Factsheet for GSMUA_Achr3P29210_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

plastid 1
golgi 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
MultiLoc:	golgi
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P06590_001	Banana	cytosol, golgi, peroxisome	66.38	82.16
GSMUA_Achr4P06600_001	Banana	extracellular, golgi, vacuole	19.87	77.78
KRH30353	Soybean	golgi, plasma membrane, vacuole	28.17	70.88
VIT_06s0004g06570.t01	Wine grape	cytosol, peroxisome, plasma membrane	67.47	69.28
VIT_08s0007g02240.t01	Wine grape	golgi, peroxisome, plasma membrane	67.47	68.97
KRH38810	Soybean	extracellular, golgi, vacuole	36.9	68.7
CDY29050	Canola	golgi, plasma membrane, plastid	62.66	67.53
PGSC0003DMT400030772	Potato	plasma membrane, plastid	67.03	67.32
KRH65744	Soybean	golgi, peroxisome, plasma membrane	66.16	67.18
Bra012833.1-P	Field mustard	golgi, plasma membrane, plastid	62.23	67.06
Solyc09g005260.2.1	Tomato	plastid	66.38	66.96
KRH38323	Soybean	endoplasmic reticulum, extracellular, vacuole	9.61	66.67
KRH75989	Soybean	golgi, peroxisome, plasma membrane	66.16	66.45
KRH00226	Soybean	plastid	64.85	66.15
KRH65739	Soybean	plastid	64.19	65.92
KRH49368	Soybean	plastid	63.97	65.26
CDX90630	Canola	golgi, peroxisome, plasma membrane, plastid	65.5	65.22
KRH17032	Soybean	golgi, peroxisome, plasma membrane	62.88	65.16
KRG98293	Soybean	cytosol, peroxisome, plasma membrane	62.01	65.14
Solyc06g006110.2.1	Tomato	cytosol, peroxisome, plasma membrane	59.83	64.78
PGSC0003DMT400010643	Potato	plasma membrane	59.83	64.32
CDX74903	Canola	golgi, peroxisome, plasma membrane, plastid	65.07	64.09
Bra005131.1-P	Field mustard	plasma membrane	65.07	64.09
CDX91434	Canola	plasma membrane	64.85	63.87
CDY18402	Canola	plasma membrane	64.63	63.66
Bra017134.1-P	Field mustard	plasma membrane	64.63	63.66
KRH72673	Soybean	golgi, peroxisome, plasma membrane	62.45	63.56
CDX93324	Canola	plasma membrane	64.41	63.44
GSMUA_Achr8P19620_001	Banana	plasma membrane	55.24	60.96
AT3G51860.2	Thale cress	plastid	62.01	60.68
AT2G38170.3	Thale cress	plasma membrane, plastid	62.88	60.63
AT5G01490.1	Thale cress	plastid	56.11	56.61
CDY40303	Canola	plastid	56.33	52.87
CDY10497	Canola	plastid	43.01	50.9
Bra009640.1-P	Field mustard	plastid	55.24	48.56
GSMUA_Achr3P05680_001	Banana	plasma membrane	40.61	46.5
GSMUA_Achr11P...	Banana	golgi, peroxisome, plasma membrane	42.36	45.54
GSMUA_Achr5P05070_001	Banana	cytosol, peroxisome, plasma membrane	43.01	43.58
GSMUA_Achr3P05320_001	Banana	cytosol, peroxisome, plasma membrane	39.74	39.65
KRH32678	Soybean	mitochondrion, plasma membrane	17.47	36.2

Protein Annotations

Gene3D:1.20.1420.30	Gene3D:1.20.58.1130	MapMan:24.2.9.1.1	InterPro:CAX	InterPro:CaH_exchang	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812	GO:GO:0006816	GO:GO:0008150
GO:GO:0008324	GO:GO:0015369	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:0070588
GO:GO:0098655	EnsemblPlantsGene:GSMUA_Achr3G29210_001	EnsemblPlants:GSMUA_Achr3P29210_001	EnsemblPlants:GSMUA_Achr3T29210_001	UniProt:M0SIT7	InterPro:NaCa_Exmemb
PFAM:PF01699	PANTHER:PTHR31503	PANTHER:PTHR31503:SF1	TIGRFAMs:TIGR00378	TIGRFAMs:TIGR00846	TMHMM:TMhelix
UniParc:UPI0002966EE7	SEG:seg	:	:	:	:

Description

Vacuolar cation/proton exchanger 1a [Source:GMGC_GENE;Acc:GSMUA_Achr3G29210_001]

Coordinates

chr3:+:28436032..28438907

Molecular Weight (calculated)

48803.7 Da

IEP (calculated)

6.442

GRAVY (calculated)

0.563

Length

458 amino acids

Sequence
(BLAST)

001: MASTGYEAAR RLEAGNPKGG SGSRTAHGHG HGRTAHNMSS SSLRKKSDLS LLSKVRCGLL RTILTNLQEI FLGTKLFILF PAVPLAIAAN YLHFGRAWLF
101: ALSLLGLTPL AERVSFLTEQ IAYYTGPTVG GLLNATCGNA TELIIALFAL HRGKIEVVKC SLVGSILSNL LLVLGSSLFL GGIANLHKEQ SFDRKQADVN
201: TGLLLLGALC HILLLAFDHA VSSGEQAADA APRLWLSRAC SIVMLLAYVA YLFFQLKTHR QLYESEEEQD DDNDDAVAQD EAVIGFPSAL AWLLGMTAVI
301: AILSEYVVAT IEAASDSWGI SVSFISIILL PIVGNAAEHA GAIIFAFKNK LDITLGVSLG SATQISMFVV PLSVIVAWIM GIKMDLDLEL LETGSLIMAI
401: LITAFTLQDG TSHYLKGLVP LLCYLAIGAC FFVSKSPANQ IHDVNAGVLT TSTGVTVA

Best Arabidopsis Sequence Match ( AT3G51860.1 )
(BLAST)

001: MGSIVEPWAA IAENGNANVT AKGSSRELRH GRTAHNMSSS SLRKKSDLRL VQKVPCKTLK NILSNLQEVI LGTKLTLLFL AIPLAILANS YNYGRPLIFG
101: LSLIGLTPLA ERVSFLTEQL AFYTGPTVGG LLNATCGNAT ELIIAILALA NNKVAVVKYS LLGSILSNLL LVLGTSLFFG GIANIRREQR FDRKQADVNF
201: FLLLMGLLCH LLPLLLKYAA TGEVSTSMIN KMSLTLSRTS SIVMLIAYIA YLIFQLWTHR QLFEAQQDDD DAYDDEVSVE ETPVIGFWSG FAWLVGMTIV
301: IALLSEYVVD TIEDASDSWG LSVSFISIIL LPIVGNAAEH AGAIIFAFKN KLDISLGVAL GSATQISLFV VPLSVIVAWI LGIKMDLNFN ILETSSLALA
401: IIITAFTLQD GTSHYMKGLV LLLCYVIIAA CFFVDQIPQP NDLDVGLQPM NNLGEVFSA

Arabidopsis Description

CAX3Cation exchanger 3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSS9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.