Factsheet for GSMUA_Achr3P05320_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
vacuole 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P01120_001
GSMUA_Achr3P09330_001
GSMUA_Achr3P25040_001
GSMUA_Achr5P07820_001
GSMUA_Achr5P27590_001
GSMUA_Achr6P15990_001
GSMUA_Achr6P23670_001
GSMUA_Achr8P05790_001
GSMUA_Achr9P17280_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G13320.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr10P...	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr11P...	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr2P01120_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr3P09330_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr3P25040_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr5P07820_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr5P27590_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr6P15990_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr6P23670_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr8P05790_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr9P17280_001	AT2G41090.1	17360592
AT3G13320.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr10P...	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr11P...	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr2P01120_001	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr3P09330_001	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr3P25040_001	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr5P07820_001	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr5P27590_001	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr6P15990_001	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr6P23670_001	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr8P05790_001	AT2G41100.1	17360592
AT3G13320.1	GSMUA_Achr9P17280_001	AT2G41100.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P05070_001	Banana	cytosol, peroxisome, plasma membrane	76.25	77.43
KRH58038	Soybean	plasma membrane	49.89	76.08
Os02t0138900-01	Rice	golgi, plasma membrane	38.78	70.92
Solyc12g011070.1.1	Tomato	plasma membrane	51.2	68.71
GSMUA_Achr3P05680_001	Banana	plasma membrane	58.39	67.0
GSMUA_Achr11P...	Banana	golgi, peroxisome, plasma membrane	61.0	65.73
CDY23589	Canola	golgi, peroxisome, plasma membrane	60.78	65.65
VIT_19s0015g01320.t01	Wine grape	cytosol, peroxisome, vacuole	62.75	64.57
KRH46490	Soybean	golgi, peroxisome, plasma membrane	59.7	64.02
CDY44007	Canola	cytosol, peroxisome, plasma membrane	60.78	63.41
AT1G55730.2	Thale cress	plasma membrane	60.78	63.27
Bra034690.1-P	Field mustard	cytosol, peroxisome, plasma membrane	60.78	63.27
PGSC0003DMT400079826	Potato	cytosol, peroxisome, plasma membrane	60.13	63.16
CDY24195	Canola	golgi, peroxisome, plasma membrane	60.13	62.87
AT3G13320.1	Thale cress	golgi, peroxisome, vacuole	59.91	62.36
Bra030840.1-P	Field mustard	plasma membrane	55.56	62.04
CDY42379	Canola	plasma membrane	55.34	61.8
CDY43356	Canola	golgi, peroxisome, plasma membrane	59.48	61.76
CDY10539	Canola	plasma membrane	54.68	61.07
Solyc07g056110.2.1	Tomato	cytosol, peroxisome, plasma membrane	59.7	60.62
CDX75703	Canola	peroxisome	60.57	60.43
KRG98412	Soybean	plasma membrane	58.17	58.94
CDY26090	Canola	plasma membrane	56.21	58.5
PGSC0003DMT400020114	Potato	cytosol, peroxisome, plasma membrane	57.95	58.46
EES06255	Sorghum	golgi, peroxisome, plasma membrane	54.47	58.28
Bra039385.1-P	Field mustard	plasma membrane	59.04	57.42
TraesCS6B01G137200.1	Wheat	mitochondrion	56.64	56.77
TraesCS6D01G096900.1	Wheat	mitochondrion	56.64	56.77
AT1G55720.1	Thale cress	plasma membrane	57.52	56.53
Bra001499.1-P	Field mustard	mitochondrion	60.57	55.94
CDX82545	Canola	mitochondrion	60.57	55.6
TraesCS6A01G108700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, peroxisome	56.43	53.07
GSMUA_Achr4P06600_001	Banana	extracellular, golgi, vacuole	11.11	43.59
Zm00001d015225_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	43.57	41.41
GSMUA_Achr3P29210_001	Banana	golgi, peroxisome, plasma membrane	39.65	39.74
GSMUA_Achr8P19620_001	Banana	plasma membrane	33.99	37.59
GSMUA_Achr4P06590_001	Banana	cytosol, golgi, peroxisome	29.85	37.03
KRH47395	Soybean	mitochondrion	16.99	35.29
KRH46489	Soybean	cytosol, peroxisome, plasma membrane	53.59	34.26
VIT_12s0057g01500.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	63.18	26.29

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	InterPro:CAX	InterPro:CaH_exchang	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150
GO:GO:0008324	GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588
GO:GO:0098655	EnsemblPlantsGene:GSMUA_Achr3G05320_001	EnsemblPlants:GSMUA_Achr3P05320_001	EnsemblPlants:GSMUA_Achr3T05320_001	UniProt:M0SC00	InterPro:NaCa_Exmemb
PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF34	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846	TMHMM:TMhelix
UniParc:UPI000295D638	:	:	:	:	:

Description

Vacuolar cation/proton exchanger 5 [Source:GMGC_GENE;Acc:GSMUA_Achr3G05320_001]

Coordinates

chr3:+:3523715..3527788

Molecular Weight (calculated)

50247.5 Da

IEP (calculated)

6.185

GRAVY (calculated)

0.495

Length

459 amino acids

Sequence
(BLAST)

001: MGSMDGRSEH EFEDESLVSP MELTKMTNGL TGIHHGSFSA VEQQKSIDNI NTSLLRSLKV ILFTSKINIL MPCGPLAVVI HHLTEDQIRM GVLSELAGHY
101: SIGRAFRFCH RAASTFHRTN SFLAWYNYCG MLVGTYFKYT HAVGGLLNAT FGNATEMIIS VHALKGGMIR VVQQSLLGSI LSNMLLVLGC AFFCGGIVFM
201: KKDQVFDKAA AVVNSGLLLM AVMGLLFPAV LHYTHSEVHY GKSELALSRF SSCIMLVAYA FYLVFQLKGH NESYERVNEE GGQNEGGTDD EEVPEISKWE
301: AIIWLAILTG WISVLSDYLV DAIQGASAAW NIPIAFISVI LLPIVGNAAE HASAIMFAMK DKLDISLGVA IGSSTQISMF GIPFCVVVGW ILGRPMDLNF
401: QLFETASLFI TVLVVAFMLQ EGTSNYFKGL MLVLCYLIVA ASFFVHVDPS PVPFNTANV

Best Arabidopsis Sequence Match ( AT1G55730.2 )
(BLAST)

001: MGCCKVPALI QAQVEMGLVN DVEHKSLFRR DTDSPERKAA SLMEQGSLSA SFRECSTKTP NNSVLQSFKI VILSNKLNLL LPFGPLAILL HYLTDNKGWI
101: FLLSLVGITP LAERLGYATE QLACYTGSTV GGLLNATFGN VTELIISIFA LKSGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFSQKE QVFDKGNAVV
201: NSGLLLMAVM GLLFPAVLHY THSEVHAGSS ELALSRFSSC IMLVAYAAYL FFQLKSQPSS YTPLTEETNQ NEETSDDDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWKIP ISFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG AQMDLNFQLF ETATLFITVI
401: VVAFFLQEGT SNYFKGLMLI LCYLIVAASF FVHEDPHQDD I

Arabidopsis Description

CAX5Vacuolar cation/proton exchanger 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L783]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.