Factsheet for AT2G41100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	20.68	65.69
GSMUA_Achr5P27590_001	Banana	cytosol	22.53	62.93
AT3G56800.1	Thale cress	cytosol	27.47	59.73
Bra000214.1-P	Field mustard	cytosol	27.47	59.73
Os01t0267900-01	Rice	cytosol	27.47	59.73
Os01t0279300-01	Rice	cytosol, plasma membrane, plastid	27.47	59.73
Os03t0319300-01	Rice	cytosol, extracellular, nucleus	27.47	59.73
Os05t0491100-01	Rice	cytosol, extracellular	27.47	59.73
Os07t0687200-02	Rice	cytosol	27.47	59.73
PGSC0003DMT400018569	Potato	cytosol	27.47	59.73
PGSC0003DMT400070437	Potato	cytosol	27.47	59.73
Solyc10g077010.1.1	Tomato	cytosol	27.47	59.73
Solyc10g081170.1.1	Tomato	extracellular	27.47	59.73
Solyc11g072240.1.1	Tomato	cytosol	27.47	59.73
Solyc12g099990.1.1	Tomato	nucleus	27.47	59.73
VIT_08s0040g00470.t01	Wine grape	cytosol	27.47	59.73
AT5G21274.1	Thale cress	cytosol	27.16	59.06
GSMUA_Achr10P...	Banana	cytosol, plasma membrane	27.16	59.06
GSMUA_Achr3P09330_001	Banana	cytosol	27.16	59.06
GSMUA_Achr5P07820_001	Banana	cytosol	27.16	59.06
GSMUA_Achr9P17280_001	Banana	cytosol	27.16	59.06
PGSC0003DMT400058435	Potato	cytosol	27.16	59.06
Solyc01g008950.2.1	Tomato	nucleus	27.16	59.06
GSMUA_Achr10P...	Banana	cytosol	26.85	58.39
GSMUA_Achr2P01120_001	Banana	cytosol	26.85	58.39
GSMUA_Achr6P15990_001	Banana	cytosol	26.85	58.39
GSMUA_Achr6P23670_001	Banana	cytosol	26.85	58.39
KRG94975	Soybean	nucleus	26.85	58.39
VIT_06s0009g01910.t01	Wine grape	cytosol	27.47	58.17
GSMUA_Achr3P25040_001	Banana	cytosol	26.54	57.72
Zm00001d008278_P001	Maize	cytosol	21.91	55.91
AT1G66410.2	Thale cress	cytosol	27.16	55.35
AT2G41110.2	Thale cress	cytosol	27.47	55.28
TraesCS1A01G308800.1	Wheat	cytosol	22.22	54.96
TraesCS3A01G184500.1	Wheat	cytosol	27.47	54.27
TraesCS3D01G188600.1	Wheat	cytosol	27.47	53.29
PGSC0003DMT400054299	Potato	cytosol	18.52	53.1
Zm00001d038545_P001	Maize	cytosol, mitochondrion	24.07	52.35
KRH18664	Soybean	cytosol	22.53	52.14
AT2G27030.3	Thale cress	cytosol	28.7	51.38
TraesCS2B01G113800.2	Wheat	cytosol	27.47	50.86
AT2G41090.1	Thale cress	cytosol	29.94	50.79
PGSC0003DMT400046278	Potato	cytosol	12.04	50.65
AT5G37780.3	Thale cress	cytosol	27.16	50.29
TraesCS3B01G219900.1	Wheat	cytosol	26.85	50.0
AT4G14640.1	Thale cress	cytosol	23.15	49.67
HORVU3Hr1G079210.4	Barley	cytosol	28.09	49.46
TraesCS3A01G335000.1	Wheat	cytosol	27.47	48.9
TraesCS3D01G328300.1	Wheat	cytosol	27.47	48.9
EES01631	Sorghum	cytosol	27.47	48.37
Zm00001d047597_P001	Maize	cytosol	21.91	48.3
PGSC0003DMT400014123	Potato	mitochondrion	17.9	47.54
Zm00001d043144_P001	Maize	plasma membrane	26.85	47.54
Os01t0810300-01	Rice	plasma membrane	27.16	47.06
TraesCS3B01G365900.1	Wheat	cytosol	26.54	46.99
TraesCS5B01G137100.1	Wheat	cytosol	25.93	46.67
EES09201	Sorghum	cytosol	25.62	46.11
HORVU5Hr1G044710.4	Barley	cytosol	25.62	46.11
TraesCS5A01G139700.1	Wheat	cytosol	25.62	46.11
TraesCS5D01G153400.1	Wheat	cytosol	25.62	46.11
KRG89812	Soybean	cytosol, mitochondrion	23.46	46.06
TraesCS3A01G191900.1	Wheat	cytosol	22.53	45.91
TraesCS3D01G194500.2	Wheat	cytosol	22.53	45.91
Zm00001d041430_P001	Maize	cytosol	23.77	45.56
EES16322	Sorghum	cytosol	24.69	45.45
HORVU2Hr1G016740.4	Barley	cytosol	29.94	45.12
AT3G22930.1	Thale cress	cytosol	24.07	45.09
Zm00001d005003_P002	Maize	cytosol	25.0	45.0
TraesCS5D01G068100.1	Wheat	cytosol	22.53	44.79
HORVU3Hr1G038010.1	Barley	cytosol, plastid	27.47	44.72
Os12t0603800-00	Rice	cytosol	22.84	44.58
Zm00001d038543_P004	Maize	plastid	23.15	44.38
TraesCS5A01G057100.1	Wheat	cytosol	22.53	44.24
HORVU5Hr1G014070.2	Barley	cytosol	22.53	43.98
PGSC0003DMT400097662	Potato	cytosol, mitochondrion	23.46	43.93
AT3G43810.2	Thale cress	cytosol	29.01	43.93
Zm00001d052415_P001	Maize	cytosol	21.3	43.67
TraesCS5A01G057200.1	Wheat	cytosol	21.91	43.56
TraesCS5B01G059900.1	Wheat	cytosol	22.53	43.45
TraesCS5D01G068000.1	Wheat	cytosol	22.53	43.45
GSMUA_Achr10P...	Banana	cytosol	24.07	41.49
GSMUA_Achr10P...	Banana	cytosol	24.07	41.27
AT3G03000.1	Thale cress	cytosol	20.37	40.0
AT1G12310.1	Thale cress	cytosol	18.21	39.86
Zm00001d028948_P001	Maize	cytosol	23.46	38.58
AT1G62820.1	Thale cress	cytosol	17.59	38.51
AT1G32250.1	Thale cress	cytosol	18.83	36.75
Os05t0491000-01	Rice	cytosol	17.28	36.13
AT3G25600.1	Thale cress	cytosol	17.28	34.78
TraesCS4B01G131100.1	Wheat	cytosol	24.38	34.2
HORVU5Hr1G014060.1	Barley	cytosol, plastid	22.53	34.11
AT1G18530.1	Thale cress	cytosol	16.36	33.76
TraesCS1D01G308000.1	Wheat	cytosol	15.43	33.33
TraesCS4D01G126100.1	Wheat	cytosol	24.69	33.2
HORVU0Hr1G001280.1	Barley	cytosol	15.43	33.11
TraesCS1A01G308700.1	Wheat	cytosol	15.43	32.89
TraesCS1B01G319300.1	Wheat	cytosol	15.12	32.67
AT4G37010.2	Thale cress	cytosol, mitochondrion	16.36	30.99
AT3G50360.1	Thale cress	cytosol	16.05	30.77
Zm00001d010649_P001	Maize	extracellular	13.27	30.28
HORVU4Hr1G026290.3	Barley	cytosol, plastid	19.44	28.51
OQU78227	Sorghum	cytosol	15.74	28.49
GSMUA_Achr8P05790_001	Banana	cytosol	15.12	20.0

