Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi, peroxisome
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- golgi 1
- plastid 1
- endoplasmic reticulum 1
- peroxisome 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| TraesCS1A01G308700.1 | |
| TraesCS1A01G308800.1 | |
| TraesCS1B01G319300.1 | |
| TraesCS1D01G308000.1 | |
| TraesCS2B01G113800.2 | |
| TraesCS3A01G184500.1 | |
| TraesCS3A01G191900.1 | |
| TraesCS3A01G335000.1 | |
| TraesCS3B01G219900.1 | |
| TraesCS3B01G365900.1 | |
| TraesCS3D01G188600.1 | |
| TraesCS3D01G194500.2 | |
| TraesCS3D01G328300.1 | |
| TraesCS4B01G131100.1 | |
| TraesCS4D01G126100.1 | |
| TraesCS5A01G057100.1 | |
| TraesCS5A01G057200.1 | |
| TraesCS5A01G139700.1 | |
| TraesCS5B01G059900.1 | |
| TraesCS5B01G137100.1 | |
| TraesCS5D01G068000.1 | |
| TraesCS5D01G068100.1 | |
| TraesCS5D01G153400.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G13320.1 | TraesCS1A01G308700.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS1A01G308800.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS1B01G319300.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS1D01G308000.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS2B01G113800.2 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS3A01G184500.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS3A01G191900.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS3A01G335000.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS3B01G219900.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS3B01G365900.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS3D01G188600.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS3D01G194500.2 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS3D01G328300.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS4B01G131100.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS4D01G126100.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS5A01G057100.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS5A01G057200.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS5A01G139700.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS5B01G059900.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS5B01G137100.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS5D01G068000.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS5D01G068100.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS5D01G153400.1 | AT2G41090.1 | 17360592 |
| AT3G13320.1 | TraesCS1A01G308700.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS1A01G308800.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS1B01G319300.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS1D01G308000.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS2B01G113800.2 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS3A01G184500.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS3A01G191900.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS3A01G335000.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS3B01G219900.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS3B01G365900.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS3D01G188600.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS3D01G194500.2 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS3D01G328300.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS4B01G131100.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS4D01G126100.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS5A01G057100.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS5A01G057200.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS5A01G139700.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS5B01G059900.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS5B01G137100.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS5D01G068000.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS5D01G068100.1 | AT2G41100.1 | 17360592 |
| AT3G13320.1 | TraesCS5D01G153400.1 | AT2G41100.1 | 17360592 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G137200.1 | Wheat | mitochondrion | 90.78 | 96.72 |
| TraesCS6D01G096900.1 | Wheat | mitochondrion | 90.57 | 96.51 |
| Os02t0138900-01 | Rice | golgi, plasma membrane | 38.32 | 74.5 |
| EES06255 | Sorghum | golgi, peroxisome, plasma membrane | 64.96 | 73.89 |
| KRH58038 | Soybean | plasma membrane | 41.39 | 67.11 |
| GSMUA_Achr5P05070_001 | Banana | cytosol, peroxisome, plasma membrane | 59.84 | 64.6 |
| Solyc12g011070.1.1 | Tomato | plasma membrane | 44.88 | 64.04 |
| KRH46490 | Soybean | golgi, peroxisome, plasma membrane | 54.3 | 61.92 |
| PGSC0003DMT400079826 | Potato | cytosol, peroxisome, plasma membrane | 55.33 | 61.78 |
| CDY23589 | Canola | golgi, peroxisome, plasma membrane | 53.69 | 61.65 |
| Bra030840.1-P | Field mustard | plasma membrane | 51.43 | 61.07 |
