CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23310.1	KRG89812	AT2G41090.1	17360592
AT3G23310.1	KRG94975	AT2G41090.1	17360592
AT3G23310.1	KRH18664	AT2G41090.1	17360592
AT3G23310.1	KRH31638	AT4G14640.1	17360592
AT3G23310.1	KRH69070	AT4G14640.1	17360592
AT3G23310.1	KRG89812	AT5G21274.1	17360592
AT3G23310.1	KRG94975	AT5G21274.1	17360592
AT3G23310.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34395	Soybean	nucleus	96.87	96.69
KRH31692	Soybean	cytosol	90.42	89.76
VIT_05s0049g01220.t01	Wine grape	cytosol	86.0	84.91
CDY12763	Canola	cytosol	82.87	81.67
CDY49415	Canola	cytosol	82.32	81.13
Bra010763.1-P	Field mustard	cytosol	82.14	81.09
AT4G14350.4	Thale cress	cytosol	81.95	80.76
CDX85087	Canola	cytosol	81.58	80.4
CDX77529	Canola	cytosol	81.4	80.22
Bra014937.1-P	Field mustard	cytosol	81.4	80.22
KRH69089	Soybean	cytosol	81.77	79.43
Solyc09g090200.2.1	Tomato	nucleus	79.93	79.34
AT3G23310.1	Thale cress	cytosol	82.5	78.87
KRH32204	Soybean	cytosol	79.56	77.42
KRH19581	Soybean	cytosol	79.01	77.3
KRH67416	Soybean	cytosol	74.4	74.54
KRG95692	Soybean	cytosol	74.77	74.36
CDX90255	Canola	cytosol	81.95	70.52
CDY12061	Canola	cytosol	78.45	66.88
KRH52224	Soybean	cytosol	60.04	64.81
KRH61550	Soybean	cytosol	59.85	64.61
KRH12439	Soybean	cytosol	58.93	61.66
KRH05680	Soybean	cytosol	57.83	59.81
KRH15363	Soybean	cytosol	57.27	59.46
KRH37438	Soybean	cytosol	58.75	56.66
CDY09005	Canola	cytosol	47.33	54.8
Bra033489.1-P	Field mustard	nucleus	77.35	41.54
KRH56989	Soybean	cytosol	17.31	35.07
KRH03389	Soybean	plastid	24.49	32.05
KRH40713	Soybean	cytosol	25.05	28.39
KRH00425	Soybean	cytosol	25.05	28.39
KRH34704	Soybean	cytosol	25.41	28.11
KRG92082	Soybean	cytosol	25.41	28.11
KRH16956	Soybean	cytosol, plastid	24.13	27.75
KRH40003	Soybean	cytosol, plastid	33.89	15.53
KRH23792	Soybean	cytosol	26.89	14.46
KRH48660	Soybean	cytosol, plastid	33.33	13.96
KRH39042	Soybean	cytosol, plastid	33.15	13.82

Protein Annotations

EntrezGene:100805439	MapMan:18.4.6.4	EMBL:ACUP02012753	InterPro:AGC-kinase_C	ncoils:Coil	EnsemblPlantsGene:GLYMA_20G208900
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	UniProt:I1NI89
InterPro:IPR000719	InterPro:IPR000961	EnsemblPlants:KRG92406	ProteinID:KRG92406	ProteinID:KRG92406.1	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFAM:PF00433	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51285
PANTHER:PTHR24356	PANTHER:PTHR24356:SF208	InterPro:Pkinase_C	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00133
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233DBFB	:	:

Description

hypothetical protein

Coordinates

chr20:-:44512395..44519534

Molecular Weight (calculated)

62962.3 Da

IEP (calculated)

8.471

GRAVY (calculated)

-0.825

Length

543 amino acids

Sequence
(BLAST)

001: MDRCWFNKFK PKDKTPSSKN KETGIAKGSK PPTNDEAPSN VTKQKVAAAK QYIENHYKKQ MQDLQERKER RNMLEKKLAD AEVSEEEQNN LLKYFEKKER
101: EYMRLKRHKM GADDFEPLTM IGKGAFGEVR VCREKATGHV YAMKKLKKSE MLRRGQVEHV KAERNLLAEV DSNCIVKLYY SFQDEEYLYL IMEYLPGGDM
201: MTLLMRKDIL TENEARFYVG ETVLAIESIH KHNYIHRDIK PDNLLLDRNG HMKLSDFGLC KPLDCSNLQE KDFSIGSNRS GALQSDGRPV APKRSQQEQL
301: QHWQKNRRML AYSTVGTPDY IAPEVLLKKG YGMECDWWSL GAIMYEMLVG YPPFYSDEPM LTCRKIVNWR NYLKFPEEVK ISAEAKDLIS RLLCNVDQRL
401: GTKGADEIKA HPWFKGIEWD KLYQIKAAFI PEVNDELDTQ NFEKFEEADN QTQPSSKSGP WRKMLSSKDV NFVGYTYKNY EIVNDDQLPE IAELKKKSTK
501: PKRPSIKTLF DDESATAANQ PTQGSFLKLL PTQPEVPEKS ESQ

Best Arabidopsis Sequence Match ( AT3G23310.1 )
(BLAST)

001: MDTARAWLKK LKSKGKEKSS NKKETSRGNV KEGSKTAGGE EAVSNVTKQK AAAAKQYIEN HYKKQVQSQQ QRKERRDMLE NKLAAAEVSE EEQKNLLKDL
101: EKKETEYMRR QRHKMGTDDF EPLTMIGKGA FGEVRICREK TTGNVYAMKK LKKSEMLRRG QVEHVKAERN LLAEVDSNCI VKLYCSFQDE EYLYLIMEYL
201: PGGDMMTLLM RKDTLTEDEA RFYVGETVLA IESIHKHNYI HRDIKPDNLL LDRSGHMKLS DFGLCKPLDC SILQEKDFVV AHNLSGALQS DGRPVAPRRT
301: RSQMEQLQNW QRNRRMLAYS TVGTPDYIAP EVLLKKGYGM ECDWWSLGAI MYEMLVGFPP FYSDEPMTTC RKIVNWKNYL KFPDEVRLSP EAKDLICRLL
401: CNVEQRIGTK GANEIKEHPW FSGVEWEKLY QMKAAFIPQV NDELDTQNFE KFEETDKQVP KTPKSGPWRK MLSSKDINFV GYTYKNVEIV NHDQLPGIAE
501: LKKKSTKPKR PSIKSLFEDE SASSTTSHQG SFMKLLPTQI EVPEKEDKSS SSSETLSSST TRFDNATS

Arabidopsis Description

AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LW66]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.