CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plasma membrane, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT1G55730.2	Thale cress	plasma membrane	84.35	84.35
CDY42379	Canola	plasma membrane	75.28	80.78
CDY10539	Canola	plasma membrane	74.6	80.05
CDY23589	Canola	golgi, peroxisome, plasma membrane	76.64	79.53
CDY24195	Canola	golgi, peroxisome, plasma membrane	78.91	79.27
CDY43356	Canola	golgi, peroxisome, plasma membrane	78.91	78.73
CDY44007	Canola	cytosol, peroxisome, plasma membrane	78.0	78.18
CDX75703	Canola	peroxisome	78.46	75.22
KRH58038	Soybean	plasma membrane	48.07	70.43
CDX82545	Canola	mitochondrion	78.91	69.6
VIT_19s0015g01320.t01	Wine grape	cytosol, peroxisome, vacuole	65.53	64.8
KRH46490	Soybean	golgi, peroxisome, plasma membrane	62.81	64.72
GSMUA_Achr5P05070_001	Banana	cytosol, peroxisome, plasma membrane	64.17	62.61
Os02t0138900-01	Rice	golgi, plasma membrane	35.6	62.55
KRG98412	Soybean	plasma membrane	62.59	60.93
EES06255	Sorghum	golgi, peroxisome, plasma membrane	55.78	57.34
GSMUA_Achr3P05320_001	Banana	cytosol, peroxisome, plasma membrane	58.5	56.21
TraesCS6D01G096900.1	Wheat	mitochondrion	57.14	55.02
TraesCS6B01G137200.1	Wheat	mitochondrion	56.46	54.37
TraesCS6A01G108700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, peroxisome	56.92	51.43
KRH47395	Soybean	mitochondrion	22.9	45.7
CDY29050	Canola	golgi, plasma membrane, plastid	43.08	44.71
CDX90630	Canola	golgi, peroxisome, plasma membrane, plastid	43.31	41.52
Zm00001d015225_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	44.9	40.99
CDX74903	Canola	golgi, peroxisome, plasma membrane, plastid	42.63	40.43
CDY18402	Canola	plasma membrane	42.4	40.22
CDX93324	Canola	plasma membrane	42.4	40.22
CDX91434	Canola	plasma membrane	42.4	40.22
CDY40303	Canola	plastid	40.82	36.89
KRH46489	Soybean	cytosol, peroxisome, plasma membrane	56.92	34.96
CDY10497	Canola	plastid	30.39	34.63

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	GO:A0A078GI25	UniProt:A0A078GI25	InterPro:CAX
EnsemblPlants:CDY26090	ProteinID:CDY26090	ProteinID:CDY26090.1	InterPro:CaH_exchang	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150	GO:GO:0008324
GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588	GO:GO:0098655
EnsemblPlantsGene:GSBRNA2T00034709001	InterPro:NaCa_Exmemb	PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF34	TIGRFAMs:TIGR00378
TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI0004EE4933	SEG:seg	:	:

Description

BnaC06g11060DVacuolar cation/proton exchanger 5 [Source:Projected from Arabidopsis thaliana (AT1G55730) UniProtKB/Swiss-Prot;Acc:Q8L783]

Coordinates

chrLK032185:+:141855..144320

Molecular Weight (calculated)

48284.3 Da

IEP (calculated)

4.617

GRAVY (calculated)

0.601

Length

441 amino acids

Sequence
(BLAST)

001: MGCCKVPALN SNSPQAKATS FMMEQQGGSF SPSFRDNNTL LQSFKIVILS NKLNLLLPFG PLAILLHYYL TDNKGWVFLL SLVGITPLAE RLGYATEQLA
101: YYTGPTVGGL LNATFGNVTE LIISIFALKN GMIRVVQLTL LGSILSNMLL VLGCAFFCGG LVFSRKDQVF DKFLSLLLSV NTGECGCEFR IGFDGCYGLL
201: FPAVLHYTHS EIHAGSSELA LSRFSSCIML VAYAAYLFFQ LKTQPSPYTP LTEDMNQSEE TSDDDEDPEI SKWEAIIWLS ILTAWVSLLS GYLVDAIEGA
301: SVSWKIPISF ISVILLPIVG NAAEHAGAIM FAMKDKLDLS LGVAIGSSIQ ISLFAVPFCV VIGWMMGAQM DLNFQLFETA TLFITVIVVA FCIQEGTSNY
401: FKGLMLILCY LIVAASFFVH EDPHQGMLLF SMKNLLCNID A

Best Arabidopsis Sequence Match ( AT1G55720.1 )
(BLAST)

001: MYMELYLMFS NFFKSIRWCK VPAFMQAKVE MGLVNEVELK SLLEQETDSP QTNAASLMEQ GSLRERRAKA PRNSVVQSFK IVILSNKLNL LLPFGPLAIL
101: VHYLTDNKGW FFLLSLVGIT PLAERLGYAT EQLSCYTGAT VGGLLNATFG NVIELIISII ALKNGMIRVV QLTLLGSILS NILLVLGCAF FCGGLVFPGK
201: DQVFDKRNAV VSSGMLLMAV MGLLFPTFLH YTHSEVHAGS SELALSRFIS CIMLVAYAAY LFFQLKSQPS FYTEKTNQNE ETSNDDEDPE ISKWEAIIWL
301: SIFTAWVSLL SGYLVDAIEG TSVSWKIPIS FISVILLPIV GNAAEHAGAI MFAMKDKLDL SLGVAIGSSI QISMFAVPFC VVIGWMMGAQ MDLNLQLFET
401: ATLLITVIVV AFFLQLEGTS NYFKRLMLIL CYLIVAASFF VHEDPHQGTD HQQICTCRTP SYTYEIL

Arabidopsis Description

ATCAX6cation exchanger 6 [Source:TAIR;Acc:AT1G55720]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.