Factsheet for PGSC0003DMT400010643

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
vacuole 2
extracellular 1
golgi 1
plasma membrane 3
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g006110.2.1	Tomato	cytosol, peroxisome, plasma membrane	96.71	97.4
KRH30353	Soybean	golgi, plasma membrane, vacuole	29.58	69.23
VIT_06s0004g06570.t01	Wine grape	cytosol, peroxisome, plasma membrane	70.19	67.04
KRH17032	Soybean	golgi, peroxisome, plasma membrane	68.08	65.61
PGSC0003DMT400030772	Potato	plasma membrane, plastid	69.01	64.47
KRG98293	Soybean	cytosol, peroxisome, plasma membrane	65.73	64.22
KRH72673	Soybean	golgi, peroxisome, plasma membrane	67.37	63.78
GSMUA_Achr3P29210_001	Banana	golgi, peroxisome, plasma membrane	64.32	59.83
OQU86993	Sorghum	plasma membrane	42.96	59.03
GSMUA_Achr4P06590_001	Banana	cytosol, golgi, peroxisome	50.47	58.11
KRH38323	Soybean	endoplasmic reticulum, extracellular, vacuole	8.92	57.58
TraesCS2A01G444600.1	Wheat	plasma membrane	57.51	56.32
TraesCS3D01G206400.1	Wheat	plastid	60.56	55.84
TraesCS3A01G202800.1	Wheat	plastid	60.56	55.84
Os01t0557500-01	Rice	vacuole	58.45	55.21
Zm00001d044533_P003	Maize	golgi, mitochondrion, peroxisome, plasma membrane, plastid	59.86	55.19
TraesCS2D01G443700.2	Wheat	plasma membrane	56.34	54.3
HORVU2Hr1G102840.16	Barley	endoplasmic reticulum, plasma membrane	57.75	54.07
GSMUA_Achr8P19620_001	Banana	plasma membrane	52.58	53.98
TraesCS2B01G465600.1	Wheat	plastid	57.51	53.26
Os05t0594200-01	Rice	plastid	55.4	52.1
Os02t0314300-00	Rice	cytosol, peroxisome, vacuole	53.99	51.11
Zm00001d009397_P001	Maize	endoplasmic reticulum, extracellular, mitochondrion, plasma membrane	11.5	51.04
HORVU3Hr1G049060.8	Barley	endoplasmic reticulum, peroxisome, plasma membrane, plastid	56.1	50.42
EES04904	Sorghum	cytosol, peroxisome, vacuole	52.11	48.47
KXG22713	Sorghum	plasma membrane	56.57	48.01
Zm00001d009763_P001	Maize	cytosol, mitochondrion, plasma membrane, plastid	56.81	46.9
PGSC0003DMT400023736	Potato	golgi, peroxisome, plasma membrane	45.77	44.93
PGSC0003DMT400079826	Potato	cytosol, peroxisome, plasma membrane	45.77	44.62
PGSC0003DMT400020114	Potato	cytosol, peroxisome, plasma membrane	44.37	41.54

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	EntrezGene:102596079	MapMan:24.2.9.1.1	InterPro:CAX	InterPro:CaH_exchang
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816
GO:GO:0008150	GO:GO:0008324	GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
GO:GO:0070588	GO:GO:0098655	UniProt:M0ZYD0	InterPro:NaCa_Exmemb	PFAM:PF01699	EnsemblPlantsGene:PGSC0003DMG400004158
PGSC:PGSC0003DMG400004158	EnsemblPlants:PGSC0003DMT400010643	PANTHER:PTHR31503	PANTHER:PTHR31503:SF1	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846
TMHMM:TMhelix	UniParc:UPI000295C0E0	RefSeq:XP_006344115.1	SEG:seg	:	:

Description

Ca2+ antiporter/cation exchanger [Source:PGSC_GENE;Acc:PGSC0003DMG400004158]

Coordinates

chr6:-:3353777..3362834

Molecular Weight (calculated)

46827.9 Da

IEP (calculated)

5.400

GRAVY (calculated)

0.592

Length

426 amino acids

Sequence
(BLAST)

001: MGSLRDLENN VGEELERKND EEIIMKKKKN AQIFRILLVN FQEVILGTKL CLLLPAIPLA ILAQYYHFAR PWIFAFSLLG LAPLAERVSF LTEQIAHFTG
101: PTVGGLLNAT CGNATEMIIG LFALYQRKIH VLKYSLLGSI LSNLLLVLGS SLFCGGLANI KKEQRFDRKQ ADVNSLLLLL GLLCHMLPLM YRLALGPSIN
201: NINNNVATSI LGLSRVSSIG MLIAYAAYLF FQLKTHRQFF ESPEEEEEEN KVSEDEEAVI GFWSSFAWLI GMTITIALLS EYVVGTIEAA SDSWGISVSF
301: ISLIVLPIVG NAAEHAGSII FALKNKLDIS LGVALGSASQ ISMFVVPLCV IMGWIIGVDM DLDFSILETG SLAFSIILIA FTLQDGTSHY MKGVILCLAY
401: CAIGACFFFH KIPINIENYS YGIMSA

Best Arabidopsis Sequence Match ( AT3G51860.1 )
(BLAST)

001: MGSIVEPWAA IAENGNANVT AKGSSRELRH GRTAHNMSSS SLRKKSDLRL VQKVPCKTLK NILSNLQEVI LGTKLTLLFL AIPLAILANS YNYGRPLIFG
101: LSLIGLTPLA ERVSFLTEQL AFYTGPTVGG LLNATCGNAT ELIIAILALA NNKVAVVKYS LLGSILSNLL LVLGTSLFFG GIANIRREQR FDRKQADVNF
201: FLLLMGLLCH LLPLLLKYAA TGEVSTSMIN KMSLTLSRTS SIVMLIAYIA YLIFQLWTHR QLFEAQQDDD DAYDDEVSVE ETPVIGFWSG FAWLVGMTIV
301: IALLSEYVVD TIEDASDSWG LSVSFISIIL LPIVGNAAEH AGAIIFAFKN KLDISLGVAL GSATQISLFV VPLSVIVAWI LGIKMDLNFN ILETSSLALA
401: IIITAFTLQD GTSHYMKGLV LLLCYVIIAA CFFVDQIPQP NDLDVGLQPM NNLGEVFSA

Arabidopsis Description

CAX3Cation exchanger 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.