Factsheet for GSMUA_Achr5P05070_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
vacuole 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P01120_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P25040_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr8P05790_001
GSMUA_Achr9P17280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13320.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr11P...	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr2P01120_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr3P09330_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr3P25040_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr5P07820_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr5P27590_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr6P15990_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr6P23670_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr8P05790_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr9P17280_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr11P...	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr2P01120_001	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr3P09330_001	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr3P25040_001	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr5P07820_001	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr5P27590_001	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr6P15990_001	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr6P23670_001	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr8P05790_001	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr9P17280_001	AT2G41100.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58038	Soybean	plasma membrane	50.88	76.41
GSMUA_Achr3P05320_001	Banana	cytosol, peroxisome, plasma membrane	77.43	76.25
GSMUA_Achr3P05680_001	Banana	plasma membrane	63.72	72.0
Os02t0138900-01	Rice	golgi, plasma membrane	39.6	71.31
CDY23589	Canola	golgi, peroxisome, plasma membrane	67.04	71.29
VIT_19s0015g01320.t01	Wine grape	cytosol, peroxisome, vacuole	70.13	71.08
GSMUA_Achr11P...	Banana	golgi, peroxisome, plasma membrane	66.59	70.66
Solyc12g011070.1.1	Tomato	plasma membrane	53.32	70.47
CDY44007	Canola	cytosol, peroxisome, plasma membrane	67.48	69.32
AT1G55730.2	Thale cress	plasma membrane	67.48	69.16
Bra034690.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.48	69.16
PGSC0003DMT400079826	Potato	cytosol, peroxisome, plasma membrane	66.81	69.11
CDY24195	Canola	golgi, peroxisome, plasma membrane	66.81	68.79
AT3G13320.1	Thale cress	golgi, peroxisome, vacuole	66.81	68.48
KRH46490	Soybean	golgi, peroxisome, plasma membrane	64.82	68.46
Solyc07g056110.2.1	Tomato	cytosol, peroxisome, plasma membrane	67.92	67.92
Bra030840.1-P	Field mustard	plasma membrane	61.73	67.88
CDY43356	Canola	golgi, peroxisome, plasma membrane	66.15	67.65
CDY42379	Canola	plasma membrane	61.5	67.64
CDY10539	Canola	plasma membrane	61.06	67.15
CDX75703	Canola	peroxisome	67.04	65.87
EES06255	Sorghum	golgi, peroxisome, plasma membrane	61.5	64.8
CDY26090	Canola	plasma membrane	62.61	64.17
KRG98412	Soybean	plasma membrane	64.16	64.02
TraesCS6B01G137200.1	Wheat	mitochondrion	64.82	63.97
TraesCS6D01G096900.1	Wheat	mitochondrion	64.6	63.76
Bra039385.1-P	Field mustard	plasma membrane	65.71	62.92
PGSC0003DMT400020114	Potato	cytosol, peroxisome, plasma membrane	62.17	61.76
Bra001499.1-P	Field mustard	mitochondrion	67.04	60.97
CDX82545	Canola	mitochondrion	67.04	60.6
AT1G55720.1	Thale cress	plasma membrane	62.61	60.6
TraesCS6A01G108700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, peroxisome	64.6	59.84
KRH47395	Soybean	mitochondrion	23.01	47.06
Zm00001d015225_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	46.9	43.89
GSMUA_Achr4P06600_001	Banana	extracellular, golgi, vacuole	11.28	43.59
GSMUA_Achr3P29210_001	Banana	golgi, peroxisome, plasma membrane	43.58	43.01
GSMUA_Achr8P19620_001	Banana	plasma membrane	37.83	41.2
GSMUA_Achr4P06590_001	Banana	cytosol, golgi, peroxisome	33.41	40.81
KRH46489	Soybean	cytosol, peroxisome, plasma membrane	58.85	37.05
VIT_12s0057g01500.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	70.8	29.01

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	InterPro:CAX	InterPro:CaH_exchang	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150
GO:GO:0008324	GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588
GO:GO:0098655	EnsemblPlantsGene:GSMUA_Achr5G05070_001	EnsemblPlants:GSMUA_Achr5P05070_001	EnsemblPlants:GSMUA_Achr5T05070_001	UniProt:M0SVT6	InterPro:NaCa_Exmemb
PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF34	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846	TMHMM:TMhelix
UniParc:UPI000295B7DA	:	:	:	:	:

Description

Vacuolar cation/proton exchanger 5 [Source:GMGC_GENE;Acc:GSMUA_Achr5G05070_001]

Coordinates

chr5:-:3729705..3735183

Molecular Weight (calculated)

49349.2 Da

IEP (calculated)

4.735

GRAVY (calculated)

0.467

Length

452 amino acids

Sequence
(BLAST)

001: MDKINEKPQL AIVHSHLEMG SMDGRSEHEF EDESLVTPVN LSRRSNGLNG GYHGSFSTAE QDTNIRSLND SLWRTLKVVL FTSKINILMP CGPLAVFIHH
101: SFDDKGWVFF LSLLGIIPLA ERLGFATEQL AFFTGPTVGG LLNATFGNAT ELIISIHALK GGMIRVVQQS LLGSILSNML LVLGCAFFSG GIVFLKKEQV
201: FDKAAAVVNS GLLLMAVMGL LFPAVLHSTH SEVHYGKSEL ALSRFSSCIM LVAYASYLVF QLKDQRDSYD PVGEEGCQNE GSTDDEDEVA EISKWEAITW
301: LAILTVWISV LSDYLVDAIQ GASVAWNIPV AFISVILLPI VGNAAEHASA IIFAMKDKLD ISLGVAIGSS TQISMFGIPF CVVVGWIMGQ PMDLNFQLFE
401: TATLFITVLV VAFMLQEGTS NYFKGLMLML CYLIVAASFF VHVDPPVDDK KP

Best Arabidopsis Sequence Match ( AT1G55730.2 )
(BLAST)

001: MGCCKVPALI QAQVEMGLVN DVEHKSLFRR DTDSPERKAA SLMEQGSLSA SFRECSTKTP NNSVLQSFKI VILSNKLNLL LPFGPLAILL HYLTDNKGWI
101: FLLSLVGITP LAERLGYATE QLACYTGSTV GGLLNATFGN VTELIISIFA LKSGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFSQKE QVFDKGNAVV
201: NSGLLLMAVM GLLFPAVLHY THSEVHAGSS ELALSRFSSC IMLVAYAAYL FFQLKSQPSS YTPLTEETNQ NEETSDDDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWKIP ISFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG AQMDLNFQLF ETATLFITVI
401: VVAFFLQEGT SNYFKGLMLI LCYLIVAASF FVHEDPHQDD I

Arabidopsis Description

CAX5Vacuolar cation/proton exchanger 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L783]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.