Factsheet for Solyc09g090200.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g008950.2.1
Solyc03g005240.1.1
Solyc06g053930.2.1
Solyc10g077010.1.1
Solyc10g081170.1.1
Solyc11g072240.1.1
Solyc12g099990.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G23310.1	Solyc01g008950.2.1	AT2G41090.1	17360592
AT3G23310.1	Solyc10g077010.1.1	AT2G41090.1	17360592
AT3G23310.1	Solyc10g081170.1.1	AT2G41090.1	17360592
AT3G23310.1	Solyc11g072240.1.1	AT2G41090.1	17360592
AT3G23310.1	Solyc12g099990.1.1	AT2G41090.1	17360592
AT3G23310.1	Solyc03g005240.1.1	AT4G14640.1	17360592
AT3G23310.1	Solyc06g053930.2.1	AT4G14640.1	17360592
AT3G23310.1	Solyc01g008950.2.1	AT5G21274.1	17360592
AT3G23310.1	Solyc10g077010.1.1	AT5G21274.1	17360592
AT3G23310.1	Solyc10g081170.1.1	AT5G21274.1	17360592
AT3G23310.1	Solyc11g072240.1.1	AT5G21274.1	17360592
AT3G23310.1	Solyc12g099990.1.1	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0049g01220.t01	Wine grape	cytosol	83.18	82.73
KRH31692	Soybean	cytosol	81.9	81.9
KRH34395	Soybean	nucleus	80.44	80.88
KRG92406	Soybean	cytosol	79.34	79.93
AT4G14350.4	Thale cress	cytosol	80.26	79.67
CDY12763	Canola	cytosol	79.71	79.13
CDY49415	Canola	cytosol	79.16	78.58
Bra010763.1-P	Field mustard	cytosol	78.98	78.55
CDX85087	Canola	cytosol	77.33	76.77
CDX77529	Canola	cytosol	77.33	76.77
Bra014937.1-P	Field mustard	cytosol	77.33	76.77
KRH69089	Soybean	cytosol	77.7	76.03
Solyc09g066460.2.1	Tomato	cytosol	73.86	75.09
AT3G23310.1	Thale cress	cytosol	77.88	75.0
Solyc06g008330.1.1	Tomato	cytosol	69.84	74.46
CDX90255	Canola	cytosol	78.79	68.3
CDY12061	Canola	cytosol	74.77	64.21
Solyc08g062670.2.1	Tomato	cytosol	58.68	61.73
Solyc12g088820.1.1	Tomato	cytosol	55.94	61.45
Solyc12g009010.1.1	Tomato	cytosol	55.39	59.53
Solyc04g078870.2.1	Tomato	cytosol	56.31	58.33
CDY09005	Canola	cytosol	46.44	54.16
Bra033489.1-P	Field mustard	nucleus	74.95	40.55
Solyc03g095510.2.1	Tomato	cytosol	24.68	29.16
Solyc10g074930.1.1	Tomato	cytosol, plastid	25.23	29.05
Solyc06g071210.2.1	Tomato	nucleus	24.5	28.76
Solyc03g071750.2.1	Tomato	cytosol	22.67	25.67
Solyc11g007760.1.1	Tomato	cytosol	22.49	24.9
Solyc03g083590.2.1	Tomato	cytosol	31.99	15.0
Solyc04g080170.2.1	Tomato	cytosol	29.62	14.96
Solyc03g118530.2.1	Tomato	cytosol, plastid	32.54	13.76
Solyc06g068920.2.1	Tomato	cytosol, plastid	30.9	13.21

Protein Annotations

MapMan:18.4.6.4	InterPro:AGC-kinase_C	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0018105
GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:IPR000961	UniProt:K4CW46	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PFAM:PF00433	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51285
PANTHER:PTHR24356	PANTHER:PTHR24356:SF312	InterPro:Pkinase_C	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00133
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:Solyc09g090200.2	EnsemblPlants:Solyc09g090200.2.1	UniParc:UPI000276CB68
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr9:+:69758340..69766379

Molecular Weight (calculated)

63078.7 Da

IEP (calculated)

8.319

GRAVY (calculated)

-0.772

Length

547 amino acids

Sequence
(BLAST)

001: MESAKRWFCK LGKKDKPKPP KKQETTSNGK EGSKLSPHEE APSTATKQKV AAAKQYIEKH YKEQMKSLQE RRERRNMLEK KLADAEVSEE EQSNLLKYLE
101: KKETEFMRIQ RHKMGADDFE PLTMIGKGAF GEVRICREKA TSHVYAMKKL KKSEMLRRGQ VEHVKAERNL LAEVESNCIV KLYCSFQDEE YLYLIMEYLP
201: GGDMMTLLMR KDTLTEDEAR FYVGETVLAI ESIHKHNYIH RDIKPDNLLL DKHGHMKLSD FGLCKPLDCS NLQEKDFTAA NKLSGALLSD GRPAPPRRTQ
301: QEQLLHWQKN RRMLAYSTVG TPDYIAPEVL LKKGYGCECD WWSLGAIMYE MLVGYPPFYS DEPMSTCRKI VNWRTHLKFP EEAKLSPEAK DLICKLLCNV
401: EQRLGTRGAD EIKAHPWFKG VEWDKLYQMK AAFIPEVNGE LDTQNFEKFE EGDNQIPTAA KSGPWRKMLS SKDVNFMGYT YKNFEIVNDN DVSQMAELKK
501: KSNKAKRPTV KSLFSEDSEA TDSQQAHGSF LNLLPPHLES SKQAEQL

Best Arabidopsis Sequence Match ( AT4G14350.4 )
(BLAST)

001: METAKAWLSK LKSKDKVKSS KKKEATSNVK EGPKTAGGEE ALSNITKEKA AAAKLYIENH YKMQMQSLQE RKERRKMLEK KLAAAEVSEE EQNNLLKDLE
101: MKETEYMRRQ RHKMGADDFE PLTMIGKGAF GEVRICREKG TGNVYAMKKL KKSEMLRRGQ VEHVKAERNL LAEVDSNCIV KLYCSFQDEE YLYLIMEYLP
201: GGDMMTLLMR KDTLTEDEAR FYIGETVLAI ESIHKHNYIH RDIKPDNLLL DKDGHMKLSD FGLCKPLDCS NLQEKDFTVA RNVSGALQSD GRPVATRRTQ
301: QEQLLNWQRN RRMLAYSTVG TPDYIAPEVL LKKGYGMECD WWSLGAIMYE MLVGFPPFYS DDPMTTCRKI VNWRNYLKFP DEVRLSPEAK DLICRLLCNV
401: EQRLGTKGAD EIKGHPWFRG TEWGKLYQMK AAFIPQVNDE LDTQNFEKFE ETDKQVPKSA KSGPWRKMLS SKDINFVGYT YKNVEIVNDD QIPGIAELKK
501: KSNKPKRPSI KSLFEDETSG GTTTHQGSFL NLLPTQIEDP EKEGSKSSSS G

Arabidopsis Description

AGC (CAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q8L7S7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.