Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P23670_001 | Banana | cytosol | 99.33 | 99.33 |
| KRG94975 | Soybean | nucleus | 98.66 | 98.66 |
| GSMUA_Achr6P15990_001 | Banana | cytosol | 98.66 | 98.66 |
| GSMUA_Achr2P01120_001 | Banana | cytosol | 98.66 | 98.66 |
| GSMUA_Achr10P... | Banana | cytosol | 98.66 | 98.66 |
| GSMUA_Achr11P... | Banana | cytosol | 67.11 | 98.04 |
| VIT_08s0040g00470.t01 | Wine grape | cytosol | 97.99 | 97.99 |
| Solyc10g081170.1.1 | Tomato | extracellular | 97.99 | 97.99 |
| GSMUA_Achr5P07820_001 | Banana | cytosol | 97.99 | 97.99 |
| GSMUA_Achr3P09330_001 | Banana | cytosol | 97.99 | 97.99 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane | 97.99 | 97.99 |
| CDY55678 | Canola | cytosol | 97.99 | 97.99 |
| GSMUA_Achr5P27590_001 | Banana | cytosol | 75.84 | 97.41 |
| PGSC0003DMT400046278 | Potato | cytosol | 50.34 | 97.4 |
| Bra025438.1-P | Field mustard | cytosol | 73.83 | 97.35 |
| Solyc11g072240.1.1 | Tomato | cytosol | 97.32 | 97.32 |
| AT5G21274.1 | Thale cress | cytosol | 97.32 | 97.32 |
| AT3G56800.1 | Thale cress | cytosol | 97.32 | 97.32 |
| GSMUA_Achr9P17280_001 | Banana | cytosol | 97.32 | 97.32 |
| PGSC0003DMT400018569 | Potato | cytosol | 97.32 | 97.32 |
| Bra000214.1-P | Field mustard | cytosol | 97.32 | 97.32 |
| Bra002368.1-P | Field mustard | cytosol | 97.32 | 97.32 |
| PGSC0003DMT400070437 | Potato | cytosol | 97.32 | 97.32 |
| Bra003251.1-P | Field mustard | cytosol | 97.32 | 97.32 |
| Solyc10g077010.1.1 | Tomato | cytosol | 97.32 | 97.32 |
| CDX99690 | Canola | cytosol | 97.32 | 97.32 |
| Bra006595.1-P | Field mustard | cytosol | 97.32 | 97.32 |
| Bra014671.1-P | Field mustard | cytosol | 97.32 | 97.32 |
| Bra020155.1-P | Field mustard | cytosol | 97.32 | 97.32 |
| Solyc12g099990.1.1 | Tomato | nucleus | 97.32 | 97.32 |
| Bra004166.1-P | Field mustard | cytosol | 97.32 | 97.32 |
| CDX96148 | Canola | cytosol | 97.32 | 97.32 |
| CDY65072 | Canola | cytosol | 96.64 | 96.64 |
| Bra007269.1-P | Field mustard | cytosol | 96.64 | 96.64 |
| Bra012037.1-P | Field mustard | cytosol | 96.64 | 96.64 |
| Bra019453.1-P | Field mustard | cytosol | 96.64 | 96.64 |
| PGSC0003DMT400058435 | Potato | cytosol | 96.64 | 96.64 |
| CDY56411 | Canola | cytosol | 96.64 | 96.64 |
| Solyc01g008950.2.1 | Tomato | nucleus | 96.64 | 96.64 |
| CDY04474 | Canola | cytosol | 96.64 | 96.64 |
| CDX92401 | Canola | cytosol | 86.58 | 96.27 |
| CDY27651 | Canola | cytosol | 96.64 | 96.0 |
| PGSC0003DMT400054299 | Potato | cytosol | 72.48 | 95.58 |
| VIT_06s0009g01910.t01 | Wine grape | cytosol | 97.99 | 95.42 |
| Bra034981.1-P | Field mustard | cytosol | 92.62 | 95.17 |
| CDY12321 | Canola | cytosol | 92.62 | 95.17 |
| AT1G66410.2 | Thale cress | cytosol | 97.99 | 91.82 |
| AT2G41110.2 | Thale cress | cytosol | 97.32 | 90.06 |
| KRH18664 | Soybean | cytosol | 83.89 | 89.29 |
| PGSC0003DMT400014123 | Potato | mitochondrion | 69.8 | 85.25 |
| AT5G37780.3 | Thale cress | cytosol | 97.99 | 83.43 |
| CDX75970 | Canola | cytosol | 62.42 | 81.58 |
