CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:

plastid 2
mitochondrion 2
golgi 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90630	Canola	golgi, peroxisome, plasma membrane, plastid	96.94	89.57
AT3G51860.2	Thale cress	plastid	82.59	75.0
CDY18402	Canola	plasma membrane	80.94	73.98
CDX74903	Canola	golgi, peroxisome, plasma membrane, plastid	80.71	73.76
CDX93324	Canola	plasma membrane	80.71	73.76
CDX91434	Canola	plasma membrane	80.47	73.55
KRH38810	Soybean	extracellular, golgi, vacuole	41.65	71.95
KRH65744	Soybean	golgi, peroxisome, plasma membrane	72.71	68.51
KRH75989	Soybean	golgi, peroxisome, plasma membrane	72.47	67.54
VIT_08s0007g02240.t01	Wine grape	golgi, peroxisome, plasma membrane	71.06	67.41
KRH00226	Soybean	plastid	71.06	67.26
KRH49368	Soybean	plastid	70.82	67.04
PGSC0003DMT400030772	Potato	plasma membrane, plastid	71.06	66.23
KRH65739	Soybean	plastid	69.18	65.92
Solyc09g005260.2.1	Tomato	plastid	69.65	65.2
GSMUA_Achr3P29210_001	Banana	golgi, peroxisome, plasma membrane	67.53	62.66
OQU86993	Sorghum	plasma membrane	44.71	61.29
TraesCS2A01G444600.1	Wheat	plasma membrane	62.35	60.92
GSMUA_Achr4P06590_001	Banana	cytosol, golgi, peroxisome	52.47	60.27
TraesCS2D01G443700.2	Wheat	plasma membrane	62.35	59.95
Os01t0557500-01	Rice	vacuole	62.82	59.2
HORVU2Hr1G102840.16	Barley	endoplasmic reticulum, plasma membrane	62.82	58.68
TraesCS3A01G202800.1	Wheat	plastid	63.76	58.66
TraesCS3D01G206400.1	Wheat	plastid	63.76	58.66
Os05t0594200-01	Rice	plastid	61.65	57.84
Zm00001d044533_P003	Maize	golgi, mitochondrion, peroxisome, plasma membrane, plastid	62.82	57.79
TraesCS2B01G465600.1	Wheat	plastid	62.12	57.39
GSMUA_Achr8P19620_001	Banana	plasma membrane	55.29	56.63
HORVU3Hr1G049060.8	Barley	endoplasmic reticulum, peroxisome, plasma membrane, plastid	60.24	54.01
KXG22713	Sorghum	plasma membrane	62.35	52.79
CDY40303	Canola	plastid	59.76	52.05
Zm00001d009763_P001	Maize	cytosol, mitochondrion, plasma membrane, plastid	62.35	51.36
Os02t0314300-00	Rice	cytosol, peroxisome, vacuole	54.35	51.33
CDY10497	Canola	plastid	45.65	50.13
Zm00001d009397_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	11.06	48.96
EES04904	Sorghum	cytosol, peroxisome, vacuole	52.24	48.47
CDY42379	Canola	plasma membrane	44.94	46.47
CDY23589	Canola	golgi, peroxisome, plasma membrane	46.12	46.12
CDY10539	Canola	plasma membrane	44.47	45.99
CDY24195	Canola	golgi, peroxisome, plasma membrane	46.35	44.87
CDY44007	Canola	cytosol, peroxisome, plasma membrane	45.88	44.32
CDY43356	Canola	golgi, peroxisome, plasma membrane	45.88	44.12
CDY26090	Canola	plasma membrane	44.71	43.08
CDX75703	Canola	peroxisome	46.35	42.83
CDX82545	Canola	mitochondrion	46.35	39.4

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	GO:A0A078GRD5	UniProt:A0A078GRD5	InterPro:CAX
EnsemblPlants:CDY29050	ProteinID:CDY29050	ProteinID:CDY29050.1	InterPro:CaH_exchang	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150	GO:GO:0008324
GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588	GO:GO:0098655
EnsemblPlantsGene:GSBRNA2T00041789001	InterPro:NaCa_Exmemb	PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF33	TIGRFAMs:TIGR00378
TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI0004EEA48A	SEG:seg	:	:

Description

BnaC07g32560DBnaC07g32560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GRD5]

Coordinates

chrLK032229:+:336904..340756

Molecular Weight (calculated)

45889.8 Da

IEP (calculated)

6.353

GRAVY (calculated)

0.690

Length

425 amino acids

Sequence
(BLAST)

001: MSSSSLRKKS DLRLIQKVPC KSLKNVLSNL QEVILGTKLA VLFLAIPLAV IADYYHYGRP LIFGLSLTGL TPLAERVSFL TGQLAFYTGP TVGGLLNATC
101: GNATELIIAI LALANNKVAV VKYSLLGSIL SNLLLVLGSS LFCGGIANIR REQRFDRKQA DVNFFLLLMG LLCHLLPLLL KYAATGEASA SLINKMSLSL
201: SRTSSIVMLI AYIAYLIFQL WTHRQLFEAQ EDDEDDTYND EVTVEENPVI GFWSGFAWLA GMTLVIALLS EYVVATIEDA SDSWGLSVSF ISIILLPIVG
301: NAAEHAGAII FAFKNKLDIS LGVALGSATQ ISLFVVPLSV IVAWIMGIKM DLNFNILETS CLALAIIITA FTLQDGTSHY MKGLVLMLCY VIIAACFFVD
401: QIPQPKGTGL GMQPKNSVGG GFVSA

Best Arabidopsis Sequence Match ( AT3G51860.1 )
(BLAST)

001: MGSIVEPWAA IAENGNANVT AKGSSRELRH GRTAHNMSSS SLRKKSDLRL VQKVPCKTLK NILSNLQEVI LGTKLTLLFL AIPLAILANS YNYGRPLIFG
101: LSLIGLTPLA ERVSFLTEQL AFYTGPTVGG LLNATCGNAT ELIIAILALA NNKVAVVKYS LLGSILSNLL LVLGTSLFFG GIANIRREQR FDRKQADVNF
201: FLLLMGLLCH LLPLLLKYAA TGEVSTSMIN KMSLTLSRTS SIVMLIAYIA YLIFQLWTHR QLFEAQQDDD DAYDDEVSVE ETPVIGFWSG FAWLVGMTIV
301: IALLSEYVVD TIEDASDSWG LSVSFISIIL LPIVGNAAEH AGAIIFAFKN KLDISLGVAL GSATQISLFV VPLSVIVAWI LGIKMDLNFN ILETSSLALA
401: IIITAFTLQD GTSHYMKGLV LLLCYVIIAA CFFVDQIPQP NDLDVGLQPM NNLGEVFSA

Arabidopsis Description

CAX3Cation exchanger 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.