Factsheet for Solyc12g011070.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
endoplasmic reticulum 3
vacuole 3
extracellular 2
plasma membrane 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400020114	Potato	cytosol, peroxisome, plasma membrane	93.57	70.33
Os02t0138900-01	Rice	golgi, plasma membrane	47.66	64.94
Solyc03g123790.2.1	Tomato	plasma membrane	66.96	59.79
Solyc07g056110.2.1	Tomato	cytosol, peroxisome, plasma membrane	78.95	59.73
Solyc12g055750.1.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	67.84	53.46
GSMUA_Achr5P05070_001	Banana	cytosol, peroxisome, plasma membrane	70.47	53.32
GSMUA_Achr3P05320_001	Banana	cytosol, peroxisome, plasma membrane	68.71	51.2
EES06255	Sorghum	golgi, peroxisome, plasma membrane	62.28	49.65
TraesCS6D01G096900.1	Wheat	mitochondrion	63.45	47.38
TraesCS6B01G137200.1	Wheat	mitochondrion	63.16	47.16
TraesCS6A01G108700.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, peroxisome	64.04	44.88
Zm00001d015225_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	54.68	38.72
Solyc06g006110.2.1	Tomato	cytosol, peroxisome, plasma membrane	46.78	37.83
Solyc09g005260.2.1	Tomato	plastid	47.95	36.12
VIT_12s0057g01500.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	73.39	22.76
Solyc12g011080.1.1	Tomato	cytosol	0.58	2.35

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	InterPro:CAX	InterPro:CaH_exchang	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150	GO:GO:0008324	GO:GO:0009705
GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588	GO:GO:0098655
UniProt:K4DCJ3	InterPro:NaCa_Exmemb	PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF34	EnsemblPlantsGene:Solyc12g011070.1
EnsemblPlants:Solyc12g011070.1.1	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI000276A184	:

Description

No Description!

Coordinates

chr12:-:3934003..3937037

Molecular Weight (calculated)

37353.4 Da

IEP (calculated)

4.872

GRAVY (calculated)

0.761

Length

342 amino acids

Sequence
(BLAST)

001: MALYLANIIS INLQLKTFTV GGLLNATFGN ATELIISMYA LKSGMIRVVQ QSLLGSILSN TLLVLGCAFF GGGIVHSNKE QLFDKGTAGM NSGLLLMAVM
101: CLLFPAVLHV THTEVHFGKS ELALSRFSSC IMLIAYGAYL LFQLTNQKNL YMPMAEEEDH IDGSADDEET PEISKWWSIL WLSVMTLWIA VLSEYLVNTV
201: EGASVAMNIP VAFISVVVLP IVGNAAEHAG AVMFACKDKL DISLGVAIGS STQIAMFGIP FCVVVGWIIG SPMNLDFQMF ETATLFMTVL VVAFMLQDGT
301: SNYFKGLMLL FCYLIVAASF FVHIDPESIR KFPPSLHTII IW

Best Arabidopsis Sequence Match ( AT1G55730.2 )
(BLAST)

001: MGCCKVPALI QAQVEMGLVN DVEHKSLFRR DTDSPERKAA SLMEQGSLSA SFRECSTKTP NNSVLQSFKI VILSNKLNLL LPFGPLAILL HYLTDNKGWI
101: FLLSLVGITP LAERLGYATE QLACYTGSTV GGLLNATFGN VTELIISIFA LKSGMIRVVQ LTLLGSILSN MLLVLGCAFF CGGLVFSQKE QVFDKGNAVV
201: NSGLLLMAVM GLLFPAVLHY THSEVHAGSS ELALSRFSSC IMLVAYAAYL FFQLKSQPSS YTPLTEETNQ NEETSDDDED PEISKWEAII WLSILTAWVS
301: LLSGYLVDAI EGASVSWKIP ISFISVILLP IVGNAAEHAG AIMFAMKDKL DLSLGVAIGS SIQISMFAVP FCVVIGWMMG AQMDLNFQLF ETATLFITVI
401: VVAFFLQEGT SNYFKGLMLI LCYLIVAASF FVHEDPHQDD I

Arabidopsis Description

CAX5Vacuolar cation/proton exchanger 5 [Source:UniProtKB/Swiss-Prot;Acc:Q8L783]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.