Factsheet for PGSC0003DMT400030772

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 4
plasma membrane 2
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g005260.2.1	Tomato	plastid	96.49	96.92
VIT_08s0007g02240.t01	Wine grape	golgi, peroxisome, plasma membrane	73.68	75.0
KRH38810	Soybean	extracellular, golgi, vacuole	39.91	73.98
KRH65744	Soybean	golgi, peroxisome, plasma membrane	72.15	72.95
KRH65739	Soybean	plastid	70.83	72.42
KRH00226	Soybean	plastid	70.61	71.71
KRH75989	Soybean	golgi, peroxisome, plasma membrane	71.71	71.71
KRH49368	Soybean	plastid	70.18	71.27
CDY29050	Canola	golgi, plasma membrane, plastid	66.23	71.06
Bra012833.1-P	Field mustard	golgi, plasma membrane, plastid	65.35	70.12
Bra017134.1-P	Field mustard	plasma membrane	70.61	69.25
CDX93324	Canola	plasma membrane	70.61	69.25
CDX74903	Canola	golgi, peroxisome, plasma membrane, plastid	70.39	69.03
CDX91434	Canola	plasma membrane	70.39	69.03
CDY18402	Canola	plasma membrane	70.39	69.03
Bra005131.1-P	Field mustard	plasma membrane	70.39	69.03
PGSC0003DMT400010643	Potato	plasma membrane	64.47	69.01
CDX90630	Canola	golgi, peroxisome, plasma membrane, plastid	68.86	68.26
GSMUA_Achr4P06590_001	Banana	cytosol, golgi, peroxisome	55.26	68.11
TraesCS2A01G444600.1	Wheat	plasma membrane	64.47	67.59
GSMUA_Achr3P29210_001	Banana	golgi, peroxisome, plasma membrane	67.32	67.03
TraesCS3A01G202800.1	Wheat	plastid	66.45	65.58
TraesCS3D01G206400.1	Wheat	plastid	66.23	65.37
HORVU2Hr1G102840.16	Barley	endoplasmic reticulum, plasma membrane	64.91	65.05
AT3G51860.2	Thale cress	plastid	66.23	64.53
AT2G38170.3	Thale cress	plasma membrane, plastid	67.11	64.42
Os01t0557500-01	Rice	vacuole	63.6	64.3
TraesCS2D01G443700.2	Wheat	plasma membrane	62.06	64.03
TraesCS2B01G465600.1	Wheat	plastid	64.04	63.48
OQU86993	Sorghum	plasma membrane	41.67	61.29
Zm00001d044533_P003	Maize	golgi, mitochondrion, peroxisome, plasma membrane, plastid	61.84	61.04
Os05t0594200-01	Rice	plastid	60.53	60.93
HORVU3Hr1G049060.8	Barley	endoplasmic reticulum, peroxisome, plasma membrane, plastid	62.06	59.7
GSMUA_Achr8P19620_001	Banana	plasma membrane	52.41	57.59
AT5G01490.1	Thale cress	plastid	57.24	57.49
KXG22713	Sorghum	plasma membrane	62.94	57.17
Zm00001d009763_P001	Maize	cytosol, mitochondrion, plasma membrane, plastid	62.94	55.62
Os02t0314300-00	Rice	cytosol, peroxisome, vacuole	53.73	54.44
CDY40303	Canola	plastid	57.89	54.1
CDY10497	Canola	plastid	44.3	52.2
EES04904	Sorghum	cytosol, peroxisome, vacuole	51.75	51.53
Zm00001d009397_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	10.75	51.04
Bra009640.1-P	Field mustard	plastid	57.68	50.48
PGSC0003DMT400023736	Potato	golgi, peroxisome, plasma membrane	43.64	45.85
PGSC0003DMT400079826	Potato	cytosol, peroxisome, plasma membrane	42.98	44.85
PGSC0003DMT400020114	Potato	cytosol, peroxisome, plasma membrane	41.45	41.54

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	EntrezGene:102582937	MapMan:24.2.9.1.1	InterPro:CAX	InterPro:CaH_exchang
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816
GO:GO:0008150	GO:GO:0008324	GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
GO:GO:0070588	GO:GO:0098655	UniProt:M1AUR8	InterPro:NaCa_Exmemb	PFAM:PF01699	EnsemblPlantsGene:PGSC0003DMG400011787
PGSC:PGSC0003DMG400011787	EnsemblPlants:PGSC0003DMT400030772	PANTHER:PTHR31503	PANTHER:PTHR31503:SF1	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846
TMHMM:TMhelix	UniParc:UPI000294B263	RefSeq:XP_006363592.1	SEG:seg	:	:

Description

Vacuolar cation/proton exchanger 1a [Source:PGSC_GENE;Acc:PGSC0003DMG400011787]

Coordinates

chr9:+:8794651..8800088

Molecular Weight (calculated)

49187.5 Da

IEP (calculated)

6.577

GRAVY (calculated)

0.636

Length

456 amino acids

Sequence
(BLAST)

001: MASSSPAAET WLLENGHIKP LSKEMRHGHG RSHGRTAHNV SSSSLRKKSD LTLVRKVPCA IVRDVLANVQ EVILGTKLFV LFIAIPIAIV AHYKNFGRSW
101: VFGLSLLGLT PLAERVSFLT EQIAFFTGPT VGGLLNATCG NATELIIAIF ALIQHKVDVV KYSLLGSILS NLLLVLGTSL FCGGIANISK EQKYDRKQAD
201: VNSLLLLLGL LCHVLPLMFR YAGVGESAAI TAQATLNLSR VSCIVMLLAY FGYLVFQLWT HRQLFDAQAE DNEGDDNEDE EAVLGFWSAF AWLVGMTILI
301: ALLSEYVVGT IEAASDSWGI SVSFISVILL PIVGNAAEHA GAIIFAFKNK LDISLGVALG SATQIAMFVV PLCVIVSWII GVRMDLDFSL LETSSLALAI
401: IVTAFTLQDG TSHYIKGLVL LLCYIVIGAC FFVSNIPQNQ PNGVNLGSSS EGIMRV

Best Arabidopsis Sequence Match ( AT3G51860.1 )
(BLAST)

001: MGSIVEPWAA IAENGNANVT AKGSSRELRH GRTAHNMSSS SLRKKSDLRL VQKVPCKTLK NILSNLQEVI LGTKLTLLFL AIPLAILANS YNYGRPLIFG
101: LSLIGLTPLA ERVSFLTEQL AFYTGPTVGG LLNATCGNAT ELIIAILALA NNKVAVVKYS LLGSILSNLL LVLGTSLFFG GIANIRREQR FDRKQADVNF
201: FLLLMGLLCH LLPLLLKYAA TGEVSTSMIN KMSLTLSRTS SIVMLIAYIA YLIFQLWTHR QLFEAQQDDD DAYDDEVSVE ETPVIGFWSG FAWLVGMTIV
301: IALLSEYVVD TIEDASDSWG LSVSFISIIL LPIVGNAAEH AGAIIFAFKN KLDISLGVAL GSATQISLFV VPLSVIVAWI LGIKMDLNFN ILETSSLALA
401: IIITAFTLQD GTSHYMKGLV LLLCYVIIAA CFFVDQIPQP NDLDVGLQPM NNLGEVFSA

Arabidopsis Description

CAX3Cation exchanger 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.