Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
20496099
nucleus: 25464976 extracellular: 29876421 |
msms PMID:
20496099
doi
Institute for Plant Diseases and Plant Protection, Faculty of Natural Sciences, Leibniz Universität Hannover, Herrenhäuser Str.2, 30419 Hannover, Germany. dahal@ipp.uni-hannover.de
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_08s0040g00470.t01 | Wine grape | cytosol | 100.0 | 100.0 |
| AT3G56800.1 | Thale cress | cytosol | 99.33 | 99.33 |
| AT5G21274.1 | Thale cress | cytosol | 99.33 | 99.33 |
| Bra000214.1-P | Field mustard | cytosol | 99.33 | 99.33 |
| Bra002368.1-P | Field mustard | cytosol | 99.33 | 99.33 |
| Bra003251.1-P | Field mustard | cytosol | 99.33 | 99.33 |
| Bra006595.1-P | Field mustard | cytosol | 99.33 | 99.33 |
| Bra014671.1-P | Field mustard | cytosol | 99.33 | 99.33 |
| Bra020155.1-P | Field mustard | cytosol | 99.33 | 99.33 |
| Os01t0267900-01 | Rice | cytosol | 99.33 | 99.33 |
| Os03t0319300-01 | Rice | cytosol, extracellular, nucleus | 99.33 | 99.33 |
| Os07t0687200-02 | Rice | cytosol | 99.33 | 99.33 |
| Solyc10g077010.1.1 | Tomato | cytosol | 99.33 | 99.33 |
| Solyc11g072240.1.1 | Tomato | cytosol | 99.33 | 99.33 |
| Solyc12g099990.1.1 | Tomato | nucleus | 99.33 | 99.33 |
| Bra007269.1-P | Field mustard | cytosol | 98.66 | 98.66 |
| Bra012037.1-P | Field mustard | cytosol | 98.66 | 98.66 |
| Bra019453.1-P | Field mustard | cytosol | 98.66 | 98.66 |
| CDY04474 | Canola | cytosol | 98.66 | 98.66 |
| CDY56411 | Canola | cytosol | 98.66 | 98.66 |
| CDY65072 | Canola | cytosol | 98.66 | 98.66 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane | 98.66 | 98.66 |
| GSMUA_Achr3P09330_001 | Banana | cytosol | 98.66 | 98.66 |
| GSMUA_Achr5P07820_001 | Banana | cytosol | 98.66 | 98.66 |
| GSMUA_Achr6P23670_001 | Banana | cytosol | 98.66 | 98.66 |
| KRG94975 | Soybean | nucleus | 98.66 | 98.66 |
| Solyc01g008950.2.1 | Tomato | nucleus | 98.66 | 98.66 |
| CDX92401 | Canola | cytosol | 88.59 | 98.51 |
| GSMUA_Achr5P27590_001 | Banana | cytosol | 76.51 | 98.28 |
| GSMUA_Achr10P... | Banana | cytosol | 97.99 | 97.99 |
| GSMUA_Achr2P01120_001 | Banana | cytosol | 97.99 | 97.99 |
| GSMUA_Achr3P25040_001 | Banana | cytosol | 97.99 | 97.99 |
| GSMUA_Achr6P15990_001 | Banana | cytosol | 97.99 | 97.99 |
| GSMUA_Achr9P17280_001 | Banana | cytosol | 97.99 | 97.99 |
| Os01t0279300-01 | Rice | cytosol, plasma membrane, plastid | 97.99 | 97.99 |
| Os05t0491100-01 | Rice | cytosol, extracellular | 97.99 | 97.99 |
| Zm00001d008278_P001 | Maize | cytosol | 83.22 | 97.64 |
| CDY55678 | Canola | cytosol | 97.32 | 97.32 |
| Bra034981.1-P | Field mustard | cytosol | 94.63 | 97.24 |
| CDY12321 | Canola | cytosol | 94.63 | 97.24 |
| GSMUA_Achr11P... | Banana | cytosol | 66.44 | 97.06 |