| CDY42379 | Canola | plasma membrane | 51.23 | 60.83 |
| CDY10539 | Canola | plasma membrane | 51.02 | 60.58 |
| VIT_19s0015g01320.t01 | Wine grape | cytosol, peroxisome, vacuole | 55.33 | 60.54 |
| Solyc07g056110.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 55.94 | 60.4 |
| TraesCS2A01G506200.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 51.84 | 60.38 |
| CDY24195 | Canola | golgi, peroxisome, plasma membrane | 54.1 | 60.14 |
| AT1G55730.2 | Thale cress | plasma membrane | 54.3 | 60.09 |
| AT3G13320.1 | Thale cress | golgi, peroxisome, vacuole | 53.89 | 59.64 |
| CDY44007 | Canola | cytosol, peroxisome, plasma membrane | 53.69 | 59.55 |
| Bra034690.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 53.69 | 59.41 |
| CDY43356 | Canola | golgi, peroxisome, plasma membrane | 53.69 | 59.28 |
| TraesCS4A01G156500.1 | Wheat | cytosol, peroxisome, plasma membrane | 52.46 | 59.26 |
| KRG98412 | Soybean | plasma membrane | 54.1 | 58.28 |
| CDX75703 | Canola | peroxisome | 54.1 | 57.39 |
| CDY26090 | Canola | plasma membrane | 51.43 | 56.92 |
| GSMUA_Achr3P05320_001 | Banana | cytosol, peroxisome, plasma membrane | 53.07 | 56.43 |
| Bra039385.1-P | Field mustard | plasma membrane | 53.48 | 55.3 |
| AT1G55720.1 | Thale cress | plasma membrane | 52.05 | 54.39 |
| PGSC0003DMT400020114 | Potato | cytosol, peroxisome, plasma membrane | 50.61 | 54.29 |
| Bra001499.1-P | Field mustard | mitochondrion | 54.1 | 53.12 |
| CDX82545 | Canola | mitochondrion | 54.1 | 52.8 |
| Zm00001d015225_P001 | Maize | cytosol, endoplasmic reticulum, plasma membrane | 47.34 | 47.83 |
| KRH47395 | Soybean | mitochondrion | 20.29 | 44.8 |
| TraesCS2A01G444600.1 | Wheat | plasma membrane | 39.75 | 44.6 |
| TraesCS3A01G202800.1 | Wheat | plastid | 39.34 | 41.56 |
| KRH46489 | Soybean | cytosol, peroxisome, plasma membrane | 48.98 | 33.29 |
| VIT_12s0057g01500.t01 | Wine grape | cytosol, endoplasmic reticulum, plasma membrane | 57.17 | 25.29 |
Protein Annotations
| Gene3D:1.20.1420.30 | Gene3D:1.20.58.1130 | MapMan:24.2.9.1.1 | InterPro:CAX | InterPro:CaH_exchang | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0006816 | GO:GO:0008150 |
| GO:GO:0008324 | GO:GO:0015369 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:NaCa_Exmemb |
| PFAM:PF01699 | PANTHER:PTHR31503 | PANTHER:PTHR31503:SF34 | TIGRFAMs:TIGR00378 | TIGRFAMs:TIGR00846 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS6A01G108700 | EnsemblPlants:TraesCS6A01G108700.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6A:+:77533075..77535865
Molecular Weight (calculated)
52177.5 Da
IEP (calculated)
5.824
GRAVY (calculated)
0.426
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSTAAASGS DSRRLLPGRQ NSHQMDRING NGQKSATQAS TFSDGADEFD DDALIASEAL SCRTGGFERN AGPGNLGMFG SLKFVVLKSK LNLLIPCGFV
101: AIVVKDMTGN NGWVFPLTLL GIIPLAERLG FATEQLAFFT GPTVGGLLNA TFGNATELII SIHALRSGKL RVVQQSLLGS ILSNLLLVLG CAFFSGGVTC
201: GKTEQNFSKS EAVVSSGLLL MAVLGLLPPT VLHYTHSEVH SGKSGLALSR FSSCVMLVAY ACYIYFELTT SRRREESNEG RGENVGDADN IEAPDISKWE
301: AISWLAILTI WISVLSDYLV NAIDGASQAW NIPVAFISVI LLPIVGNAAE HASAVMFAMK DKLDLSLGVA IGSSTQMSMF GIPFCVVIGW MMGQPMDLNF
401: HLFETASLLM TVLVVAFLLQ DGTSNCLKGL MLFLCYLIVA ASFYVHSDQD PDGKFFTSAL PLPVLLSFRS KALHTALIKA TGFGYMVD
101: AIVVKDMTGN NGWVFPLTLL GIIPLAERLG FATEQLAFFT GPTVGGLLNA TFGNATELII SIHALRSGKL RVVQQSLLGS ILSNLLLVLG CAFFSGGVTC
201: GKTEQNFSKS EAVVSSGLLL MAVLGLLPPT VLHYTHSEVH SGKSGLALSR FSSCVMLVAY ACYIYFELTT SRRREESNEG RGENVGDADN IEAPDISKWE
301: AISWLAILTI WISVLSDYLV NAIDGASQAW NIPVAFISVI LLPIVGNAAE HASAVMFAMK DKLDLSLGVA IGSSTQMSMF GIPFCVVIGW MMGQPMDLNF
401: HLFETASLLM TVLVVAFLLQ DGTSNCLKGL MLFLCYLIVA ASFYVHSDQD PDGKFFTSAL PLPVLLSFRS KALHTALIKA TGFGYMVD
001: MYMELYLMFS NFFKSIRWCK VPAFMQAKVE MGLVNEVELK SLLEQETDSP QTNAASLMEQ GSLRERRAKA PRNSVVQSFK IVILSNKLNL LLPFGPLAIL
101: VHYLTDNKGW FFLLSLVGIT PLAERLGYAT EQLSCYTGAT VGGLLNATFG NVIELIISII ALKNGMIRVV QLTLLGSILS NILLVLGCAF FCGGLVFPGK
201: DQVFDKRNAV VSSGMLLMAV MGLLFPTFLH YTHSEVHAGS SELALSRFIS CIMLVAYAAY LFFQLKSQPS FYTEKTNQNE ETSNDDEDPE ISKWEAIIWL
301: SIFTAWVSLL SGYLVDAIEG TSVSWKIPIS FISVILLPIV GNAAEHAGAI MFAMKDKLDL SLGVAIGSSI QISMFAVPFC VVIGWMMGAQ MDLNLQLFET
401: ATLLITVIVV AFFLQLEGTS NYFKRLMLIL CYLIVAASFF VHEDPHQGTD HQQICTCRTP SYTYEIL
101: VHYLTDNKGW FFLLSLVGIT PLAERLGYAT EQLSCYTGAT VGGLLNATFG NVIELIISII ALKNGMIRVV QLTLLGSILS NILLVLGCAF FCGGLVFPGK
201: DQVFDKRNAV VSSGMLLMAV MGLLFPTFLH YTHSEVHAGS SELALSRFIS CIMLVAYAAY LFFQLKSQPS FYTEKTNQNE ETSNDDEDPE ISKWEAIIWL
301: SIFTAWVSLL SGYLVDAIEG TSVSWKIPIS FISVILLPIV GNAAEHAGAI MFAMKDKLDL SLGVAIGSSI QISMFAVPFC VVIGWMMGAQ MDLNLQLFET
401: ATLLITVIVV AFFLQLEGTS NYFKRLMLIL CYLIVAASFF VHEDPHQGTD HQQICTCRTP SYTYEIL
Arabidopsis Description
ATCAX6cation exchanger 6 [Source:TAIR;Acc:AT1G55720]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.