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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plastid, plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • plastid 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plasma membrane, plastid
Any Predictor:golgi, nucleus, peroxisome, plastid
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra012833.1-P Field mustard golgi, plasma membrane, plastid 91.52 99.06
CDY29050 Canola golgi, plasma membrane, plastid 89.57 96.94
AT3G51860.2 Thale cress plastid 82.39 80.98
CDX74903 Canola golgi, peroxisome, plasma membrane, plastid 78.7 77.85
CDX91434 Canola plasma membrane 78.48 77.63
CDY18402 Canola plasma membrane 78.26 77.42
CDX93324 Canola plasma membrane 78.04 77.2
KRH38810 Soybean extracellular, golgi, vacuole 38.48 71.95
KRH65744 Soybean golgi, peroxisome, plasma membrane 70.0 71.4
KRH75989 Soybean golgi, peroxisome, plasma membrane 70.0 70.61
VIT_08s0007g02240.t01 Wine grape golgi, peroxisome, plasma membrane 68.48 70.31
KRH00226 Soybean plastid 68.48 70.16
KRH49368 Soybean plastid 68.26 69.93
PGSC0003DMT400030772 Potato plasma membrane, plastid 68.26 68.86
KRH65739 Soybean plastid 66.74 68.83
Solyc09g005260.2.1 Tomato plastid 67.17 68.06
GSMUA_Achr3P29210_001 Banana golgi, peroxisome, plasma membrane 65.22 65.5
GSMUA_Achr4P06590_001 Banana cytosol, golgi, peroxisome 51.52 64.05
TraesCS2A01G444600.1 Wheat plasma membrane 59.57 62.99
HORVU2Hr1G102840.16 Barley endoplasmic reticulum, plasma membrane 60.43 61.1
TraesCS2D01G443700.2 Wheat plasma membrane 58.48 60.86
Os01t0557500-01 Rice vacuole 59.57 60.75
OQU86993 Sorghum plasma membrane 40.87 60.65
TraesCS3A01G202800.1 Wheat plastid 60.22 59.96
TraesCS3D01G206400.1 Wheat plastid 60.22 59.96
Os05t0594200-01 Rice plastid 58.7 59.6
TraesCS2B01G465600.1 Wheat plastid 59.35 59.35
Zm00001d044533_P003 Maize golgi, mitochondrion, peroxisome, plasma membrane, plastid 59.57 59.31
GSMUA_Achr8P19620_001 Banana plasma membrane 51.96 57.59
HORVU3Hr1G049060.8 Barley endoplasmic reticulum, peroxisome, plasma membrane, plastid 57.39 55.7
KXG22713 Sorghum plasma membrane 60.22 55.18
CDY40303 Canola plastid 57.83 54.51
Zm00001d009763_P001 Maize cytosol, mitochondrion, plasma membrane, plastid 60.22 53.68
CDY10497 Canola plastid 45.0 53.49
Os02t0314300-00 Rice cytosol, peroxisome, vacuole 52.17 53.33
EES04904 Sorghum cytosol, peroxisome, vacuole 49.57 49.78
Zm00001d009397_P001 Maize endoplasmic reticulum, extracellular, mitochondrion, plasma membrane 10.22 48.96
CDY42379 Canola plasma membrane 42.39 47.45
CDY23589 Canola golgi, peroxisome, plasma membrane 43.7 47.29
CDY10539 Canola plasma membrane 41.96 46.96
CDY24195 Canola golgi, peroxisome, plasma membrane 44.13 46.24
CDY43356 Canola golgi, peroxisome, plasma membrane 43.7 45.48
CDY44007 Canola cytosol, peroxisome, plasma membrane 43.48 45.45
CDX75703 Canola peroxisome 44.13 44.13
CDY26090 Canola plasma membrane 41.52 43.31
CDX82545 Canola mitochondrion 44.13 40.6
Protein Annotations
Gene3D:1.20.1420.30Gene3D:1.20.58.1130MapMan:24.2.9.1.1GO:A0A078DN84InterPro:CAXEnsemblPlants:CDX90630
ProteinID:CDX90630ProteinID:CDX90630.1InterPro:CaH_exchangGO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006812GO:GO:0006816GO:GO:0008150GO:GO:0008324GO:GO:0015369
GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00151274001InterPro:NaCa_ExmembPFAM:PF01699
PANTHER:PTHR31503PANTHER:PTHR31503:SF33TIGRFAMs:TIGR00378TIGRFAMs:TIGR00846TMHMM:TMhelixUniParc:UPI0004EE576F
SEG:seg:::::
Description
BnaA03g41510D
Coordinates
chrLK031863:-:1200115..1203641
Molecular Weight (calculated)
49832.3 Da
IEP (calculated)
5.649
GRAVY (calculated)
0.532
Length
460 amino acids
Sequence
(BLAST)
001: MGSIAEPWGI SESENANGTP KGLSRELRHG KTAHNMSSSS LRKKSDLRLI QNVPCKTLKN VLSNLQEVIL GTKLALLFLA IPLAVIADYY HYGRPLIFGL
101: SLIGLTPLAE RVSFLTEQLA FYTGPTVGGL LNATCGNATE LIIAILALAN NKVAVVKYSL LGSILSNLLL VLGSSLFCGG IANIRREQRF DRKQADVNFF
201: LLLMGLLCHL LPLLLKYAAT GEASTSLINK MSLSLSRTSS IVMLIAYIAY LIFQLWTHRQ FFEAQEDDED DAYNDEVTVE ETPVIGFWSG FAWLAGMTLV
301: IALLSEYVVA TIEDASDSWG LSVSFISIIL LPIVGNAAEH AGAIIFAFKN KLDISLGVAL GSATQISLFV VPLSVIVAWI MGIKMDLNFN TLETSCLALA
401: IIITAFTLQD GTSHYMKGLV LMMCYVIIAA CFFVDQIPQP KGTGLEMQPK NSEGGGFVSA
Best Arabidopsis Sequence Match ( AT3G51860.1 )
(BLAST)
001: MGSIVEPWAA IAENGNANVT AKGSSRELRH GRTAHNMSSS SLRKKSDLRL VQKVPCKTLK NILSNLQEVI LGTKLTLLFL AIPLAILANS YNYGRPLIFG
101: LSLIGLTPLA ERVSFLTEQL AFYTGPTVGG LLNATCGNAT ELIIAILALA NNKVAVVKYS LLGSILSNLL LVLGTSLFFG GIANIRREQR FDRKQADVNF
201: FLLLMGLLCH LLPLLLKYAA TGEVSTSMIN KMSLTLSRTS SIVMLIAYIA YLIFQLWTHR QLFEAQQDDD DAYDDEVSVE ETPVIGFWSG FAWLVGMTIV
301: IALLSEYVVD TIEDASDSWG LSVSFISIIL LPIVGNAAEH AGAIIFAFKN KLDISLGVAL GSATQISLFV VPLSVIVAWI LGIKMDLNFN ILETSSLALA
401: IIITAFTLQD GTSHYMKGLV LLLCYVIIAA CFFVDQIPQP NDLDVGLQPM NNLGEVFSA
Arabidopsis Description
CAX3Cation exchanger 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSS9]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.