| Bra004166.1-P | Field mustard | cytosol | 96.64 | 96.64 |
| CDX96148 | Canola | cytosol | 96.64 | 96.64 |
| Bra025438.1-P | Field mustard | cytosol | 73.15 | 96.46 |
| TraesCS1A01G308800.1 | Wheat | cytosol | 84.56 | 96.18 |
| CDY27651 | Canola | cytosol | 95.97 | 95.33 |
| CDX99690 | Canola | cytosol | 95.3 | 95.3 |
| Solyc03g098050.2.1 | Tomato | nucleus | 91.95 | 91.95 |
| AT2G41110.2 | Thale cress | cytosol | 99.33 | 91.93 |
| AT1G66410.2 | Thale cress | cytosol | 97.32 | 91.19 |
| TraesCS3A01G184500.1 | Wheat | cytosol | 98.66 | 89.63 |
| TraesCS3D01G188600.1 | Wheat | cytosol | 99.33 | 88.62 |
| Zm00001d038545_P001 | Maize | cytosol, mitochondrion | 86.58 | 86.58 |
| Zm00001d047597_P001 | Maize | cytosol | 84.56 | 85.71 |
| TraesCS2B01G113800.2 | Wheat | cytosol | 99.33 | 84.57 |
| TraesCS3B01G219900.1 | Wheat | cytosol | 97.32 | 83.33 |
| Bra034317.1-P | Field mustard | cytosol | 100.0 | 83.24 |
| CDY48191 | Canola | cytosol | 100.0 | 83.24 |
| AT5G37780.3 | Thale cress | cytosol | 97.32 | 82.86 |
| CDX77060 | Canola | cytosol | 100.0 | 82.78 |
| AT2G27030.3 | Thale cress | cytosol | 99.33 | 81.77 |
| CDX75970 | Canola | cytosol | 61.74 | 80.7 |
| TraesCS3A01G191900.1 | Wheat | cytosol | 83.22 | 77.99 |
| TraesCS3D01G194500.2 | Wheat | cytosol | 83.22 | 77.99 |
| Solyc06g053930.2.1 | Tomato | cytosol | 77.18 | 77.18 |
| Zm00001d038543_P004 | Maize | plastid | 86.58 | 76.33 |
| TraesCS3A01G335000.1 | Wheat | cytosol | 92.62 | 75.82 |
| TraesCS3D01G328300.1 | Wheat | cytosol | 92.62 | 75.82 |
| HORVU3Hr1G079210.4 | Barley | cytosol | 92.62 | 75.0 |
| HORVU3Hr1G038010.1 | Barley | cytosol, plastid | 99.33 | 74.37 |
| TraesCS3B01G365900.1 | Wheat | cytosol | 91.28 | 74.32 |
| CDY30947 | Canola | cytosol | 97.99 | 69.86 |
| EES01631 | Sorghum | cytosol | 85.91 | 69.57 |
| AT3G43810.2 | Thale cress | cytosol | 99.33 | 69.16 |
| HORVU2Hr1G016740.4 | Barley | cytosol | 99.33 | 68.84 |
| Os01t0810300-01 | Rice | plasma membrane | 84.56 | 67.38 |
| Zm00001d043144_P001 | Maize | plasma membrane | 82.55 | 67.21 |
| Zm00001d028948_P001 | Maize | cytosol | 87.92 | 66.5 |
| CDY57144 | Canola | cytosol | 65.1 | 66.44 |
| CDY21220 | Canola | cytosol | 97.32 | 65.61 |
| Solyc03g005240.1.1 | Tomato | cytosol | 67.11 | 65.36 |
| Solyc01g105630.2.1 | Tomato | cytosol | 63.76 | 64.63 |
| GSMUA_Achr10P... | Banana | cytosol | 79.19 | 62.43 |
| GSMUA_Achr10P... | Banana | cytosol | 78.52 | 62.23 |
| TraesCS5D01G068100.1 | Wheat | cytosol | 67.79 | 61.96 |
| Zm00001d041430_P001 | Maize | cytosol | 69.8 | 61.54 |
| TraesCS5A01G057100.1 | Wheat | cytosol | 67.79 | 61.21 |
| EES09201 | Sorghum | cytosol | 73.83 | 61.11 |
| TraesCS5B01G137100.1 | Wheat | cytosol | 73.83 | 61.11 |
| EES16322 | Sorghum | cytosol | 71.81 | 60.8 |