| Bra034317.1-P | Field mustard | cytosol | 97.99 | 81.56 |
| CDY48191 | Canola | cytosol | 97.99 | 81.56 |
| CDX77060 | Canola | cytosol | 97.99 | 81.11 |
| AT2G27030.3 | Thale cress | cytosol | 97.32 | 80.11 |
| GSMUA_Achr4P22570_001 | Banana | cytosol | 77.85 | 78.38 |
| GSMUA_Achr7P01390_001 | Banana | cytosol | 76.51 | 77.03 |
| GSMUA_Achr2P12680_001 | Banana | cytosol | 75.17 | 75.68 |
| KRG89812 | Soybean | cytosol, mitochondrion | 82.55 | 74.55 |
| GSMUA_Achr1P27230_001 | Banana | cytosol | 73.83 | 74.32 |
| GSMUA_Achr1P04700_001 | Banana | cytosol | 73.15 | 73.65 |
| GSMUA_Achr6P24410_001 | Banana | cytosol | 73.15 | 73.15 |
| GSMUA_Achr5P09010_001 | Banana | cytosol | 72.48 | 72.97 |
| PGSC0003DMT400097662 | Potato | cytosol, mitochondrion | 84.56 | 72.83 |
| GSMUA_AchrUn_... | Banana | cytosol | 69.13 | 70.07 |
| CDY30947 | Canola | cytosol | 95.97 | 68.42 |
| AT3G43810.2 | Thale cress | cytosol | 97.32 | 67.76 |
| GSMUA_Achr7P07720_001 | Banana | cytosol | 67.11 | 67.57 |
| CDY57144 | Canola | cytosol | 65.1 | 66.44 |
| CDY21220 | Canola | cytosol | 95.3 | 64.25 |
| GSMUA_Achr10P... | Banana | cytosol | 79.87 | 62.96 |
| GSMUA_Achr10P... | Banana | cytosol | 77.85 | 61.7 |
| AT2G41090.1 | Thale cress | cytosol | 63.09 | 49.21 |
| GSMUA_Achr3P25390_001 | Banana | cytosol | 60.4 | 49.18 |
| GSMUA_Achr3P26750_001 | Banana | cytosol, plasma membrane | 47.65 | 47.97 |
| GSMUA_Achr1P14070_001 | Banana | cytosol | 66.44 | 43.81 |
| GSMUA_Achr6P10140_001 | Banana | cytosol | 44.97 | 41.1 |
| GSMUA_Achr9P21860_001 | Banana | cytosol, mitochondrion | 40.94 | 37.42 |
| GSMUA_Achr8P29750_001 | Banana | cytosol, mitochondrion | 40.94 | 37.2 |
| GSMUA_Achr1P25220_001 | Banana | cytosol | 40.27 | 36.81 |
| GSMUA_Achr8P05790_001 | Banana | cytosol | 46.31 | 28.16 |
| AT2G41100.1 | Thale cress | cytosol | 57.72 | 26.54 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P25040_001 | EnsemblPlants:GSMUA_Achr3T25040_001 | EnsemblPlantsGene:GSMUA_Achr3G25040_001 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR23050 |
| PANTHER:PTHR23050:SF250 | PFAM:PF13499 | PFscan:PS50222 | ScanProsite:PS00018 | SMART:SM00054 | SUPFAM:SSF47473 |
| UniParc:UPI000295BD06 | UniProt:M0SHM0 | MapMan:35.1 | : | : | : |
Description
Calmodulin [Source:GMGC_GENE;Acc:GSMUA_Achr3G25040_001]
Coordinates
chr3:+:25376274..25378725
Molecular Weight (calculated)
16890.7 Da
IEP (calculated)
3.887
GRAVY (calculated)
-0.617
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEQLTDEQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMARKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKIMMAK
101: ISAAELRHVM TNLGEKLTDE EVDEMIREAD VDGDGQINYE EFVKIMMAK
001: MADQLTDEQI SEFKEAFSLF DKDGDGCITT KELGTVMRSL GQNPTEAELQ DMINEVDADG NGTIDFPEFL NLMAKKMKDT DSEEELKEAF RVFDKDQNGF
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
101: ISAAELRHVM TNLGEKLTDE EVEEMIREAD VDGDGQINYE EFVKIMMAK
Arabidopsis Description
CAM1Calmodulin 1 [Source:UniProtKB/TrEMBL;Acc:F4K8M2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.