Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 2
- mitochondrion 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY23589 | Canola | golgi, peroxisome, plasma membrane | 86.96 | 94.12 |
| CDY44007 | Canola | cytosol, peroxisome, plasma membrane | 90.0 | 94.09 |
| CDY24195 | Canola | golgi, peroxisome, plasma membrane | 88.7 | 92.94 |
| CDY43356 | Canola | golgi, peroxisome, plasma membrane | 88.26 | 91.86 |
| CDX82545 | Canola | mitochondrion | 98.48 | 90.6 |
| AT3G13320.1 | Thale cress | golgi, peroxisome, vacuole | 86.74 | 90.48 |
| CDY42379 | Canola | plasma membrane | 72.83 | 81.51 |
| CDY10539 | Canola | plasma membrane | 72.17 | 80.78 |
| CDY26090 | Canola | plasma membrane | 75.22 | 78.46 |
| KRH58038 | Soybean | plasma membrane | 48.7 | 74.42 |
| VIT_19s0015g01320.t01 | Wine grape | cytosol, peroxisome, vacuole | 67.17 | 69.28 |
| KRH46490 | Soybean | golgi, peroxisome, plasma membrane | 64.13 | 68.93 |
| Os02t0138900-01 | Rice | golgi, plasma membrane | 36.74 | 67.33 |
| GSMUA_Achr5P05070_001 | Banana | cytosol, peroxisome, plasma membrane | 65.87 | 67.04 |
| KRG98412 | Soybean | plasma membrane | 64.13 | 65.12 |
| EES06255 | Sorghum | golgi, peroxisome, plasma membrane | 56.74 | 60.84 |
| GSMUA_Achr3P05320_001 | Banana | cytosol, peroxisome, plasma membrane | 60.43 | 60.57 |
| TraesCS6D01G096900.1 | Wheat | mitochondrion | 57.61 | 57.86 |
| TraesCS6B01G137200.1 | Wheat | mitochondrion | 56.96 | 57.21 |
| TraesCS6A01G108700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, peroxisome | 57.39 | 54.1 |
| KRH47395 | Soybean | mitochondrion | 22.39 | 46.61 |
| CDY29050 | Canola | golgi, plasma membrane, plastid | 42.83 | 46.35 |
| CDX90630 | Canola | golgi, peroxisome, plasma membrane, plastid | 44.13 | 44.13 |
| Zm00001d015225_P001 | Maize | cytosol, endoplasmic reticulum, plasma membrane | 45.87 | 43.69 |
| CDX74903 | Canola | golgi, peroxisome, plasma membrane, plastid | 42.61 | 42.15 |
| CDY18402 | Canola | plasma membrane | 42.39 | 41.94 |
| CDX93324 | Canola | plasma membrane | 42.39 | 41.94 |
| CDX91434 | Canola | plasma membrane | 42.39 | 41.94 |
| CDY40303 | Canola | plastid | 40.87 | 38.52 |
| KRH46489 | Soybean | cytosol, peroxisome, plasma membrane | 58.7 | 37.6 |
| CDY10497 | Canola | plastid | 30.43 | 36.18 |
Protein Annotations
| Gene3D:1.20.1420.30 | Gene3D:1.20.58.1130 | MapMan:24.2.9.1.1 | GO:A0A078CKW0 | InterPro:CAX | EnsemblPlants:CDX75703 |
| ProteinID:CDX75703 | ProteinID:CDX75703.1 | InterPro:CaH_exchang | ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0006816 | GO:GO:0008150 | GO:GO:0008324 |
| GO:GO:0015369 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00123609001 | InterPro:NaCa_Exmemb |
| PFAM:PF01699 | PANTHER:PTHR31503 | PANTHER:PTHR31503:SF34 | TIGRFAMs:TIGR00378 | TIGRFAMs:TIGR00846 | TMHMM:TMhelix |
| UniParc:UPI0004EF432E | SEG:seg | : | : | : | : |
Description
BnaC03g37860D
Coordinates
chrLK031805:+:13491..16309
Molecular Weight (calculated)
50361.6 Da
IEP (calculated)
4.816
GRAVY (calculated)
0.492
Length
460 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHCKVPALI EAQVEMGSVN ELEHKSLFRR EEDDSTHTKA ASLMEQGSLS PSFHEHATKS PKNSVIKSIK IVILSNKLNL LLPFGPLAIL VHYMVDSKGW
101: VFLLSLIGIT PLAERLGYAT EQLAFYTGPT VGGLLNATFG NVTELIISIF ALKNGMIRVV QQTLLGSILS NMLLVLGCAF FCGGLVFHQK DQVFDKGIAV
201: VNSGLLLMAV MGILFPAVLY YTHSEVHTGS SELALSRFSS CIMLIAYAAY LFFQLKSQSS SYSRLEEEAN QNEEASGEDE DPEISKWEAI IWLSILTAWV
301: SLLSGYLVDA IEGASVSWNI PIAFISVILL PIVGNAAEHA GAIMFAMKDK LDLSLGVAIG SSIQISMFVV PFCVVIGWMM GEQMDLNFQL FETAMLFITV
401: IVVAFFLQEG TSNYFKGLML ILCYLIVAAS FFVHEDPHQE SGVKQAGSSL QADDFTNTKF
101: VFLLSLIGIT PLAERLGYAT EQLAFYTGPT VGGLLNATFG NVTELIISIF ALKNGMIRVV QQTLLGSILS NMLLVLGCAF FCGGLVFHQK DQVFDKGIAV
201: VNSGLLLMAV MGILFPAVLY YTHSEVHTGS SELALSRFSS CIMLIAYAAY LFFQLKSQSS SYSRLEEEAN QNEEASGEDE DPEISKWEAI IWLSILTAWV
301: SLLSGYLVDA IEGASVSWNI PIAFISVILL PIVGNAAEHA GAIMFAMKDK LDLSLGVAIG SSIQISMFVV PFCVVIGWMM GEQMDLNFQL FETAMLFITV
401: IVVAFFLQEG TSNYFKGLML ILCYLIVAAS FFVHEDPHQE SGVKQAGSSL QADDFTNTKF
001: MSCCKVPVLI EAQVEMVSAN ELENKSLFRQ EEDATQTKEA SLMEQGSLST SFPQHTPKAP KNSVLNSIKI VIFCNKLNLL LPFGPLAILV HYMIDSKGWV
101: FLLTLVGITP LAERLGYATE QLACYTGPTV GGLLNATFGN VTELIISIFA LKNGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFYQKD QVFDKGIATV
201: NSGLLLMAVM GILFPAVLHY THSEVHAGSS ELALSRFSSC IMLIAYAAYL FFQLKSQSNS YSPLDEESNQ NEETSAEDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWNIP IAFISTILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG QQMDLNFQLF ETAMLFITVI
401: VVAFFLQEGS SNYFKGLMLI LCYLIVAASF FVHEDPHQDG I
101: FLLTLVGITP LAERLGYATE QLACYTGPTV GGLLNATFGN VTELIISIFA LKNGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFYQKD QVFDKGIATV
201: NSGLLLMAVM GILFPAVLHY THSEVHAGSS ELALSRFSSC IMLIAYAAYL FFQLKSQSNS YSPLDEESNQ NEETSAEDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWNIP IAFISTILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG QQMDLNFQLF ETAMLFITVI
401: VVAFFLQEGS SNYFKGLMLI LCYLIVAASF FVHEDPHQDG I
Arabidopsis Description
CAX2Vacuolar cation/proton exchanger 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39254]
SUBAcon: [peroxisome,golgi,vacuole]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.