CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75703	Canola	peroxisome	90.6	98.48
Bra001499.1-P	Field mustard	mitochondrion	97.8	98.39
CDY23589	Canola	golgi, peroxisome, plasma membrane	80.4	94.59
CDY44007	Canola	cytosol, peroxisome, plasma membrane	83.2	94.55
CDY24195	Canola	golgi, peroxisome, plasma membrane	81.6	92.94
CDY43356	Canola	golgi, peroxisome, plasma membrane	81.4	92.08
AT3G13320.1	Thale cress	golgi, peroxisome, vacuole	80.0	90.7
CDY42379	Canola	plasma membrane	67.2	81.75
CDY10539	Canola	plasma membrane	66.6	81.02
CDY26090	Canola	plasma membrane	69.6	78.91
KRH58038	Soybean	plasma membrane	44.8	74.42
VIT_19s0015g01320.t01	Wine grape	cytosol, peroxisome, vacuole	61.8	69.28
KRH46490	Soybean	golgi, peroxisome, plasma membrane	59.0	68.93
Os02t0138900-01	Rice	golgi, plasma membrane	33.8	67.33
GSMUA_Achr5P05070_001	Banana	cytosol, peroxisome, plasma membrane	60.6	67.04
KRG98412	Soybean	plasma membrane	59.0	65.12
EES06255	Sorghum	golgi, peroxisome, plasma membrane	52.4	61.07
GSMUA_Achr3P05320_001	Banana	cytosol, peroxisome, plasma membrane	55.6	60.57
TraesCS6D01G096900.1	Wheat	mitochondrion	53.0	57.86
TraesCS6B01G137200.1	Wheat	mitochondrion	52.4	57.21
TraesCS6A01G108700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, peroxisome	52.8	54.1
KRH47395	Soybean	mitochondrion	20.6	46.61
CDY29050	Canola	golgi, plasma membrane, plastid	39.4	46.35
CDX90630	Canola	golgi, peroxisome, plasma membrane, plastid	40.6	44.13
Zm00001d015225_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	42.2	43.69
CDX74903	Canola	golgi, peroxisome, plasma membrane, plastid	39.2	42.15
CDX91434	Canola	plasma membrane	39.0	41.94
CDY18402	Canola	plasma membrane	39.0	41.94
CDX93324	Canola	plasma membrane	39.0	41.94
CDY40303	Canola	plastid	37.6	38.52
KRH46489	Soybean	cytosol, peroxisome, plasma membrane	54.2	37.74
CDY10497	Canola	plastid	28.0	36.18

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	GO:A0A078D0G7	InterPro:CAX	EnsemblPlants:CDX82545
ProteinID:CDX82545	ProteinID:CDX82545.1	InterPro:CaH_exchang	ncoils:Coil	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150	GO:GO:0008324
GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00137707001	InterPro:NaCa_Exmemb
PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF34	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846	TMHMM:TMhelix
UniParc:UPI0004EE28AE	SEG:seg	:	:	:	:

Description

BnaA03g32760D

Coordinates

chrLK031828:-:1857750..1860787

Molecular Weight (calculated)

55006.4 Da

IEP (calculated)

5.388

GRAVY (calculated)

0.469

Length

500 amino acids

Sequence
(BLAST)

001: MRDLLSGTTV VKRSHTRRKF IPFSPCFGSH ERVMSHCKVP ALIEAQVEMG SVNELEHKSL FRREEDDSTQ AKAASLMEQG SLSPSFHEHA TKSPKNSVIK
101: SIKIVILSNK LNLLLPFGPL AILVHYMVDS KGWVFLLSLI GITPLAERLG YATEQLAFYT GPTVGGLLNA TFGNVTELII SIFALKNGMI RVVQQTLLGS
201: ILSNMLLVLG CAFFCGGLVF HQKDQVFDKG IAVVNSGLLL MAVMGILFPA VLYYTHSEVH TGSSELALSR FSSCIMLIAY AAYLFFQLKS QSSSYSRLEE
301: EANQNEEASG EDEDPEISKW EAIIWLSILT AWVSLLSGYL VDAIEGASVS WNIPIAFISV ILLPIVGNAA EHAGAIMFAM KDKLDLSLGV AIGSSIQISM
401: FVVPFCVVIG WMMGEQMDLN FQLFETAMLF ITVIVVAFFL QEGTSNYFKG LMLILCYLIV AASFFVHEDP HQDCSGVKQV GSSLQADDFT NVNLILMWFP

Best Arabidopsis Sequence Match ( AT3G13320.1 )
(BLAST)

001: MSCCKVPVLI EAQVEMVSAN ELENKSLFRQ EEDATQTKEA SLMEQGSLST SFPQHTPKAP KNSVLNSIKI VIFCNKLNLL LPFGPLAILV HYMIDSKGWV
101: FLLTLVGITP LAERLGYATE QLACYTGPTV GGLLNATFGN VTELIISIFA LKNGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFYQKD QVFDKGIATV
201: NSGLLLMAVM GILFPAVLHY THSEVHAGSS ELALSRFSSC IMLIAYAAYL FFQLKSQSNS YSPLDEESNQ NEETSAEDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWNIP IAFISTILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG QQMDLNFQLF ETAMLFITVI
401: VVAFFLQEGS SNYFKGLMLI LCYLIVAASF FVHEDPHQDG I

Arabidopsis Description

CAX2Vacuolar cation/proton exchanger 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39254]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.