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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • nucleus 1
  • mitochondrion 2
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:plastid
MultiLoc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX73678
CDX92401
CDX95314
CDY06478
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G23310.1 CDX73678 AT3G51920.1 17360592
AT3G23310.1 CDX95314 AT3G51920.1 17360592
AT3G23310.1 CDY23174 AT3G51920.1 17360592
AT3G23310.1 CDY06478 AT4G14640.1 17360592
AT3G23310.1 CDX92401 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX85087 Canola cytosol 61.83 52.63
Bra014937.1-P Field mustard cytosol 61.62 52.45
CDX77529 Canola cytosol 61.62 52.45
CDX89854 Canola cytosol 35.82 49.56
CDY49415 Canola cytosol 58.21 49.55
CDY12763 Canola cytosol 58.21 49.55
AT3G23310.1 Thale cress cytosol 59.06 48.77
KRH34395 Soybean nucleus 55.22 47.61
KRH31692 Soybean cytosol 55.44 47.53
KRG92406 Soybean cytosol 54.8 47.33
Solyc09g090200.2.1 Tomato nucleus 54.16 46.44
VIT_05s0049g01220.t01 Wine grape cytosol 54.37 46.36
KRH69089 Soybean cytosol 55.01 46.15
CDY65082 Canola cytosol 46.27 45.11
CDX90255 Canola cytosol 56.08 41.68
CDY69024 Canola cytosol 41.36 40.5
CDY65084 Canola cytosol 46.27 39.31
CDX68937 Canola cytosol 42.86 38.73
CDY12061 Canola cytosol 52.03 38.3
CDY31963 Canola cytosol 46.91 38.19
CDX75322 Canola endoplasmic reticulum 42.22 38.15
CDY46196 Canola cytosol 42.22 38.0
CDY03775 Canola cytosol 42.0 37.81
CDY56408 Canola cytosol 42.43 37.62
CDY67156 Canola cytosol 36.89 36.42
CDY67274 Canola cytosol 40.51 36.05
CDY09553 Canola cytosol, plastid 43.07 35.94
CDY02314 Canola cytosol 43.07 35.94
CDY70020 Canola cytosol 12.37 26.24
CDY58648 Canola cytosol 20.68 22.88
CDY22166 Canola cytosol 20.47 21.67
CDY27983 Canola cytosol 20.68 21.32
CDY36000 Canola cytosol 20.47 21.24
CDY58649 Canola cytosol 20.68 21.18
CDY27982 Canola cytosol, mitochondrion 20.68 21.09
CDY22167 Canola cytosol 20.68 21.09
CDY36001 Canola cytosol, mitochondrion 20.68 21.0
CDY68313 Canola cytosol 18.98 19.26
CDY05763 Canola cytosol 47.33 19.17
CDY08594 Canola cytosol 19.4 18.92
CDY00952 Canola cytosol 19.4 18.84
CDY41359 Canola cytosol 18.98 18.28
CDY67568 Canola cytosol 20.04 18.22
CDX70218 Canola cytosol 18.98 18.16
CDY44862 Canola cytosol 18.55 17.79
CDY30714 Canola cytosol 19.19 17.65
CDY41826 Canola cytosol 21.75 13.18
CDX93672 Canola cytosol, mitochondrion 23.03 11.61
CDY49673 Canola cytosol 23.45 11.17
CDY17064 Canola cytosol 24.73 10.97
CDY43221 Canola cytosol 24.52 10.87
CDX86906 Canola cytosol 25.8 10.81
CDY00276 Canola cytosol 25.37 10.63
CDX77308 Canola cytosol, plastid 23.67 9.16
CDY61286 Canola cytosol, plastid 23.45 8.96
CDX95815 Canola plastid 23.24 8.54
CDX92168 Canola plastid 23.24 8.5
Protein Annotations
Gene3D:1.10.510.10Gene3D:3.30.200.20MapMan:50.2.7GO:A0A078F3A0UniProt:A0A078F3A0InterPro:AGC-kinase_C
EnsemblPlants:CDY09005ProteinID:CDY09005ProteinID:CDY09005.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00001114001InterPro:IPR000719InterPro:IPR000961InterPro:Kinase-like_dom_sfPFAM:PF00069
ScanProsite:PS00108PFscan:PS50011PFscan:PS51285PANTHER:PTHR24356PANTHER:PTHR24356:SF312InterPro:Prot_kinase_dom
SMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI0004EE4A3ESEG:seg:
Description
BnaC01g30860DBnaC01g30860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F3A0]
Coordinates
chrLK031991:+:490722..498359
Molecular Weight (calculated)
54076.8 Da
IEP (calculated)
8.792
GRAVY (calculated)
-0.682
Length
469 amino acids
Sequence
(BLAST)
001: MHMGEWIKQW KYARYQLSHL ISDADHELSH LHRFGFQALL SSESRILGIP RIESEVEDVV SKLVKFTEQS KAMKEMFAST SSVFRTNNNL RRRLQNEQQP
101: NEHDVVAAAD ADAAAEGCGN QTNRAIEREA MDIAKAWLNK IKSKGKEKSS KKKKATTRIN VKKEGSKTAE EAVSNATKQK AAAAKQFIEN HYKKQLQSQQ
201: QRHERRRKLS TCGVRGIKMG TDDFEPLTMI GKGAFGEGEG TGHVYAMKKL KKSEMLRRGQ VEHVKAERNL LAEVDSNCIV KLYCSFQDEE YMYLIMEYLP
301: GGDMMTLLMK MRLENPTEAK FYVGETVLAV ESIHKHNYIH RDIKPDNLLL DRSGHMKLSD FGLCKPLDCS VLEEKDFTYA QNIVTWRNYL KFPEEVRLSP
401: EEAKDLICRL LCNVEQRLGT KRAYEIKDHP WFVGVEWGKL YQMKAGFIPQ VNDELDTQNF EKFDEVNYK
Best Arabidopsis Sequence Match ( AT3G23310.1 )
(BLAST)
001: MDTARAWLKK LKSKGKEKSS NKKETSRGNV KEGSKTAGGE EAVSNVTKQK AAAAKQYIEN HYKKQVQSQQ QRKERRDMLE NKLAAAEVSE EEQKNLLKDL
101: EKKETEYMRR QRHKMGTDDF EPLTMIGKGA FGEVRICREK TTGNVYAMKK LKKSEMLRRG QVEHVKAERN LLAEVDSNCI VKLYCSFQDE EYLYLIMEYL
201: PGGDMMTLLM RKDTLTEDEA RFYVGETVLA IESIHKHNYI HRDIKPDNLL LDRSGHMKLS DFGLCKPLDC SILQEKDFVV AHNLSGALQS DGRPVAPRRT
301: RSQMEQLQNW QRNRRMLAYS TVGTPDYIAP EVLLKKGYGM ECDWWSLGAI MYEMLVGFPP FYSDEPMTTC RKIVNWKNYL KFPDEVRLSP EAKDLICRLL
401: CNVEQRIGTK GANEIKEHPW FSGVEWEKLY QMKAAFIPQV NDELDTQNFE KFEETDKQVP KTPKSGPWRK MLSSKDINFV GYTYKNVEIV NHDQLPGIAE
501: LKKKSTKPKR PSIKSLFEDE SASSTTSHQG SFMKLLPTQI EVPEKEDKSS SSSETLSSST TRFDNATS
Arabidopsis Description
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LW66]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.