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	EntrezGene:818709	ProteinID:AAC37419.1	ProteinID:AAD12001.1	ProteinID:AEC09928.1
ProteinID:AEC09931.1	EMBL:AF424577	ArrayExpress:AT2G41100	EnsemblPlantsGene:AT2G41100	RefSeq:AT2G41100	TAIR:AT2G41100
RefSeq:AT2G41100-TAIR-G	EnsemblPlants:AT2G41100.1	TAIR:AT2G41100.1	EMBL:AY120719	ProteinID:BAA08282.1	EMBL:BT000036
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0005774	GO:GO:0008150	GO:GO:0009506	GO:GO:0009605	GO:GO:0009606	GO:GO:0009612
GO:GO:0009628	GO:GO:0009646	GO:GO:0009652	GO:GO:0016020	GO:GO:0046872	InterPro:IPR002048
RefSeq:NP_001189723.1	RefSeq:NP_181643.1	UniProt:P25071	PFAM:PF13499	PO:PO:0000005	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0006504	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007131	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009001	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PO:PO:0025181	PO:PO:0025281	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR23050
PANTHER:PTHR23050:SF324	SMART:SM00054	SUPFAM:SSF47473	Symbol:TCH3	UniParc:UPI0000000D30	SEG:seg

Description

CML12Calmodulin-like protein 12 [Source:UniProtKB/Swiss-Prot;Acc:P25071]

Coordinates

chr2:+:17138065..17139617

Molecular Weight (calculated)

36809.3 Da

IEP (calculated)

4.626

GRAVY (calculated)

-0.762

Length

324 amino acids

Sequence
(BLAST)

001: MADKLTDDQI TEYRESFRLF DKNGDGSITK KELGTMMRSI GEKPTKADLQ DLMNEADLDG DGTIDFPEFL CVMAKNQGHD QAPRHTKKTM ADKLTDDQIT
101: EYRESFRLFD KNGDGSITKK ELRTVMFSLG KNRTKADLQD MMNEVDLDGD GTIDFPEFLY LMAKNQGHDQ APRHTKKTMV DYQLTDDQIL EFREAFRVFD
201: KNGDGYITVN ELRTTMRSLG ETQTKAELQD MINEADADGD GTISFSEFVC VMTGKMIDTQ SKKETYRVVN QGQGQVQRHT RNDRAGGTNW ERDIAVGVAS
301: NIIASPISDF MKDRFKDLFE ALLS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.