Factsheet for Solyc06g006110.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010643	Potato	plasma membrane	97.4	96.71
KRH30353	Soybean	golgi, plasma membrane, vacuole	29.79	69.23
VIT_06s0004g06570.t01	Wine grape	cytosol, peroxisome, plasma membrane	70.69	67.04
KRH17032	Soybean	golgi, peroxisome, plasma membrane	68.09	65.16
Solyc09g005260.2.1	Tomato	plastid	69.03	64.32
KRG98293	Soybean	cytosol, peroxisome, plasma membrane	66.19	64.22
KRH72673	Soybean	golgi, peroxisome, plasma membrane	67.61	63.56
GSMUA_Achr3P29210_001	Banana	golgi, peroxisome, plasma membrane	64.78	59.83
OQU86993	Sorghum	plasma membrane	43.74	59.68
GSMUA_Achr4P06590_001	Banana	cytosol, golgi, peroxisome	51.54	58.92
KRH38323	Soybean	endoplasmic reticulum, extracellular, vacuole	8.98	57.58
TraesCS2A01G444600.1	Wheat	plasma membrane	58.63	57.01
TraesCS3D01G206400.1	Wheat	plastid	61.47	56.28
TraesCS3A01G202800.1	Wheat	plastid	61.47	56.28
Os01t0557500-01	Rice	vacuole	59.81	56.1
Zm00001d044533_P003	Maize	golgi, mitochondrion, peroxisome, plasma membrane, plastid	60.99	55.84
TraesCS2D01G443700.2	Wheat	plasma membrane	57.45	54.98
HORVU2Hr1G102840.16	Barley	endoplasmic reticulum, plasma membrane	58.87	54.73
GSMUA_Achr8P19620_001	Banana	plasma membrane	53.19	54.22
TraesCS2B01G465600.1	Wheat	plastid	58.63	53.91
Os05t0594200-01	Rice	plastid	56.5	52.76
Os02t0314300-00	Rice	cytosol, peroxisome, vacuole	54.85	51.56
Zm00001d009397_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	11.58	51.04
Solyc03g123790.2.1	Tomato	plasma membrane	46.1	50.91
HORVU3Hr1G049060.8	Barley	endoplasmic reticulum, peroxisome, plasma membrane, plastid	56.97	50.84
EES04904	Sorghum	cytosol, peroxisome, vacuole	52.96	48.91
KXG22713	Sorghum	plasma membrane	57.68	48.61
Zm00001d009763_P001	Maize	cytosol, mitochondrion, plasma membrane, plastid	58.16	47.67
Solyc12g011070.1.1	Tomato	plasma membrane	37.83	46.78
Solyc12g055750.1.1	Tomato	endoplasmic reticulum, peroxisome, plasma membrane	46.57	45.39
Solyc07g056110.2.1	Tomato	cytosol, peroxisome, plasma membrane	47.04	44.03
Solyc12g011080.1.1	Tomato	cytosol	5.67	28.24

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	InterPro:CAX	InterPro:CaH_exchang	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150	GO:GO:0008324	GO:GO:0009705
GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588	GO:GO:0098655
UniProt:K4C393	InterPro:NaCa_Exmemb	PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF1	EnsemblPlantsGene:Solyc06g006110.2
EnsemblPlants:Solyc06g006110.2.1	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846	TMHMM:TMhelix	UniParc:UPI0002765F35	SEG:seg

Description

No Description!

Coordinates

chr6:+:1143219..1150108

Molecular Weight (calculated)

46392.4 Da

IEP (calculated)

5.381

GRAVY (calculated)

0.617

Length

423 amino acids

Sequence
(BLAST)

001: MGSLRDLEHN VGEELDRKND EEIIMKKKKN AQLFRILLVN IQEVILGTKL CLLLPAIPLA ILAQYYHFAR PWIFAFSLLG LAPLAERVSF LTEQIAHFTG
101: PTVGGLLNAT CGNATEMIIG LFALYQRKIH VLKYSLLGSI LSNLLLVLGS SLFCGGLANI KKEQTFDRKQ ADVNSLLLLL GLLCHMLPLM YRLALGPSIN
201: NNVATSILGL SRVSSIGMLI AYAAYLFFQL KTHRQFFESS EEEEEENKVS EDEEAVIGFW SSFAWLIGMT ITIALLSEYV VGTIEAASDS WGISVSFISL
301: ILLPIVGNAA EHAGSIIFAL KNKLDISLGV ALGSASQISM FVVPLCVIMG WIIGVDMDLD FSILETGSLA FSIILIAFTL QDGTSHYMKG IILCLAYCVI
401: GACFFFHKIP INIENYSSGI MSS

Best Arabidopsis Sequence Match ( AT3G51860.1 )
(BLAST)

001: MGSIVEPWAA IAENGNANVT AKGSSRELRH GRTAHNMSSS SLRKKSDLRL VQKVPCKTLK NILSNLQEVI LGTKLTLLFL AIPLAILANS YNYGRPLIFG
101: LSLIGLTPLA ERVSFLTEQL AFYTGPTVGG LLNATCGNAT ELIIAILALA NNKVAVVKYS LLGSILSNLL LVLGTSLFFG GIANIRREQR FDRKQADVNF
201: FLLLMGLLCH LLPLLLKYAA TGEVSTSMIN KMSLTLSRTS SIVMLIAYIA YLIFQLWTHR QLFEAQQDDD DAYDDEVSVE ETPVIGFWSG FAWLVGMTIV
301: IALLSEYVVD TIEDASDSWG LSVSFISIIL LPIVGNAAEH AGAIIFAFKN KLDISLGVAL GSATQISLFV VPLSVIVAWI LGIKMDLNFN ILETSSLALA
401: IIITAFTLQD GTSHYMKGLV LLLCYVIIAA CFFVDQIPQP NDLDVGLQPM NNLGEVFSA

Arabidopsis Description

CAX3Cation exchanger 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.