CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	plastid
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23310.1	KRG89812	AT2G41090.1	17360592
AT3G23310.1	KRG94975	AT2G41090.1	17360592
AT3G23310.1	KRH18664	AT2G41090.1	17360592
AT3G23310.1	KRH31638	AT4G14640.1	17360592
AT3G23310.1	KRH69070	AT4G14640.1	17360592
AT3G23310.1	KRG89812	AT5G21274.1	17360592
AT3G23310.1	KRG94975	AT5G21274.1	17360592
AT3G23310.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH31692	Soybean	cytosol	87.12	89.03
KRH34395	Soybean	nucleus	79.61	81.8
KRG92406	Soybean	cytosol	79.43	81.77
VIT_05s0049g01220.t01	Wine grape	cytosol	79.07	80.36
Solyc09g090200.2.1	Tomato	nucleus	76.03	77.7
CDY12763	Canola	cytosol	75.67	76.77
AT4G14350.4	Thale cress	cytosol	75.31	76.41
CDY49415	Canola	cytosol	75.13	76.22
Bra010763.1-P	Field mustard	cytosol	74.96	76.18
CDX85087	Canola	cytosol	73.35	74.41
Bra014937.1-P	Field mustard	cytosol	73.17	74.23
CDX77529	Canola	cytosol	73.17	74.23
AT3G23310.1	Thale cress	cytosol	74.42	73.24
KRH19581	Soybean	cytosol	71.02	71.53
KRH32204	Soybean	cytosol	71.2	71.33
KRH67416	Soybean	cytosol	68.87	71.03
KRG95692	Soybean	cytosol	69.05	70.7
CDX90255	Canola	cytosol	74.96	66.4
KRH52224	Soybean	cytosol	56.71	63.02
KRH61550	Soybean	cytosol	56.53	62.82
CDY12061	Canola	cytosol	71.2	62.48
KRH12439	Soybean	cytosol	57.42	61.85
KRH05680	Soybean	cytosol	54.74	58.29
KRH15363	Soybean	cytosol	53.67	57.36
KRH37438	Soybean	cytosol	57.07	56.66
CDY09005	Canola	cytosol	46.15	55.01
Bra033489.1-P	Field mustard	nucleus	72.99	40.36
KRH56989	Soybean	cytosol	16.99	35.45
KRH03389	Soybean	plastid	23.79	32.05
KRH16956	Soybean	cytosol, plastid	23.61	27.97
KRH40713	Soybean	cytosol	23.79	27.77
KRH00425	Soybean	cytosol	23.79	27.77
KRG92082	Soybean	cytosol	23.97	27.29
KRH34704	Soybean	cytosol	23.61	26.88
KRH40003	Soybean	cytosol, plastid	32.2	15.19
KRH23792	Soybean	cytosol	26.12	14.46
KRH48660	Soybean	cytosol, plastid	32.02	13.8
KRH39042	Soybean	cytosol, plastid	32.02	13.75

Protein Annotations

EntrezGene:100789649	MapMan:18.4.6.4	EMBL:ACUP02000688	InterPro:AGC-kinase_C	ncoils:Coil	EnsemblPlantsGene:GLYMA_02G003200
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538
GO:GO:0035556	UniProt:I1JB62	InterPro:IPR000719	InterPro:IPR000961	EnsemblPlants:KRH69089	ProteinID:KRH69089
ProteinID:KRH69089.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF00433	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS51285	PANTHER:PTHR24356	PANTHER:PTHR24356:SF312	InterPro:Pkinase_C	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00133	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI00023BED5E	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:356326..371544

Molecular Weight (calculated)

65262.7 Da

IEP (calculated)

7.028

GRAVY (calculated)

-0.523

Length

559 amino acids

Sequence
(BLAST)

001: METTRRWFSK FKSNDKMNSA KDKETTGMTK EGSKPPTSEE APSNVTKQRV EAAKQYIENH YKKQMQSLQE RKERRNMLEK KLADAEVSEE EQHNLLQHLE
101: KKEREIMRLQ RHKMGADDFE PLTMIGKGAF GEVRICREKA TGHVYAMKKL KKSEMLRRGQ VEHVKAERNL LAEVDSNCIV KLYCSFQDEE FLYLIMEYLP
201: GGDMMTLLMR KDILTEDEAR FYVGETVLAI ESIHKHNYIH RDIKPDNLLL DRNGHMKLSD FGLCKPLDCS NLQEKDFSVG INRSGALQSD GRPAAPNRTQ
301: QEQLQHWQKN RRMLAYSTVG TPDYIAPEVL LKKGYGVECD WWSLGAIMYE MLVGYPPFYS DEPMLTCRKI VTWRTTLKFP EEAKLSAEAK DLICRLLCNV
401: EQRLGTKGAD EIKAHPWFKG VEWDKLYQMQ AAFIPEVNDE LDTQNFEKFE EGDKQTVPSS KAGPWRKMLP SKDINFVGYT YKNFEIVNDH EIPGIGTYIS
501: LCIYIYIYHN CYIECFHLFF IIFFPEQKYS CLTYIFIVYL KILLIIECNT MFYSLANLI

Best Arabidopsis Sequence Match ( AT3G23310.1 )
(BLAST)

001: MDTARAWLKK LKSKGKEKSS NKKETSRGNV KEGSKTAGGE EAVSNVTKQK AAAAKQYIEN HYKKQVQSQQ QRKERRDMLE NKLAAAEVSE EEQKNLLKDL
101: EKKETEYMRR QRHKMGTDDF EPLTMIGKGA FGEVRICREK TTGNVYAMKK LKKSEMLRRG QVEHVKAERN LLAEVDSNCI VKLYCSFQDE EYLYLIMEYL
201: PGGDMMTLLM RKDTLTEDEA RFYVGETVLA IESIHKHNYI HRDIKPDNLL LDRSGHMKLS DFGLCKPLDC SILQEKDFVV AHNLSGALQS DGRPVAPRRT
301: RSQMEQLQNW QRNRRMLAYS TVGTPDYIAP EVLLKKGYGM ECDWWSLGAI MYEMLVGFPP FYSDEPMTTC RKIVNWKNYL KFPDEVRLSP EAKDLICRLL
401: CNVEQRIGTK GANEIKEHPW FSGVEWEKLY QMKAAFIPQV NDELDTQNFE KFEETDKQVP KTPKSGPWRK MLSSKDINFV GYTYKNVEIV NHDQLPGIAE
501: LKKKSTKPKR PSIKSLFEDE SASSTTSHQG SFMKLLPTQI EVPEKEDKSS SSSETLSSST TRFDNATS

Arabidopsis Description

AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LW66]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.