Factsheet for Bra039385.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000214.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13320.1	Bra000214.1-P	AT2G41090.1	17360592
AT3G13320.1	Bra000214.1-P	AT2G41100.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43356	Canola	golgi, peroxisome, plasma membrane	90.47	96.61
Bra034690.1-P	Field mustard	cytosol, peroxisome, plasma membrane	86.02	92.06
AT3G13320.1	Thale cress	golgi, peroxisome, vacuole	84.32	90.25
Bra001499.1-P	Field mustard	mitochondrion	87.5	83.1
Bra030840.1-P	Field mustard	plasma membrane	70.76	81.27
KRH58038	Soybean	plasma membrane	47.03	73.75
KRH46490	Soybean	golgi, peroxisome, plasma membrane	62.08	68.46
VIT_19s0015g01320.t01	Wine grape	cytosol, peroxisome, vacuole	64.62	68.39
Os02t0138900-01	Rice	golgi, plasma membrane	35.17	66.14
GSMUA_Achr5P05070_001	Banana	cytosol, peroxisome, plasma membrane	62.92	65.71
KRG98412	Soybean	plasma membrane	62.29	64.9
EES06255	Sorghum	golgi, peroxisome, plasma membrane	53.81	59.21
GSMUA_Achr3P05320_001	Banana	cytosol, peroxisome, plasma membrane	57.42	59.04
TraesCS6D01G096900.1	Wheat	mitochondrion	55.72	57.42
TraesCS6B01G137200.1	Wheat	mitochondrion	54.87	56.55
TraesCS6A01G108700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, peroxisome	55.3	53.48
KRH47395	Soybean	mitochondrion	22.25	47.51
Bra012833.1-P	Field mustard	golgi, plasma membrane, plastid	41.31	45.88
Bra005131.1-P	Field mustard	plasma membrane	41.1	41.72
Zm00001d015225_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	42.58	41.61
Bra017134.1-P	Field mustard	plasma membrane	40.68	41.29
KRH46489	Soybean	cytosol, peroxisome, plasma membrane	57.63	37.88
Bra009640.1-P	Field mustard	plastid	38.98	35.32

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	EnsemblPlantsGene:Bra039385	EnsemblPlants:Bra039385.1	EnsemblPlants:Bra039385.1-P
InterPro:CAX	InterPro:CaH_exchang	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150	GO:GO:0008324	GO:GO:0015369
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588	GO:GO:0098655	UniProt:M4FE64
InterPro:NaCa_Exmemb	PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF34	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846
TMHMM:TMhelix	UniParc:UPI000253E93E	:	:	:	:

Description

AT3G13320 (E=7e-224) CAX2, atcax2 | CAX2 (CATION EXCHANGER 2); calcium:cation antiporter/ calcium:hydrogen antiporter

Coordinates

chrScaffold000164:+:223191..225470

Molecular Weight (calculated)

51434.3 Da

IEP (calculated)

4.872

GRAVY (calculated)

0.565

Length

472 amino acids

Sequence
(BLAST)

001: MKSHTRSFSV PQVAPQPDAV SFLVVHVLVA REVMSHCNVP ALIEAQVEMG SANEVEQKTL FKLEEDAKQA KEASLMEQGG SLSPTFPPHT TKSPKNTVLK
101: SIRIVILSNK LNLLLPFGPL AILVHYMIDS KGWVFLLSLI GITPLAERLG YATEQLAFYT GPTVGGLLNA TFGNVTELII SIFALKNGMI RVVQLTLLGS
201: ILSNMLLVLG CAFFCGGLVF HQKDQVFDKG LAVVNSGLLL MAVMGILFPA VLHYTHSEVH AGSSELALSR FSSCIMLIAY AAYLFFQLKS QSSSYSPLEE
301: ETNQNEEASS DEDPEISKWE SIIWLSILTA WVSLLSGYLV DAIEGASVSW NIPIAFISVI LLPIVGNAAE HAGAIMFAMK DKLDLSLGVA IGSSIQISMF
401: AVPCCVVIGW MMGEQMDLNF QLFETAMLFI TVIVVAFFIQ EGTSNYFKGL MLILCYLIVA ASFFVHEDPQ QG

Best Arabidopsis Sequence Match ( AT3G13320.1 )
(BLAST)

001: MSCCKVPVLI EAQVEMVSAN ELENKSLFRQ EEDATQTKEA SLMEQGSLST SFPQHTPKAP KNSVLNSIKI VIFCNKLNLL LPFGPLAILV HYMIDSKGWV
101: FLLTLVGITP LAERLGYATE QLACYTGPTV GGLLNATFGN VTELIISIFA LKNGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFYQKD QVFDKGIATV
201: NSGLLLMAVM GILFPAVLHY THSEVHAGSS ELALSRFSSC IMLIAYAAYL FFQLKSQSNS YSPLDEESNQ NEETSAEDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWNIP IAFISTILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG QQMDLNFQLF ETAMLFITVI
401: VVAFFLQEGS SNYFKGLMLI LCYLIVAASF FVHEDPHQDG I

Arabidopsis Description

CAX2Vacuolar cation/proton exchanger 2 [Source:UniProtKB/Swiss-Prot;Acc:Q39254]
SUBAcon: [peroxisome,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.