| TraesCS5A01G057200.1 | Wheat | cytosol | 66.44 | 60.74 |
| HORVU5Hr1G044710.4 | Barley | cytosol | 73.15 | 60.56 |
| TraesCS5A01G139700.1 | Wheat | cytosol | 73.15 | 60.56 |
| TraesCS5D01G153400.1 | Wheat | cytosol | 73.15 | 60.56 |
| Os12t0603800-00 | Rice | cytosol | 67.11 | 60.24 |
| TraesCS5D01G068000.1 | Wheat | cytosol | 67.79 | 60.12 |
| HORVU5Hr1G014070.2 | Barley | cytosol | 66.44 | 59.64 |
| TraesCS5B01G059900.1 | Wheat | cytosol | 67.11 | 59.52 |
| Zm00001d005003_P002 | Maize | cytosol | 71.14 | 58.89 |
| Zm00001d052415_P001 | Maize | cytosol | 62.42 | 58.86 |
| Solyc03g083520.2.1 | Tomato | cytosol, nucleus | 50.34 | 50.0 |
| AT2G41090.1 | Thale cress | cytosol | 63.09 | 49.21 |
| HORVU5Hr1G014060.1 | Barley | cytosol, plastid | 67.11 | 46.73 |
| Os05t0491000-01 | Rice | cytosol | 48.32 | 46.45 |
| Solyc11g072270.1.1 | Tomato | cytosol | 48.32 | 46.15 |
| Solyc03g097100.1.1 | Tomato | cytosol | 49.66 | 45.4 |
| TraesCS1D01G308000.1 | Wheat | cytosol | 45.64 | 45.33 |
| HORVU0Hr1G001280.1 | Barley | cytosol | 45.64 | 45.03 |
| TraesCS1A01G308700.1 | Wheat | cytosol | 45.64 | 44.74 |
| TraesCS1B01G319300.1 | Wheat | cytosol | 44.97 | 44.67 |
| TraesCS4B01G131100.1 | Wheat | cytosol | 67.11 | 43.29 |
| Zm00001d010649_P001 | Maize | extracellular | 40.94 | 42.96 |
| TraesCS4D01G126100.1 | Wheat | cytosol | 68.46 | 42.32 |
| HORVU4Hr1G026290.3 | Barley | cytosol, plastid | 62.42 | 42.08 |
| OQU78227 | Sorghum | cytosol | 48.32 | 40.22 |
| Solyc02g090810.2.1 | Tomato | cytosol, mitochondrion | 44.97 | 39.88 |
| Solyc04g026350.2.1 | Tomato | cytosol | 45.64 | 39.31 |
| Solyc01g010020.2.1 | Tomato | cytosol | 38.26 | 35.4 |
| Solyc03g114420.1.1 | Tomato | cytosol | 37.58 | 32.75 |
| GSMUA_Achr8P05790_001 | Banana | cytosol | 46.31 | 28.16 |
| AT2G41100.1 | Thale cress | cytosol | 59.73 | 27.47 |
Protein Annotations
| EnsemblPlants:Solyc10g081170.1.1 | EnsemblPlantsGene:Solyc10g081170.1 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 | PANTHER:PTHR23050:SF250 |
| PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI0000000547 |
| UniProt:K4D304 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr10:-:62302432..62303815
Molecular Weight (calculated)
16848.6 Da
IEP (calculated)
3.876
GRAVY (calculated)
-0.619
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMAK
001: MADQLTDDQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMANH VWECASKLIK KRKKKKKKKK KKKTKNAKRN EKELIQHNPS QPESHRVPSR
201: LNLLCHRSHS CSIL
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKVMMANH VWECASKLIK KRKKKKKKKK KKKTKNAKRN EKELIQHNPS QPESHRVPSR
201: LNLLCHRSHS CSIL
Arabidopsis Description
CAM7Calmodulin 7 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPJ2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.