
AT5G04510.1	Thale cress	cytosol	66.67	68.43
CDY68313	Canola	cytosol	62.5	68.18
Bra034125.1-P	Field mustard	cytosol	66.07	68.1
Bra009447.1-P	Field mustard	cytosol	66.07	67.96
CDX70218	Canola	cytosol	65.87	67.76
CDY44862	Canola	cytosol	65.67	67.69
EER97738	Sorghum	cytosol	22.42	23.25
KXG39433	Sorghum	cytosol	22.02	22.84
KXG21484	Sorghum	cytosol	24.6	22.71
EES18485	Sorghum	cytosol	24.6	22.3
EES00154	Sorghum	cytosol	24.21	22.22
KXG38339	Sorghum	cytosol	23.81	21.82
OQU79568	Sorghum	nucleus	23.61	20.7
EES16404	Sorghum	cytosol	26.39	12.15
OQU91111	Sorghum	cytosol, plastid	26.19	10.47

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:18.4.6.2	Gene3D:2.30.29.30	Gene3D:3.30.200.20	EntrezGene:8060994	UniProt:C5XRA6	EnsemblPlants:EES03961
ProteinID:EES03961	ProteinID:EES03961.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556
InterPro:IPR000719	InterPro:IPR011993	InterPro:Kinase-like_dom_sf	InterPro:PDK1-typ_PH	PFAM:PF00069	PFAM:PF14593
InterPro:PH-like_dom_sf	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24356	PANTHER:PTHR24356:SF163	InterPro:Prot_kinase_dom
SMART:SM00220	EnsemblPlantsGene:SORBI_3003G372200	SUPFAM:SSF50729	SUPFAM:SSF56112	unigene:Sbi.12010	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0001A852F3	RefSeq:XP_002458841.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:68762770..68769808

Molecular Weight (calculated)

55894.3 Da

IEP (calculated)

7.267

GRAVY (calculated)

-0.372

Length

504 amino acids

Sequence
(BLAST)

001: MAVGGDDDSM ERDFAARLRL AHSPSPASPA AAASSSPTAA GGIAFRAPQE QFTADDFVLG KIYGVGSYSK VVRATKKDTG RVYALKIMDK KFITKENKIS
101: YVKMERIVLD QLDHPGVIRL FFTFQDTYSL YMALESCEGG ELFDQIVRKG RLSEDDARFY AAEIVDILEY LHGVGLIHRD VKPENLLLTS DGHIKIADFG
201: SVKPTRDTPI KVLPNSTTER ACTFVGTAAY VPPEVLNSAP ATFGNDLWAL GCTLYQMLSG SSPFKDASEW LIFQRIIARD LKFPEYFSAE ARDLIDKLLD
301: VDPSKRPGAG PDGYSSLKAH PFFRGIDWKN LRKTRPPKLA FDANANEDED GQDSNWLAHM GTVAVNQQSN TVGNNGAPSS SEVRSHISKL SSIDSFDSKW
401: QEFLDPGESV VLISKLKKIN KLANKKVQLI LTDKPQLICV DPSKMVAKGN IIWSDDPSEL SVQVSDSSHF RICTPKKVST FEDAKQRAWQ WKKAIEDLQR
501: GQRN

Best Arabidopsis Sequence Match ( AT3G10540.1 )
(BLAST)

001: MLTMDKEFDS KLTLQGNSSS NGETISRSKS FAFKAPQENF TYHDFELGKI YGVGSYSKVV RAKKKDNGTV YALKIMDKKF ITKENKTAYV KLERIVLDQL
101: EHPGIVKLFF TFQDTQSLYM ALESCEGGEL FDQITRKGRL SEDEARFYSA EVVDALEYIH NMGLIHRDIK PENLLLTLDG HIKIADFGSV KPMQDSQITV
201: LPNAASDDKA CTFVGTAAYV PPEVLNSSPA TFGNDLWALG CTLYQMLSGT SPFKDASEWL IFQRIIARDI KFPNHFSEAA RDLIDRLLDT DPSRRPGAGS
301: EGYDSLKRHP FFKGVDWKNL RSQTPPKLAP DPASQSASPE RDGSPWNPTH VGDTSVLQND GHNGLSESSG SITRLASIDS FDSRWQQFLE PGESVLMISA
401: VKKLQKITSK KVQLILTNKP RLIYVDPSKL VVKGNIIWSD NSNDLNVQVS SPSHFKICTP KKVLSFEDAK QRALQWKKAI ETLQNR

Arabidopsis Description

PDPK23-phosphoinositide-dependent protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3C8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.