CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23310.1	KRG89812	AT2G41090.1	17360592
AT3G23310.1	KRG94975	AT2G41090.1	17360592
AT3G23310.1	KRH18664	AT2G41090.1	17360592
AT3G23310.1	KRH31638	AT4G14640.1	17360592
AT3G23310.1	KRH69070	AT4G14640.1	17360592
AT3G23310.1	KRG89812	AT5G21274.1	17360592
AT3G23310.1	KRG94975	AT5G21274.1	17360592
AT3G23310.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92406	Soybean	cytosol	89.76	90.42
KRH34395	Soybean	nucleus	89.21	89.71
KRH69089	Soybean	cytosol	89.03	87.12
VIT_05s0049g01220.t01	Wine grape	cytosol	86.47	86.0
CDY12763	Canola	cytosol	83.73	83.12
CDY49415	Canola	cytosol	83.18	82.58
Bra010763.1-P	Field mustard	cytosol	82.82	82.36
AT4G14350.4	Thale cress	cytosol	82.82	82.21
Solyc09g090200.2.1	Tomato	nucleus	81.9	81.9
CDX85087	Canola	cytosol	81.54	80.94
Bra014937.1-P	Field mustard	cytosol	81.35	80.76
CDX77529	Canola	cytosol	81.35	80.76
AT3G23310.1	Thale cress	cytosol	82.27	79.23
KRH32204	Soybean	cytosol	78.25	76.7
KRH19581	Soybean	cytosol	77.7	76.58
KRH67416	Soybean	cytosol	74.41	75.09
KRG95692	Soybean	cytosol	74.22	74.36
CDX90255	Canola	cytosol	82.63	71.63
CDY12061	Canola	cytosol	78.98	67.82
KRH52224	Soybean	cytosol	58.87	64.02
KRH61550	Soybean	cytosol	58.68	63.82
KRH12439	Soybean	cytosol	59.78	63.01
KRH05680	Soybean	cytosol	57.4	59.81
KRH15363	Soybean	cytosol	56.49	59.08
KRH37438	Soybean	cytosol	59.23	57.55
CDY09005	Canola	cytosol	47.53	55.44
Bra033489.1-P	Field mustard	nucleus	78.25	42.33
KRH56989	Soybean	cytosol	17.55	35.82
KRH03389	Soybean	plastid	24.5	32.29
KRH40713	Soybean	cytosol	24.68	28.18
KRH00425	Soybean	cytosol	24.68	28.18
KRH16956	Soybean	cytosol, plastid	24.31	28.18
KRG92082	Soybean	cytosol	25.23	28.11
KRH34704	Soybean	cytosol	24.86	27.7
KRH40003	Soybean	cytosol, plastid	32.91	15.19
KRH23792	Soybean	cytosol	26.51	14.36
KRH48660	Soybean	cytosol, plastid	32.72	13.8
KRH39042	Soybean	cytosol, plastid	32.54	13.67

Protein Annotations

EntrezGene:100795087	MapMan:18.4.6.4	EMBL:ACUP02006076	InterPro:AGC-kinase_C	ncoils:Coil	EnsemblPlantsGene:GLYMA_10G005600
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719
InterPro:IPR000961	UniProt:K7LGQ9	ProteinID:KRH31691.1	EnsemblPlants:KRH31692	ProteinID:KRH31692	ProteinID:KRH31692.1
InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF00433	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51285	PANTHER:PTHR24356	PANTHER:PTHR24356:SF208	InterPro:Pkinase_C	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00133	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233C905	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:560190..573484

Molecular Weight (calculated)

63357.1 Da

IEP (calculated)

8.134

GRAVY (calculated)

-0.775

Length

547 amino acids

Sequence
(BLAST)

001: METTRRWFSK FKSNDKMKSE KNKETTGVTK EGSRPPTNEE APSNVTKQRV EAAKQYIENH YKKQMQSLQE RKERRNMLEK KLADAEVSEE EQHNLLQHLE
101: KKEREIMRLQ RHKMGADDFE PLTMIGKGAF GEVRICREKA TGHVYAMKKL KKSEMLRRGQ VEHVKAERNL LAEVDSNCIV KLYCSFQDEE YLYLIMEYLP
201: GGDMMTLLMR KDILTEDEAR FYVGETVLAI ESIHKHNYIH RDIKPDNLLL DRNGHMKLSD FGLCKPLDCS NLQEKDFSVG MNRSGALQSD GRPVAPKRTQ
301: QEQLQHWQKN RRMLAYSTVG TPDYIAPEVL LKKGYGVECD WWSLGAIMYE MLVGYPPFYS DEPMLTCRKI VNWRTTLKFP EEAKLSAEAK DLICRLLCNV
401: EQRLGTKGAD EIKAHPWFKG VEWDKLYQMK AAFIPEVNDE LDTQNFEKFE EADKQTVPSS KAGPWRKMLP SKDINFVGYT YKNFEIVNDP EIPGIAELKK
501: KSTKPKRPSI KSLFDDESAT AANQPVRGSF LNLLPPQMEV PEKSESQ

Best Arabidopsis Sequence Match ( AT4G14350.3 )
(BLAST)

001: METAKAWLSK LKSKDKVKSS KKKEATSNVK EGPKTAGGEE ALSNITKEKA AAAKLYIENH YKMQMQSLQE RKERRKMLEK KLAAAEVSEE EQNNLLKDLE
101: MKETEYMRRQ RHKMGADDFE PLTMIGKGAF GEVRICREKG TGNVYAMKKL KKSEMLRRGQ VEHVKAERNL LAEVDSNCIV KLYCSFQDEE YLYLIMEYLP
201: GGDMMTLLMR KDTLTEDEAR FYIGETVLAI ESIHKHNYIH RDIKPDNLLL DKDGHMKLSD FGLCKPLDCS NLQEKDFTVA RNVSGALQSD GRPVATRRTQ
301: QEQLLNWQRN RRMLAYSTVG TPDYIAPEVL LKKGYGMECD WWSLGAIMYE MLVGFPPFYS DDPMTTCRKI VNWRNYLKFP DEVRLSPEAK DLICRLLCNV
401: EQRLGTKGAD EIKGHPWFRG TEWGKLYQMK AAFIPQVNDE LDTQNFEKFE ETDKQVPKSA KSGPWRKMLS SKDINFVGYT YKNVEIVNDD QIPGIAELKK
501: KSNKPKRPSI KSLFEDETSG GTTTHQGSFL NLLPTQIEDP EKEAFCFL

Arabidopsis Description

AGC (CAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q8L7S7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.