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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra029850.1-P Field mustard cytosol 100.0 100.0
CDY00952 Canola cytosol 98.75 98.34
CDY41359 Canola cytosol 92.93 91.79
CDY68313 Canola cytosol 87.53 91.13
AT3G10540.1 Thale cress cytosol 90.85 89.92
CDX70218 Canola cytosol 88.57 86.94
CDY44862 Canola cytosol 88.36 86.91
PGSC0003DMT400043552 Potato cytosol 79.83 80.17
Solyc03g071750.2.1 Tomato cytosol 80.25 79.92
KRG92082 Soybean cytosol 81.29 79.63
PGSC0003DMT400070360 Potato cytosol 79.83 79.34
KRH34704 Soybean cytosol 80.67 79.02
VIT_13s0074g00100.t01 Wine grape cytosol 81.91 77.87
Solyc11g007760.1.1 Tomato cytosol 79.83 77.73
GSMUA_Achr5P26030_001 Banana cytosol 71.73 68.73
GSMUA_Achr10P... Banana cytosol 70.89 68.2
Zm00001d042676_P001 Maize cytosol 51.35 68.04
Os01t0872800-01 Rice cytosol 69.65 67.27
EES03961 Sorghum cytosol 69.23 66.07
TraesCS3D01G376500.1 Wheat cytosol 68.4 64.89
TraesCS3A01G383400.1 Wheat cytosol, plastid 67.98 64.62
TraesCS3B01G415800.1 Wheat cytosol 67.57 64.61
HORVU3Hr1G082260.4 Barley cytosol 68.19 61.54
CDY58648 Canola cytosol 23.7 26.89
CDY69024 Canola cytosol 25.99 26.1
CDY67156 Canola cytosol 25.57 25.89
CDY36000 Canola cytosol 24.32 25.89
CDY22166 Canola cytosol 23.49 25.51
CDY27983 Canola cytosol 24.12 25.49
CDY27982 Canola cytosol, mitochondrion 24.32 25.43
CDY22167 Canola cytosol 24.12 25.22
CDY58649 Canola cytosol 23.91 25.11
CDY36001 Canola cytosol, mitochondrion 23.91 24.89
CDY03775 Canola cytosol 26.82 24.76
CDY46196 Canola cytosol 26.82 24.76
CDX68937 Canola cytosol 26.4 24.47
CDY56408 Canola cytosol 26.82 24.39
CDY49415 Canola cytosol 27.86 24.32
CDY12763 Canola cytosol 27.86 24.32
CDY65082 Canola cytosol 24.12 24.12
CDX75322 Canola endoplasmic reticulum 25.99 24.08
CDX77529 Canola cytosol 27.23 23.77
CDX85087 Canola cytosol 27.23 23.77
CDY67274 Canola cytosol 25.78 23.53
CDY09553 Canola cytosol, plastid 27.03 23.13
CDY02314 Canola cytosol 27.03 23.13
CDY67568 Canola cytosol 24.32 22.67
CDY65084 Canola cytosol 25.99 22.64
CDY30714 Canola cytosol 23.91 22.55
CDY31963 Canola cytosol 26.61 22.22
CDY70020 Canola cytosol 9.98 21.72
CDX90255 Canola cytosol 27.44 20.92
CDX89854 Canola cytosol 14.55 20.65
CDY09005 Canola cytosol 18.92 19.4
CDY12061 Canola cytosol 24.74 18.68
CDY41826 Canola cytosol 24.53 15.25
CDX93672 Canola cytosol, mitochondrion 23.91 12.37
CDY49673 Canola cytosol 23.49 11.47
CDY00276 Canola cytosol 26.4 11.35
CDX86906 Canola cytosol 26.4 11.35
CDY17064 Canola cytosol 24.74 11.26
CDY43221 Canola cytosol 24.74 11.25
CDY05763 Canola cytosol 26.4 10.97
CDY61286 Canola cytosol, plastid 25.36 9.93
CDX77308 Canola cytosol, plastid 24.95 9.9
CDX95815 Canola plastid 25.16 9.48
CDX92168 Canola plastid 24.95 9.35
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.6.2Gene3D:2.30.29.30Gene3D:3.30.200.20GO:A0A078F6C3UniProt:A0A078F6C3EnsemblPlants:CDY08594
ProteinID:CDY08594ProteinID:CDY08594.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00000385001InterPro:IPR000719InterPro:IPR011993InterPro:Kinase-like_dom_sfInterPro:PDK1-typ_PHPFAM:PF00069
PFAM:PF14593InterPro:PH-like_dom_sfPIRSF:PIRSF000654ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR24356
PANTHER:PTHR24356:SF163InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF50729SUPFAM:SSF56112InterPro:Ser/Thr_kinase_AS
UniParc:UPI0002547948SEG:seg::::
Description
BnaA05g28300DBnaA05g28300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6C3]
Coordinates
chrLK031986:-:840083..842539
Molecular Weight (calculated)
53630.7 Da
IEP (calculated)
8.766
GRAVY (calculated)
-0.454
Length
481 amino acids
Sequence
(BLAST)
001: MENEFDSKLS LQGNGEGSSI SRSKSFAFKA PQENFTIQDF ELDKIYGVGS YSKVVRATKK KDGGVYALKI MDKKFITKEN KTAYVKLERI VLDQLDHPGI
101: VKLFFTFQDN FSLYMALESC EGGELFDQIT RKGRLSEDEA RFYGAEVVDA LEYIHTMGLI HRDIKPENLL LTSDGHIKIA DFGSVKPMQD SQITLLPNAA
201: SDDKACTFVG TAAYVPPEVL NSSPATFGND LWALGCTLYQ MLSGTSPFKD ASEWLIFQRI IARDLKFPNH FSEAARDLID RLLDTDPSRR PGAGPEGYAS
301: LKRHPFFKGV DWKKPRSQTP PKLAPDPSSQ SASPERDGSP WNPTHVGDAS AMQNNGPSST SESSGSITRL ASIDSFDSRW QQFLEPGESV IMLSAVKKLR
401: KITSKKVQLI LTNKPRLIYV DPSKLVAKGN IIWSDNSSDL NVQISSPSHF KICTPKKVLS IEDSKQRALQ WRKAIETLQN R
Best Arabidopsis Sequence Match ( AT3G10540.1 )
(BLAST)
001: MLTMDKEFDS KLTLQGNSSS NGETISRSKS FAFKAPQENF TYHDFELGKI YGVGSYSKVV RAKKKDNGTV YALKIMDKKF ITKENKTAYV KLERIVLDQL
101: EHPGIVKLFF TFQDTQSLYM ALESCEGGEL FDQITRKGRL SEDEARFYSA EVVDALEYIH NMGLIHRDIK PENLLLTLDG HIKIADFGSV KPMQDSQITV
201: LPNAASDDKA CTFVGTAAYV PPEVLNSSPA TFGNDLWALG CTLYQMLSGT SPFKDASEWL IFQRIIARDI KFPNHFSEAA RDLIDRLLDT DPSRRPGAGS
301: EGYDSLKRHP FFKGVDWKNL RSQTPPKLAP DPASQSASPE RDGSPWNPTH VGDTSVLQND GHNGLSESSG SITRLASIDS FDSRWQQFLE PGESVLMISA
401: VKKLQKITSK KVQLILTNKP RLIYVDPSKL VVKGNIIWSD NSNDLNVQVS SPSHFKICTP KKVLSFEDAK QRALQWKKAI ETLQNR
Arabidopsis Description
PDPK23-phosphoinositide-dependent protein kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3C8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.