CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23310.1	KRG89812	AT2G41090.1	17360592
AT3G23310.1	KRG94975	AT2G41090.1	17360592
AT3G23310.1	KRH18664	AT2G41090.1	17360592
AT3G23310.1	KRH31638	AT4G14640.1	17360592
AT3G23310.1	KRH69070	AT4G14640.1	17360592
AT3G23310.1	KRG89812	AT5G21274.1	17360592
AT3G23310.1	KRG94975	AT5G21274.1	17360592
AT3G23310.1	KRH18664	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92406	Soybean	cytosol	96.69	96.87
KRH31692	Soybean	cytosol	89.71	89.21
VIT_05s0049g01220.t01	Wine grape	cytosol	85.66	84.73
CDY12763	Canola	cytosol	82.72	81.67
CDY49415	Canola	cytosol	82.17	81.13
AT4G14350.4	Thale cress	cytosol	81.99	80.94
CDX85087	Canola	cytosol	81.99	80.94
Bra010763.1-P	Field mustard	cytosol	81.8	80.91
CDX77529	Canola	cytosol	81.8	80.76
Bra014937.1-P	Field mustard	cytosol	81.8	80.76
Solyc09g090200.2.1	Tomato	nucleus	80.88	80.44
KRH69089	Soybean	cytosol	81.8	79.61
AT3G23310.1	Thale cress	cytosol	82.72	79.23
KRH32204	Soybean	cytosol	80.15	78.14
KRH19581	Soybean	cytosol	79.6	78.02
KRG95692	Soybean	cytosol	75.74	75.46
KRH67416	Soybean	cytosol	74.45	74.72
CDX90255	Canola	cytosol	81.62	70.36
CDY12061	Canola	cytosol	78.31	66.88
KRH52224	Soybean	cytosol	59.74	64.61
KRH61550	Soybean	cytosol	59.56	64.41
KRH12439	Soybean	cytosol	59.01	61.85
KRH05680	Soybean	cytosol	57.35	59.43
KRH15363	Soybean	cytosol	56.8	59.08
KRH37438	Soybean	cytosol	58.82	56.84
CDY09005	Canola	cytosol	47.61	55.22
Bra033489.1-P	Field mustard	nucleus	77.39	41.64
KRH56989	Soybean	cytosol	17.65	35.82
KRH03389	Soybean	plastid	24.63	32.29
KRH40713	Soybean	cytosol	25.0	28.39
KRH00425	Soybean	cytosol	25.0	28.39
KRH16956	Soybean	cytosol, plastid	24.26	27.97
KRG92082	Soybean	cytosol	25.18	27.9
KRH34704	Soybean	cytosol	24.82	27.49
KRH40003	Soybean	cytosol, plastid	33.46	15.36
KRH23792	Soybean	cytosol	26.47	14.26
KRH48660	Soybean	cytosol, plastid	33.27	13.96
KRH39042	Soybean	cytosol, plastid	33.09	13.82

Protein Annotations

EntrezGene:100783095	MapMan:18.4.6.4	EMBL:ACUP02006596	InterPro:AGC-kinase_C	ncoils:Coil	EnsemblPlantsGene:GLYMA_10G181500
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0006468
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0018105	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719
InterPro:IPR000961	UniProt:K7LK50	ProteinID:KRH34394.1	EnsemblPlants:KRH34395	ProteinID:KRH34395	ProteinID:KRH34395.1
ProteinID:KRH34396.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PFAM:PF00433	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PFscan:PS51285	PANTHER:PTHR24356	PANTHER:PTHR24356:SF208	InterPro:Pkinase_C	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00133	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000233D375

Description

hypothetical protein

Coordinates

chr10:+:41493985..41503072

Molecular Weight (calculated)

63191.6 Da

IEP (calculated)

8.116

GRAVY (calculated)

-0.814

Length

544 amino acids

Sequence
(BLAST)

001: MDRCWFNKFK PKDKTQSSKN KETKGIAKEG SKPLTNEEAP SNVTKQKVAA AKQYIENHYK KQMKDLEERQ ERRNMLEKKL ADAEVSEEEQ NNLLKYFEKK
101: EREYMRLKRH KMGADDFEPL TMIGKGAFGE VRVCREKTTG HVYAMKKLKK SEMLRRGQVE HVKAERNLLA EVDSNCIVKL YCSFQDEEYL YLIMEYLPGG
201: DMMTLLMRKD ILTEDEARFY VGETVLAIES IHKHNYIHRD IKPDNLLLDR NGHMKLSDFG LCKPLDCSNL QEKDFSIGSN RSGALQSDGR PVAPKRSQQE
301: QLQHWQKNRR MLAYSTVGTP DYIAPEVLLK KGYGMECDWW SLGAIMYEML VGYPPFYSDE PMLTCRKIVN WRSYLKFPEE VKLSAEAKDL ISRLLCNVDQ
401: RLGTKGADEI KAHPWFKGIE WDKLYQMKAA FIPEVNDELD TQNFEKFEEV DNQTQPSSKS GPWRKMLSSK DVNFVGYTYK NYEIVNDDQL PEIAELKKST
501: KPKRPSIKTL FYDESATTAN QPAQGSFLKL LPTQPEVPEK SESQ

Best Arabidopsis Sequence Match ( AT3G23310.1 )
(BLAST)

001: MDTARAWLKK LKSKGKEKSS NKKETSRGNV KEGSKTAGGE EAVSNVTKQK AAAAKQYIEN HYKKQVQSQQ QRKERRDMLE NKLAAAEVSE EEQKNLLKDL
101: EKKETEYMRR QRHKMGTDDF EPLTMIGKGA FGEVRICREK TTGNVYAMKK LKKSEMLRRG QVEHVKAERN LLAEVDSNCI VKLYCSFQDE EYLYLIMEYL
201: PGGDMMTLLM RKDTLTEDEA RFYVGETVLA IESIHKHNYI HRDIKPDNLL LDRSGHMKLS DFGLCKPLDC SILQEKDFVV AHNLSGALQS DGRPVAPRRT
301: RSQMEQLQNW QRNRRMLAYS TVGTPDYIAP EVLLKKGYGM ECDWWSLGAI MYEMLVGFPP FYSDEPMTTC RKIVNWKNYL KFPDEVRLSP EAKDLICRLL
401: CNVEQRIGTK GANEIKEHPW FSGVEWEKLY QMKAAFIPQV NDELDTQNFE KFEETDKQVP KTPKSGPWRK MLSSKDINFV GYTYKNVEIV NHDQLPGIAE
501: LKKKSTKPKR PSIKSLFEDE SASSTTSHQG SFMKLLPTQI EVPEKEDKSS SSSETLSSST TRFDNATS

Arabidopsis Description

AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LW66]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.