Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43356 | Canola | golgi, peroxisome, plasma membrane | 98.18 | 97.51 |
| CDY23589 | Canola | golgi, peroxisome, plasma membrane | 89.98 | 92.94 |
| CDY44007 | Canola | cytosol, peroxisome, plasma membrane | 92.94 | 92.73 |
| AT3G13320.1 | Thale cress | golgi, peroxisome, vacuole | 91.34 | 90.93 |
| CDX75703 | Canola | peroxisome | 92.94 | 88.7 |
| CDY42379 | Canola | plasma membrane | 76.99 | 82.24 |
| CDX82545 | Canola | mitochondrion | 92.94 | 81.6 |
| CDY10539 | Canola | plasma membrane | 76.31 | 81.51 |
| CDY26090 | Canola | plasma membrane | 79.27 | 78.91 |
| KRH58038 | Soybean | plasma membrane | 51.03 | 74.42 |
| KRH46490 | Soybean | golgi, peroxisome, plasma membrane | 66.97 | 68.69 |
| VIT_19s0015g01320.t01 | Wine grape | cytosol, peroxisome, vacuole | 69.7 | 68.61 |
| Os02t0138900-01 | Rice | golgi, plasma membrane | 38.27 | 66.93 |
| GSMUA_Achr5P05070_001 | Banana | cytosol, peroxisome, plasma membrane | 68.79 | 66.81 |
| KRG98412 | Soybean | plasma membrane | 66.97 | 64.9 |
| EES06255 | Sorghum | golgi, peroxisome, plasma membrane | 58.77 | 60.14 |
| GSMUA_Achr3P05320_001 | Banana | cytosol, peroxisome, plasma membrane | 62.87 | 60.13 |
| TraesCS6D01G096900.1 | Wheat | mitochondrion | 60.59 | 58.08 |
| TraesCS6B01G137200.1 | Wheat | mitochondrion | 59.68 | 57.21 |
| TraesCS6A01G108700.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, peroxisome | 60.14 | 54.1 |
| KRH47395 | Soybean | mitochondrion | 23.69 | 47.06 |
| CDY29050 | Canola | golgi, plasma membrane, plastid | 44.87 | 46.35 |
| CDX90630 | Canola | golgi, peroxisome, plasma membrane, plastid | 46.24 | 44.13 |
| CDX74903 | Canola | golgi, peroxisome, plasma membrane, plastid | 44.87 | 42.37 |
| CDX91434 | Canola | plasma membrane | 44.65 | 42.15 |
| CDY18402 | Canola | plasma membrane | 44.42 | 41.94 |
| CDX93324 | Canola | plasma membrane | 44.42 | 41.94 |
| Zm00001d015225_P001 | Maize | cytosol, endoplasmic reticulum, plasma membrane | 46.01 | 41.82 |
| CDY40303 | Canola | plastid | 42.6 | 38.32 |
| KRH46489 | Soybean | cytosol, peroxisome, plasma membrane | 61.96 | 37.88 |
| CDY10497 | Canola | plastid | 32.35 | 36.69 |
Protein Annotations
| Gene3D:1.20.1420.30 | Gene3D:1.20.58.1130 | MapMan:24.2.9.1.1 | GO:A0A078GCH4 | UniProt:A0A078GCH4 | InterPro:CAX |
| EnsemblPlants:CDY24195 | ProteinID:CDY24195 | ProteinID:CDY24195.1 | InterPro:CaH_exchang | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0006816 | GO:GO:0008150 | GO:GO:0008324 |
| GO:GO:0015369 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | GO:GO:0070588 | GO:GO:0098655 |
| EnsemblPlantsGene:GSBRNA2T00026291001 | InterPro:NaCa_Exmemb | PFAM:PF01699 | PANTHER:PTHR31503 | PANTHER:PTHR31503:SF34 | TIGRFAMs:TIGR00378 |
| TIGRFAMs:TIGR00846 | TMHMM:TMhelix | UniParc:UPI0004EF22B2 | : | : | : |
Description
BnaC01g37750DBnaC01g37750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GCH4]
Coordinates
chrLK032155:-:188214..191065
Molecular Weight (calculated)
48019.1 Da
IEP (calculated)
4.518
GRAVY (calculated)
0.572
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHCNVPALI EPQVEMGSVD EAENKTLFKL EEDAKQTKEA SLMEQGSLSP IFPQHITKSP KNSVLKSIKI VILSNKLNLL LPFGPLAILV HYMIDSKGWV
101: FLLSLIGITP LAERLGYATE QLAFYTGPTV GGLLNATFGN VTELIISIFA LKNGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFHQKD QVFDKGLAVV
201: NSGLLLMAVM GILFPAVLHY THSEVHAGSS ELALSRFSSC IMLIAYAAYL FFQLKSQSSS YSPLEQETNQ NEEASDEDED PEISKWESII WLSILTAWVS
301: LLSGYLVDAI EGASVSWNIP IAFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG EQMDLNFQLF ETAMLFITVI
401: VVAFFLQEGT SNYFKGLMLI LCYLIVAASF FVHEDPQQG
101: FLLSLIGITP LAERLGYATE QLAFYTGPTV GGLLNATFGN VTELIISIFA LKNGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFHQKD QVFDKGLAVV
201: NSGLLLMAVM GILFPAVLHY THSEVHAGSS ELALSRFSSC IMLIAYAAYL FFQLKSQSSS YSPLEQETNQ NEEASDEDED PEISKWESII WLSILTAWVS
301: LLSGYLVDAI EGASVSWNIP IAFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG EQMDLNFQLF ETAMLFITVI
401: VVAFFLQEGT SNYFKGLMLI LCYLIVAASF FVHEDPQQG
001: MSCCKVPVLI EAQVEMVSAN ELENKSLFRQ EEDATQTKEA SLMEQGSLST SFPQHTPKAP KNSVLNSIKI VIFCNKLNLL LPFGPLAILV HYMIDSKGWV
101: FLLTLVGITP LAERLGYATE QLACYTGPTV GGLLNATFGN VTELIISIFA LKNGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFYQKD QVFDKGIATV
201: NSGLLLMAVM GILFPAVLHY THSEVHAGSS ELALSRFSSC IMLIAYAAYL FFQLKSQSNS YSPLDEESNQ NEETSAEDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWNIP IAFISTILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG QQMDLNFQLF ETAMLFITVI
401: VVAFFLQEGS SNYFKGLMLI LCYLIVAASF FVHEDPHQDG I
101: FLLTLVGITP LAERLGYATE QLACYTGPTV GGLLNATFGN VTELIISIFA LKNGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFYQKD QVFDKGIATV
201: NSGLLLMAVM GILFPAVLHY THSEVHAGSS ELALSRFSSC IMLIAYAAYL FFQLKSQSNS YSPLDEESNQ NEETSAEDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWNIP IAFISTILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG QQMDLNFQLF ETAMLFITVI
401: VVAFFLQEGS SNYFKGLMLI LCYLIVAASF FVHEDPHQDG I
Arabidopsis Description
CAX2Vacuolar cation/proton exchanger 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39254]
SUBAcon: [peroxisome,golgi,vacuole]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.